RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 SENP3-EIF4A1A0A087X0R7 540 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 DIAPH1O60610 1272 aaKnown RBP4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 CSPG5O95196 566 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 CAVIN2O95810 425 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 SLFN14P0C7P3 912 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 DDIT3P35638 169 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 CLK1P49759 484 aaKnown RBP4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 HSP90AA5PQ58FG0 334 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 TRIM68Q6AZZ1 485 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 CCSAPQ6IQ19 270 aaPredicted RBP4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 SHQ1Q6PI26 577 aaKnown RBP4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 WDR66Q8TBY9 1149 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 DDX11Q96FC9 970 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 CLMNQ96JQ2 1002 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 GPR101Q96P66 508 aaPredicted RBP4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 YIPF2Q9BWQ6 316 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 VCX3BQ9H321 246 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 ZNF304Q9HCX3 659 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 ZMAT5Q9UDW3 170 aaKnown RBP4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 ASAP1Q9ULH1 1129 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 FGD6Q6ZV73 1430 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 KDM1AO60341 852 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 FMNL1O95466 1100 aaPredicted RBP4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 U2AF2P26368 475 aaKnown RBP eCLIP4.42□□□□□ -1.76e-7■■□□□ 13.2
R3HDM1-220ENST00000628915 SMARCA1P28370 1054 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 HNRNPH2P55795 449 aaKnown RBP4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 TAF11Q15544 211 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 ZSCAN23Q3MJ62 389 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 CCDC93Q567U6 631 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 MAATS1Q7Z4T9 603 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 FERMT3Q86UX7 667 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 PARP9Q8IXQ6 854 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 TEX11Q8IYF3 940 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 SLC43A3Q8NBI5 491 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 NEK9Q8TD19 979 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 TSR2Q969E8 191 aaKnown RBP4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 RUNDC1Q96C34 613 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 KIAA1468Q9P260 1216 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 SATB2Q9UPW6 733 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 BLMP54132 1417 aaPredicted RBP4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 PRAG1Q86YV5 1406 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 SHANK2Q9UPX8 1470 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 GOLGA6L9A6NEM1 432 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 STK25O00506 426 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 RNASEH2AO75792 299 aaKnown RBP4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 RPS6KA3P51812 740 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 CLNS1AP54105 237 aaKnown RBP4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 GEMIN4P57678 1058 aaKnown RBP4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 AMPD3Q01432 767 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 GNPTABQ3T906 1256 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 MMS22LQ6ZRQ5 1243 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 DHRS1Q96LJ7 313 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 MAP3K14Q99558 947 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 NSRP1Q9H0G5 558 aaKnown RBP4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 PRKAG2Q9UGJ0 569 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 LUC7L2Q9Y383 392 aaKnown RBP4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 MORC2Q9Y6X9 1032 aaPredicted RBP4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 ASXL2Q76L83 1435 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 USP47Q96K76 1375 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 STRCP1A6NGW2 1772 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 KIDINS220Q9ULH0 1771 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 GTPBP6O43824 516 aaPredicted RBP4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 PPP1R12BO60237 982 aaPredicted RBP4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 PLCG2P16885 1265 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 ZFXP17010 805 aaPredicted RBP4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 PSMD7P51665 324 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 SKOR1P84550 965 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 ADCY1Q08828 1119 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 FKBP5Q13451 457 aaPredicted RBP4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 NEDD9Q14511 834 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 PSMD6Q15008 389 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 ANKRD13DQ6ZTN6 518 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 RBM12BQ8IXT5 1001 aaKnown RBP4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 FAM9CQ8IZT9 166 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 TSC1Q92574 1164 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 HPS3Q969F9 1004 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 PCMTD1Q96MG8 357 aaPredicted RBP4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 KMT5AQ9NQR1 393 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 HELLSQ9NRZ9 838 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 FBXO2Q9UK22 296 aaPredicted RBP4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 PCDHB8Q9UN66 801 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 PCDHGA4Q9Y5G9 962 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 TDRD9Q8NDG6 1382 aaKnown RBP4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 ARHGAP31Q2M1Z3 1444 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 TLDC2A0PJX2 215 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 ERC2O15083 957 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 MTRF1O75570 445 aaKnown RBP4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 MBD3O95983 291 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 POU5F1BQ06416 359 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 NAA25Q14CX7 972 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 C11orf91Q3C1V1 193 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 PLEKHG6Q3KR16 790 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 KAZNQ674X7 775 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 CAVIN1Q6NZI2 390 aaKnown RBP4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 LRSAM1Q6UWE0 723 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 TEX19Q8NA77 164 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 GOLGA1Q92805 767 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms