RNA–Protein interactions for RNA: ENST00000638047.1

LINC01876-209, Transcript of long intergenic non-protein coding RNA 1876, humanhuman

TSL 5 BASIC

Gene LINC01876, Length 1,983 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01876-209ENST00000638047 NUCB1Q02818 461 aa8.41□□□□□ -1.06
LINC01876-209ENST00000638047 SPDYE2Q495Y8 402 aa8.41□□□□□ -1.06
LINC01876-209ENST00000638047 HABP4Q5JVS0 413 aaKnown RBP8.41□□□□□ -1.06
LINC01876-209ENST00000638047 ANKRD45Q5TZF3 282 aa8.41□□□□□ -1.06
LINC01876-209ENST00000638047 NBPF11Q86T75 865 aa8.41□□□□□ -1.06
LINC01876-209ENST00000638047 SSH3Q8TE77 659 aa8.41□□□□□ -1.06
LINC01876-209ENST00000638047 TMEM106CQ9BVX2 250 aa8.41□□□□□ -1.06
LINC01876-209ENST00000638047 ZFYVE28Q9HCC9 887 aa8.41□□□□□ -1.06
LINC01876-209ENST00000638047 CRHR2Q13324 411 aa8.4□□□□□ -1.06
LINC01876-209ENST00000638047 RASA3Q14644 834 aa8.4□□□□□ -1.06
LINC01876-209ENST00000638047 CCDC57Q2TAC2 916 aa8.4□□□□□ -1.06
LINC01876-209ENST00000638047 NBPF12Q5TAG4 269 aaPredicted RBP8.4□□□□□ -1.06
LINC01876-209ENST00000638047 ERICH6Q7L0X2 663 aa8.4□□□□□ -1.06
LINC01876-209ENST00000638047 TDRD7Q8NHU6 1098 aaKnown RBP8.4□□□□□ -1.06
LINC01876-209ENST00000638047 CLMNQ96JQ2 1002 aa8.4□□□□□ -1.06
LINC01876-209ENST00000638047 PRMT6Q96LA8 375 aaPredicted RBP8.4□□□□□ -1.06
LINC01876-209ENST00000638047 LNPKQ9C0E8 428 aa8.4□□□□□ -1.06
LINC01876-209ENST00000638047 GABBR2O75899 941 aa8.39□□□□□ -1.07
LINC01876-209ENST00000638047 CAPN2P17655 700 aa8.39□□□□□ -1.07
LINC01876-209ENST00000638047 RFX5P48382 616 aaPredicted RBP8.39□□□□□ -1.07
LINC01876-209ENST00000638047 MAP3K9P80192 1104 aa8.39□□□□□ -1.07
LINC01876-209ENST00000638047 TAF7LQ5H9L4 462 aa8.39□□□□□ -1.07
LINC01876-209ENST00000638047 CD99L2Q8TCZ2 262 aa8.39□□□□□ -1.07
LINC01876-209ENST00000638047 TBC1D22AQ8WUA7 517 aa8.39□□□□□ -1.07
LINC01876-209ENST00000638047 MRIQ9BWK5 157 aa8.39□□□□□ -1.07
LINC01876-209ENST00000638047 CHMP4BQ9H444 224 aaKnown RBP8.39□□□□□ -1.07
LINC01876-209ENST00000638047 VEZTQ9HBM0 779 aa8.39□□□□□ -1.07
LINC01876-209ENST00000638047 ZNF70Q9UC06 446 aaPredicted RBP8.39□□□□□ -1.07
LINC01876-209ENST00000638047 CLRN2A0PK11 232 aa8.39□□□□□ -1.07
LINC01876-209ENST00000638047 POTEFA5A3E0 1075 aa8.39□□□□□ -1.07
LINC01876-209ENST00000638047 TNRC18O15417 2968 aaPredicted RBP8.39□□□□□ -1.07
LINC01876-209ENST00000638047 SRGAP3O43295 1099 aa8.39□□□□□ -1.07
LINC01876-209ENST00000638047 GJA5P36382 358 aa8.39□□□□□ -1.07
LINC01876-209ENST00000638047 RBM5P52756 815 aaKnown RBP eCLIP8.39□□□□□ -1.07
LINC01876-209ENST00000638047 MTX1Q13505 466 aa8.39□□□□□ -1.07
LINC01876-209ENST00000638047 FKBP1CQ5VVH2 108 aa8.39□□□□□ -1.07
LINC01876-209ENST00000638047 LDHAL6AQ6ZMR3 332 aa8.39□□□□□ -1.07
LINC01876-209ENST00000638047 OPTNQ96CV9 577 aa8.39□□□□□ -1.07
LINC01876-209ENST00000638047 ZNF333Q96JL9 665 aa8.39□□□□□ -1.07
LINC01876-209ENST00000638047 MS4A4AQ96JQ5 239 aa8.39□□□□□ -1.07
LINC01876-209ENST00000638047 CNNM1Q9NRU3 951 aa8.39□□□□□ -1.07
LINC01876-209ENST00000638047 SUGT1Q9Y2Z0 365 aa8.39□□□□□ -1.07
LINC01876-209ENST00000638047 CSADQ9Y600 493 aa8.39□□□□□ -1.07
LINC01876-209ENST00000638047 RPAP1Q9BWH6 1393 aaPredicted RBP8.38□□□□□ -1.07
LINC01876-209ENST00000638047 MAST3O60307 1309 aa8.38□□□□□ -1.07
LINC01876-209ENST00000638047 TAF5LO75529 589 aa8.38□□□□□ -1.07
LINC01876-209ENST00000638047 HIBADHP31937 336 aaKnown RBP8.38□□□□□ -1.07
LINC01876-209ENST00000638047 KIF22Q14807 665 aa8.38□□□□□ -1.07
LINC01876-209ENST00000638047 MFSD14BQ5SR56 506 aa8.38□□□□□ -1.07
LINC01876-209ENST00000638047 LMBR1LQ6UX01 489 aa8.38□□□□□ -1.07
LINC01876-209ENST00000638047 CHD1LQ86WJ1 897 aa8.38□□□□□ -1.07
LINC01876-209ENST00000638047 MROH5Q6ZUA9 1318 aa8.37□□□□□ -1.07
LINC01876-209ENST00000638047 F8W031 263 aaPredicted RBP8.37□□□□□ -1.07
LINC01876-209ENST00000638047 CETPP11597 493 aa8.37□□□□□ -1.07
LINC01876-209ENST00000638047 TAF1CQ15572 869 aaPredicted RBP8.37□□□□□ -1.07
LINC01876-209ENST00000638047 RABL6Q3YEC7 729 aaPredicted RBP8.37□□□□□ -1.07
LINC01876-209ENST00000638047 FAM83AQ86UY5 434 aa8.37□□□□□ -1.07
LINC01876-209ENST00000638047 HELBQ8NG08 1087 aaPredicted RBP8.37□□□□□ -1.07
LINC01876-209ENST00000638047 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.37□□□□□ -1.07
LINC01876-209ENST00000638047 TEPSINQ96N21 525 aa8.37□□□□□ -1.07
LINC01876-209ENST00000638047 PTPN18Q99952 460 aa8.37□□□□□ -1.07
LINC01876-209ENST00000638047 TTF2Q9UNY4 1162 aaKnown RBP8.37□□□□□ -1.07
LINC01876-209ENST00000638047 CHMP3Q9Y3E7 222 aa8.37□□□□□ -1.07
LINC01876-209ENST00000638047 CCL15-CCL14A0A0B4J2E2 113 aa8.37□□□□□ -1.07
LINC01876-209ENST00000638047 SPDYE5A6NIY4 337 aa8.37□□□□□ -1.07
LINC01876-209ENST00000638047 SURF6O75683 361 aaKnown RBP8.37□□□□□ -1.07
LINC01876-209ENST00000638047 CRKP46108 304 aa8.37□□□□□ -1.07
LINC01876-209ENST00000638047 CCL15Q16663 113 aa8.37□□□□□ -1.07
LINC01876-209ENST00000638047 SLC9C1Q4G0N8 1177 aa8.37□□□□□ -1.07
LINC01876-209ENST00000638047 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.37□□□□□ -1.07
LINC01876-209ENST00000638047 ERO1BQ86YB8 467 aa8.37□□□□□ -1.07
LINC01876-209ENST00000638047 BRI3BPQ8WY22 251 aa8.37□□□□□ -1.07
LINC01876-209ENST00000638047 ZNF594Q96JF6 807 aaPredicted RBP8.37□□□□□ -1.07
LINC01876-209ENST00000638047 ELP3Q9H9T3 547 aa8.37□□□□□ -1.07
LINC01876-209ENST00000638047 TMOD2Q9NZR1 351 aa8.37□□□□□ -1.07
LINC01876-209ENST00000638047 TSHZ3Q63HK5 1081 aa8.36□□□□□ -1.07
LINC01876-209ENST00000638047 DCAF15Q66K64 600 aa8.36□□□□□ -1.07
LINC01876-209ENST00000638047 FBXO33Q7Z6M2 555 aa8.36□□□□□ -1.07
LINC01876-209ENST00000638047 PLEKHM2Q8IWE5 1019 aa8.36□□□□□ -1.07
LINC01876-209ENST00000638047 FAM84BQ96KN1 310 aaPredicted RBP8.36□□□□□ -1.07
LINC01876-209ENST00000638047 PUS3Q9BZE2 481 aaKnown RBP8.36□□□□□ -1.07
LINC01876-209ENST00000638047 TDRD3Q9H7E2 651 aaKnown RBP8.36□□□□□ -1.07
LINC01876-209ENST00000638047 IL1RAPL2Q9NP60 686 aa8.36□□□□□ -1.07
LINC01876-209ENST00000638047 FZD1Q9UP38 647 aa8.36□□□□□ -1.07
LINC01876-209ENST00000638047 NOP58Q9Y2X3 529 aaKnown RBP8.36□□□□□ -1.07
LINC01876-209ENST00000638047 TLR2O60603 784 aa8.35□□□□□ -1.07
LINC01876-209ENST00000638047 EN2P19622 333 aaPredicted RBP8.35□□□□□ -1.07
LINC01876-209ENST00000638047 HOXD10P28358 340 aa8.35□□□□□ -1.07
LINC01876-209ENST00000638047 PPIL2Q13356 520 aa8.35□□□□□ -1.07
LINC01876-209ENST00000638047 SNAPC2Q13487 334 aa8.35□□□□□ -1.07
LINC01876-209ENST00000638047 VGLL4Q14135 290 aa8.35□□□□□ -1.07
LINC01876-209ENST00000638047 CAVIN4Q5BKX8 364 aa8.35□□□□□ -1.07
LINC01876-209ENST00000638047 NKX2-3Q8TAU0 364 aa8.35□□□□□ -1.07
LINC01876-209ENST00000638047 TEKT1Q969V4 418 aa8.35□□□□□ -1.07
LINC01876-209ENST00000638047 SIL1Q9H173 461 aa8.35□□□□□ -1.07
LINC01876-209ENST00000638047 PCDHAC2Q9Y5I4 1007 aa8.35□□□□□ -1.07
LINC01876-209ENST00000638047 KIAA0100Q14667 2235 aaKnown RBP8.35□□□□□ -1.07
LINC01876-209ENST00000638047 C19orf67A6NJJ6 358 aa8.35□□□□□ -1.07
LINC01876-209ENST00000638047 SNAP23O00161 211 aa8.35□□□□□ -1.07
LINC01876-209ENST00000638047 HHIPL2Q6UWX4 724 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms