RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 RFC4P35249 363 aa8.41□□□□□ -1.06
BRCA1-230ENST00000634433 ZNF445P59923 1031 aa8.41□□□□□ -1.06
BRCA1-230ENST00000634433 HMGN5P82970 282 aaKnown RBP8.41□□□□□ -1.06
BRCA1-230ENST00000634433 ALX1Q15699 326 aa8.41□□□□□ -1.06
BRCA1-230ENST00000634433 CAVIN4Q5BKX8 364 aa8.41□□□□□ -1.06
BRCA1-230ENST00000634433 TRAPPC3LQ5T215 181 aa8.41□□□□□ -1.06
BRCA1-230ENST00000634433 PI16Q6UXB8 463 aa8.41□□□□□ -1.06
BRCA1-230ENST00000634433 STOX1Q6ZVD7 989 aa8.41□□□□□ -1.06
BRCA1-230ENST00000634433 RALYLQ86SE5 291 aaKnown RBP8.41□□□□□ -1.06
BRCA1-230ENST00000634433 NCOA7Q8NI08 942 aa8.41□□□□□ -1.06
BRCA1-230ENST00000634433 BRF1Q92994 677 aa8.41□□□□□ -1.06
BRCA1-230ENST00000634433 TCEANC2Q96MN5 208 aa8.41□□□□□ -1.06
BRCA1-230ENST00000634433 ANKRD2Q9GZV1 360 aa8.41□□□□□ -1.06
BRCA1-230ENST00000634433 ZNF532Q9HCE3 1301 aa8.41□□□□□ -1.06
BRCA1-230ENST00000634433 PHF14O94880 888 aa8.4□□□□□ -1.06
BRCA1-230ENST00000634433 TCF3P15923 654 aa8.4□□□□□ -1.06
BRCA1-230ENST00000634433 PDE6BP35913 854 aa8.4□□□□□ -1.06
BRCA1-230ENST00000634433 CAVIN1Q6NZI2 390 aaKnown RBP8.4□□□□□ -1.06
BRCA1-230ENST00000634433 BICDL1Q6ZP65 573 aa8.4□□□□□ -1.06
BRCA1-230ENST00000634433 BCL2L12Q9HB09 334 aa8.4□□□□□ -1.06
BRCA1-230ENST00000634433 ZNF219Q9P2Y4 722 aaPredicted RBP8.4□□□□□ -1.06
BRCA1-230ENST00000634433 DDX60Q8IY21 1712 aaKnown RBP8.4□□□□□ -1.06
BRCA1-230ENST00000634433 AKAP11Q9UKA4 1901 aa8.4□□□□□ -1.07
BRCA1-230ENST00000634433 ARAP2Q8WZ64 1704 aa8.4□□□□□ -1.07
BRCA1-230ENST00000634433 VPS37CA5D8V6 355 aaPredicted RBP8.4□□□□□ -1.07
BRCA1-230ENST00000634433 APPP05067 770 aa8.4□□□□□ -1.07
BRCA1-230ENST00000634433 ST3GAL1Q11201 340 aa8.4□□□□□ -1.07
BRCA1-230ENST00000634433 STK3Q13188 491 aa8.4□□□□□ -1.07
BRCA1-230ENST00000634433 RASGRF1Q13972 1273 aa8.4□□□□□ -1.07
BRCA1-230ENST00000634433 USP48Q86UV5 1035 aa8.4□□□□□ -1.07
BRCA1-230ENST00000634433 FAM184AQ8NB25 1140 aa8.4□□□□□ -1.07
BRCA1-230ENST00000634433 ARHGEF1Q92888 912 aaKnown RBP8.4□□□□□ -1.07
BRCA1-230ENST00000634433 GRPEL1Q9HAV7 217 aa8.4□□□□□ -1.07
BRCA1-230ENST00000634433 ZMYM6O95789 1325 aa8.4□□□□□ -1.07
BRCA1-230ENST00000634433 BTAF1O14981 1849 aa8.4□□□□□ -1.07
BRCA1-230ENST00000634433 TCRBV5S4A2TA0A5A2 114 aa8.39□□□□□ -1.07
BRCA1-230ENST00000634433 RBM47A0AV96 593 aaKnown RBP8.39□□□□□ -1.07
BRCA1-230ENST00000634433 NPHP1O15259 732 aa8.39□□□□□ -1.07
BRCA1-230ENST00000634433 DHX16O60231 1041 aaKnown RBP8.39□□□□□ -1.07
BRCA1-230ENST00000634433 LETM1O95202 739 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-230ENST00000634433 BCAMP50895 628 aa8.39□□□□□ -1.07
BRCA1-230ENST00000634433 KCNQ4P56696 695 aa8.39□□□□□ -1.07
BRCA1-230ENST00000634433 RPS8P62241 208 aaKnown RBP8.39□□□□□ -1.07
BRCA1-230ENST00000634433 VPS37DQ86XT2 251 aa8.39□□□□□ -1.07
BRCA1-230ENST00000634433 GPT2Q8TD30 523 aa8.39□□□□□ -1.07
BRCA1-230ENST00000634433 STRBPQ96SI9 672 aaKnown RBP8.39□□□□□ -1.07
BRCA1-230ENST00000634433 NACAP1Q9BZK3 213 aa8.39□□□□□ -1.07
BRCA1-230ENST00000634433 STK32BQ9NY57 414 aa8.39□□□□□ -1.07
BRCA1-230ENST00000634433 DENND2AQ9ULE3 1009 aa8.39□□□□□ -1.07
BRCA1-230ENST00000634433 MINPP1Q9UNW1 487 aa8.39□□□□□ -1.07
BRCA1-230ENST00000634433 MYH7P12883 1935 aa8.39□□□□□ -1.07
BRCA1-230ENST00000634433 XRCC6P12956 609 aaKnown RBP eCLIP8.39□□□□□ -1.07
BRCA1-230ENST00000634433 EVCP57679 992 aa8.39□□□□□ -1.07
BRCA1-230ENST00000634433 UBE2HP62256 183 aa8.39□□□□□ -1.07
BRCA1-230ENST00000634433 ZSCAN23Q3MJ62 389 aa8.39□□□□□ -1.07
BRCA1-230ENST00000634433 SLC27A3Q5K4L6 730 aa8.39□□□□□ -1.07
BRCA1-230ENST00000634433 TTLL5Q6EMB2 1281 aa8.39□□□□□ -1.07
BRCA1-230ENST00000634433 PTF1AQ7RTS3 328 aa8.39□□□□□ -1.07
BRCA1-230ENST00000634433 MAGEB6Q8N7X4 407 aa8.39□□□□□ -1.07
BRCA1-230ENST00000634433 ANP32BQ92688 251 aaKnown RBP8.39□□□□□ -1.07
BRCA1-230ENST00000634433 MTFR1LQ9H019 292 aa8.39□□□□□ -1.07
BRCA1-230ENST00000634433 ZSCAN16Q9H4T2 348 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-230ENST00000634433 LRP2BPQ9P2M1 347 aa8.39□□□□□ -1.07
BRCA1-230ENST00000634433 SRP68Q9UHB9 627 aaKnown RBP8.39□□□□□ -1.07
BRCA1-230ENST00000634433 SCN7AQ01118 1682 aa8.39□□□□□ -1.07
BRCA1-230ENST00000634433 H3BQV1 296 aa8.38□□□□□ -1.07
BRCA1-230ENST00000634433 PTGER2P43116 358 aa8.38□□□□□ -1.07
BRCA1-230ENST00000634433 KRT85P78386 507 aa8.38□□□□□ -1.07
BRCA1-230ENST00000634433 APOBRQ0VD83 1088 aa8.38□□□□□ -1.07
BRCA1-230ENST00000634433 SMARCC2Q8TAQ2 1214 aa8.38□□□□□ -1.07
BRCA1-230ENST00000634433 IPO4Q8TEX9 1081 aaKnown RBP8.38□□□□□ -1.07
BRCA1-230ENST00000634433 WWC3Q9ULE0 1092 aa8.38□□□□□ -1.07
BRCA1-230ENST00000634433 ZNF804BA4D1E1 1349 aa8.38□□□□□ -1.07
BRCA1-230ENST00000634433 PRC1O43663 620 aa8.38□□□□□ -1.07
BRCA1-230ENST00000634433 MLLT3P42568 568 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-230ENST00000634433 SCRN1Q12765 414 aa8.38□□□□□ -1.07
BRCA1-230ENST00000634433 MB21D2Q8IYB1 491 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-230ENST00000634433 RBM46Q8TBY0 533 aaKnown RBP8.38□□□□□ -1.07
BRCA1-230ENST00000634433 LRRC2Q9BYS8 371 aa8.38□□□□□ -1.07
BRCA1-230ENST00000634433 CNNM2Q9H8M5 875 aa8.38□□□□□ -1.07
BRCA1-230ENST00000634433 FOXP2O15409 715 aa8.37□□□□□ -1.07
BRCA1-230ENST00000634433 PDIA3P30101 505 aaKnown RBP8.37□□□□□ -1.07
BRCA1-230ENST00000634433 HAND2P61296 217 aa8.37□□□□□ -1.07
BRCA1-230ENST00000634433 COL9A3Q14050 684 aaPredicted RBP8.37□□□□□ -1.07
BRCA1-230ENST00000634433 FAM182BQ5T319 152 aa8.37□□□□□ -1.07
BRCA1-230ENST00000634433 PMM1Q92871 262 aa8.37□□□□□ -1.07
BRCA1-230ENST00000634433 SCAND2PQ9GZW5 306 aaPredicted RBP8.37□□□□□ -1.07
BRCA1-230ENST00000634433 NAPBQ9H115 298 aa8.37□□□□□ -1.07
BRCA1-230ENST00000634433 CNPY2Q9Y2B0 182 aa8.37□□□□□ -1.07
BRCA1-230ENST00000634433 PDS5AQ29RF7 1337 aaKnown RBP8.37□□□□□ -1.07
BRCA1-230ENST00000634433 PNPLA7Q6ZV29 1317 aa8.37□□□□□ -1.07
BRCA1-230ENST00000634433 CARMIL3Q8ND23 1372 aa8.37□□□□□ -1.07
BRCA1-230ENST00000634433 EP400Q96L91 3159 aa8.37□□□□□ -1.07
BRCA1-230ENST00000634433 SNAP23O00161 211 aa8.37□□□□□ -1.07
BRCA1-230ENST00000634433 MBD4O95243 580 aa8.37□□□□□ -1.07
BRCA1-230ENST00000634433 FAM193AP78312 1265 aa8.37□□□□□ -1.07
BRCA1-230ENST00000634433 TAGLNQ01995 201 aaKnown RBP8.37□□□□□ -1.07
BRCA1-230ENST00000634433 NAA16Q6N069 864 aaPredicted RBP8.37□□□□□ -1.07
BRCA1-230ENST00000634433 LRSAM1Q6UWE0 723 aa8.37□□□□□ -1.07
BRCA1-230ENST00000634433 C3orf67Q6ZVT6 689 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 784.2 ms