RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 CTU1Q7Z7A3 348 aaKnown RBP23.38■■□□□ 1.33
CLN6-213ENST00000636212 IFNL1Q8IU54 200 aa23.38■■□□□ 1.33
CLN6-213ENST00000636212 RPAP1Q9BWH6 1393 aaPredicted RBP23.38■■□□□ 1.33
CLN6-213ENST00000636212 ATP8B2P98198 1209 aa23.37■■□□□ 1.33
CLN6-213ENST00000636212 NOM1Q5C9Z4 860 aaKnown RBP23.37■■□□□ 1.33
CLN6-213ENST00000636212 CDAN1Q8IWY9 1227 aa23.37■■□□□ 1.33
CLN6-213ENST00000636212 FAM151AQ8WW52 585 aa23.37■■□□□ 1.33
CLN6-213ENST00000636212 OPTNQ96CV9 577 aa23.37■■□□□ 1.33
CLN6-213ENST00000636212 CFHR5Q9BXR6 569 aa23.37■■□□□ 1.33
CLN6-213ENST00000636212 USP40Q9NVE5 1235 aa23.37■■□□□ 1.33
CLN6-213ENST00000636212 GPR25O00155 361 aa23.36■■□□□ 1.33
CLN6-213ENST00000636212 CDC42EP5Q6NZY7 148 aa23.36■■□□□ 1.33
CLN6-213ENST00000636212 UQCRFS1P1P0C7P4 283 aa23.35■■□□□ 1.33
CLN6-213ENST00000636212 POLA2Q14181 598 aa23.35■■□□□ 1.33
CLN6-213ENST00000636212 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.35■■□□□ 1.33
CLN6-213ENST00000636212 ERICH6Q7L0X2 663 aa23.35■■□□□ 1.33
CLN6-213ENST00000636212 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.35■■□□□ 1.33
CLN6-213ENST00000636212 ZNF296Q8WUU4 475 aaPredicted RBP23.35■■□□□ 1.33
CLN6-213ENST00000636212 ZBTB7BO15156 539 aaPredicted RBP23.34■■□□□ 1.33
CLN6-213ENST00000636212 SURF6O75683 361 aaKnown RBP23.34■■□□□ 1.33
CLN6-213ENST00000636212 TCP10Q12799 353 aa23.34■■□□□ 1.33
CLN6-213ENST00000636212 VGLL4Q14135 290 aa23.34■■□□□ 1.33
CLN6-213ENST00000636212 SSH3Q8TE77 659 aa23.34■■□□□ 1.33
CLN6-213ENST00000636212 WRNIP1Q96S55 665 aa23.34■■□□□ 1.33
CLN6-213ENST00000636212 ZNF341Q9BYN7 854 aa23.34■■□□□ 1.33
CLN6-213ENST00000636212 C1orf115Q9H7X2 142 aa23.34■■□□□ 1.33
CLN6-213ENST00000636212 FKTNO75072 461 aa23.33■■□□□ 1.33
CLN6-213ENST00000636212 RLBP1P12271 317 aa23.33■■□□□ 1.33
CLN6-213ENST00000636212 GTF2A2P52657 109 aa23.33■■□□□ 1.33
CLN6-213ENST00000636212 PKN2Q16513 984 aaKnown RBP23.33■■□□□ 1.33
CLN6-213ENST00000636212 SPATA5Q8NB90 893 aa23.33■■□□□ 1.33
CLN6-213ENST00000636212 GPR108Q9NPR9 543 aa23.33■■□□□ 1.33
CLN6-213ENST00000636212 OTOFQ9HC10 1997 aa23.32■■□□□ 1.32
CLN6-213ENST00000636212 GJA5P36382 358 aa23.32■■□□□ 1.32
CLN6-213ENST00000636212 GSTO1P78417 241 aa23.32■■□□□ 1.32
CLN6-213ENST00000636212 CCDC158Q5M9N0 1113 aa23.32■■□□□ 1.32
CLN6-213ENST00000636212 OTUD5Q96G74 571 aa23.32■■□□□ 1.32
CLN6-213ENST00000636212 IGF2BP3O00425 579 aaKnown RBP eCLIP23.31■■□□□ 1.32
CLN6-213ENST00000636212 WDHD1O75717 1129 aaPredicted RBP23.31■■□□□ 1.32
CLN6-213ENST00000636212 LDHCP07864 332 aa23.31■■□□□ 1.32
CLN6-213ENST00000636212 ARID4AP29374 1257 aaPredicted RBP23.31■■□□□ 1.32
CLN6-213ENST00000636212 TTC39AQ5SRH9 613 aa23.31■■□□□ 1.32
CLN6-213ENST00000636212 ERO1BQ86YB8 467 aa23.31■■□□□ 1.32
CLN6-213ENST00000636212 HMG20BQ9P0W2 317 aa23.31■■□□□ 1.32
CLN6-213ENST00000636212 GAKO14976 1311 aa23.31■■□□□ 1.32
CLN6-213ENST00000636212 LAMB1P07942 1786 aa23.3■■□□□ 1.32
CLN6-213ENST00000636212 TNNI3KQ59H18 835 aa23.3■■□□□ 1.32
CLN6-213ENST00000636212 MIGA2Q7L4E1 593 aa23.3■■□□□ 1.32
CLN6-213ENST00000636212 FAM163AQ96GL9 167 aaPredicted RBP23.3■■□□□ 1.32
CLN6-213ENST00000636212 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.3■■□□□ 1.32
CLN6-213ENST00000636212 FPGT-TNNI3KV9GXZ4 949 aa23.3■■□□□ 1.32
CLN6-213ENST00000636212 CCL15-CCL14A0A0B4J2E2 113 aa23.29■■□□□ 1.32
CLN6-213ENST00000636212 TESPA1A2RU30 521 aaPredicted RBP23.29■■□□□ 1.32
CLN6-213ENST00000636212 SPDYE5A6NIY4 337 aa23.29■■□□□ 1.32
CLN6-213ENST00000636212 ENTPD3O75355 529 aa23.29■■□□□ 1.32
CLN6-213ENST00000636212 BTDP43251 543 aa23.29■■□□□ 1.32
CLN6-213ENST00000636212 NFIAQ12857 509 aa23.29■■□□□ 1.32
CLN6-213ENST00000636212 CCL15Q16663 113 aa23.29■■□□□ 1.32
CLN6-213ENST00000636212 ZSCAN29Q8IWY8 852 aaPredicted RBP23.29■■□□□ 1.32
CLN6-213ENST00000636212 ZKSCAN4Q969J2 545 aaPredicted RBP23.29■■□□□ 1.32
CLN6-213ENST00000636212 RAI14Q9P0K7 980 aa23.29■■□□□ 1.32
CLN6-213ENST00000636212 MYH2Q9UKX2 1941 aa23.29■■□□□ 1.32
CLN6-213ENST00000636212 MROH7-TTC4A0A0A0MT08 1334 aa23.29■■□□□ 1.32
CLN6-213ENST00000636212 MECOMQ03112 1051 aa23.28■■□□□ 1.32
CLN6-213ENST00000636212 PANK1Q8TE04 598 aa23.28■■□□□ 1.32
CLN6-213ENST00000636212 NOL10Q9BSC4 688 aaKnown RBP23.28■■□□□ 1.32
CLN6-213ENST00000636212 IDI2Q9BXS1 227 aa23.28■■□□□ 1.32
CLN6-213ENST00000636212 LRP2BPQ9P2M1 347 aa23.28■■□□□ 1.32
CLN6-213ENST00000636212 FAM198AQ9UFP1 575 aa23.28■■□□□ 1.32
CLN6-213ENST00000636212 SNCAIPQ9Y6H5 919 aa23.28■■□□□ 1.32
CLN6-213ENST00000636212 AK9Q5TCS8 1911 aa23.27■■□□□ 1.32
CLN6-213ENST00000636212 CETPP11597 493 aa23.27■■□□□ 1.32
CLN6-213ENST00000636212 RGS3P49796 1198 aa23.27■■□□□ 1.32
CLN6-213ENST00000636212 CNKSR2Q8WXI2 1034 aa23.27■■□□□ 1.32
CLN6-213ENST00000636212 MS4A4AQ96JQ5 239 aa23.27■■□□□ 1.32
CLN6-213ENST00000636212 CHMP4BQ9H444 224 aaKnown RBP23.27■■□□□ 1.32
CLN6-213ENST00000636212 NOP58Q9Y2X3 529 aaKnown RBP23.27■■□□□ 1.32
CLN6-213ENST00000636212 MAP4K4O95819 1239 aaPredicted RBP23.26■■□□□ 1.31
CLN6-213ENST00000636212 SNAPC2Q13487 334 aa23.26■■□□□ 1.31
CLN6-213ENST00000636212 ERC1Q8IUD2 1116 aa23.26■■□□□ 1.31
CLN6-213ENST00000636212 R3HDMLQ9H3Y0 253 aa23.26■■□□□ 1.31
CLN6-213ENST00000636212 MCAMP43121 646 aa23.25■■□□□ 1.31
CLN6-213ENST00000636212 PPATQ06203 517 aa23.25■■□□□ 1.31
CLN6-213ENST00000636212 CRHR2Q13324 411 aa23.25■■□□□ 1.31
CLN6-213ENST00000636212 PPIL2Q13356 520 aa23.25■■□□□ 1.31
CLN6-213ENST00000636212 CEP85Q6P2H3 762 aa23.25■■□□□ 1.31
CLN6-213ENST00000636212 PI16Q6UXB8 463 aa23.25■■□□□ 1.31
CLN6-213ENST00000636212 TBC1D9Q6ZT07 1266 aa23.25■■□□□ 1.31
CLN6-213ENST00000636212 ERO1AQ96HE7 468 aa23.25■■□□□ 1.31
CLN6-213ENST00000636212 PTPN18Q99952 460 aa23.25■■□□□ 1.31
CLN6-213ENST00000636212 ZFYVE28Q9HCC9 887 aa23.25■■□□□ 1.31
CLN6-213ENST00000636212 GPR75-ASB3A0A0A6YYF3 556 aa23.24■■□□□ 1.31
CLN6-213ENST00000636212 INPP5BP32019 993 aa23.24■■□□□ 1.31
CLN6-213ENST00000636212 PICALMQ13492 652 aa23.24■■□□□ 1.31
CLN6-213ENST00000636212 TAF1CQ15572 869 aaPredicted RBP23.24■■□□□ 1.31
CLN6-213ENST00000636212 HSP90AB4PQ58FF6 505 aa23.24■■□□□ 1.31
CLN6-213ENST00000636212 BRI3BPQ8WY22 251 aa23.24■■□□□ 1.31
CLN6-213ENST00000636212 NSUN4Q96CB9 384 aaKnown RBP23.24■■□□□ 1.31
CLN6-213ENST00000636212 DBNDD2Q9BQY9 259 aa23.24■■□□□ 1.31
CLN6-213ENST00000636212 RCAN3Q9UKA8 241 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms