RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 DIXDC1Q155Q3 683 aa27.45■■□□□ 1.98
SF1-220ENST00000626028 ZIC5Q96T25 663 aa27.45■■□□□ 1.98
SF1-220ENST00000626028 MAST2Q6P0Q8 1798 aa27.45■■□□□ 1.98
SF1-220ENST00000626028 LBX1P52954 281 aa27.44■■□□□ 1.98
SF1-220ENST00000626028 ERICH6Q7L0X2 663 aa27.44■■□□□ 1.98
SF1-220ENST00000626028 TMEM39BQ9GZU3 492 aa27.44■■□□□ 1.98
SF1-220ENST00000626028 MYO5AQ9Y4I1 1855 aaKnown RBP27.43■■□□□ 1.98
SF1-220ENST00000626028 USP2O75604 605 aaPredicted RBP27.43■■□□□ 1.98
SF1-220ENST00000626028 PRKG1Q13976 671 aa27.43■■□□□ 1.98
SF1-220ENST00000626028 CDC42EP5Q6NZY7 148 aa27.43■■□□□ 1.98
SF1-220ENST00000626028 ANKRD13AQ8IZ07 590 aa27.43■■□□□ 1.98
SF1-220ENST00000626028 CSRNP1Q96S65 589 aa27.43■■□□□ 1.98
SF1-220ENST00000626028 MAP4K4O95819 1239 aaPredicted RBP27.42■■□□□ 1.98
SF1-220ENST00000626028 ZBTB48P10074 688 aaPredicted RBP27.42■■□□□ 1.98
SF1-220ENST00000626028 MCAMP43121 646 aa27.42■■□□□ 1.98
SF1-220ENST00000626028 GSTO1P78417 241 aa27.42■■□□□ 1.98
SF1-220ENST00000626028 TTC39AQ5SRH9 613 aa27.42■■□□□ 1.98
SF1-220ENST00000626028 FAM151AQ8WW52 585 aa27.42■■□□□ 1.98
SF1-220ENST00000626028 SLC10A4Q96EP9 437 aa27.42■■□□□ 1.98
SF1-220ENST00000626028 DBNDD2Q9BQY9 259 aa27.42■■□□□ 1.98
SF1-220ENST00000626028 CASP8AP2Q9UKL3 1982 aa27.41■■□□□ 1.98
SF1-220ENST00000626028 LDHCP07864 332 aa27.41■■□□□ 1.98
SF1-220ENST00000626028 EXOC6BQ9Y2D4 811 aa27.41■■□□□ 1.98
SF1-220ENST00000626028 DOCK2Q92608 1830 aa27.41■■□□□ 1.98
SF1-220ENST00000626028 TM4SF4P48230 202 aa27.4■■□□□ 1.98
SF1-220ENST00000626028 CACNB3P54284 484 aa27.4■■□□□ 1.98
SF1-220ENST00000626028 INHBEP58166 350 aa27.4■■□□□ 1.98
SF1-220ENST00000626028 SREBF2Q12772 1141 aa27.4■■□□□ 1.98
SF1-220ENST00000626028 SPRYD7Q5W111 196 aa27.4■■□□□ 1.98
SF1-220ENST00000626028 EAF2Q96CJ1 260 aaPredicted RBP27.4■■□□□ 1.98
SF1-220ENST00000626028 DBNLQ9UJU6 430 aaKnown RBP27.4■■□□□ 1.98
SF1-220ENST00000626028 RAB11FIP3O75154 756 aa27.39■■□□□ 1.98
SF1-220ENST00000626028 MECOMQ03112 1051 aa27.39■■□□□ 1.98
SF1-220ENST00000626028 C20orf194Q5TEA3 1177 aa27.39■■□□□ 1.98
SF1-220ENST00000626028 IFFO2Q5TF58 517 aa27.39■■□□□ 1.98
SF1-220ENST00000626028 DCAF15Q66K64 600 aa27.39■■□□□ 1.98
SF1-220ENST00000626028 SIRT2Q8IXJ6 389 aa27.39■■□□□ 1.98
SF1-220ENST00000626028 KIF1BPQ96EK5 621 aa27.39■■□□□ 1.98
SF1-220ENST00000626028 IDI2Q9BXS1 227 aa27.39■■□□□ 1.98
SF1-220ENST00000626028 USP40Q9NVE5 1235 aa27.39■■□□□ 1.98
SF1-220ENST00000626028 MROH7-TTC4A0A0A0MT08 1334 aa27.39■■□□□ 1.97
SF1-220ENST00000626028 RHPN1Q8TCX5 695 aa27.38■■□□□ 1.97
SF1-220ENST00000626028 NSUN4Q96CB9 384 aaKnown RBP27.38■■□□□ 1.97
SF1-220ENST00000626028 GPR75-ASB3A0A0A6YYF3 556 aa27.37■■□□□ 1.97
SF1-220ENST00000626028 TMED8Q6PL24 325 aaPredicted RBP27.37■■□□□ 1.97
SF1-220ENST00000626028 PI16Q6UXB8 463 aa27.37■■□□□ 1.97
SF1-220ENST00000626028 TNS4Q8IZW8 715 aa27.37■■□□□ 1.97
SF1-220ENST00000626028 RNF186Q9NXI6 227 aa27.37■■□□□ 1.97
SF1-220ENST00000626028 LRP2BPQ9P2M1 347 aa27.37■■□□□ 1.97
SF1-220ENST00000626028 MANSC4A6NHS7 340 aaPredicted RBP27.36■■□□□ 1.97
SF1-220ENST00000626028 ENTPD3O75355 529 aa27.36■■□□□ 1.97
SF1-220ENST00000626028 NPM3O75607 178 aaKnown RBP27.36■■□□□ 1.97
SF1-220ENST00000626028 CLASRPQ8N2M8 674 aaKnown RBP27.36■■□□□ 1.97
SF1-220ENST00000626028 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.36■■□□□ 1.97
SF1-220ENST00000626028 FZD1Q9UP38 647 aa27.36■■□□□ 1.97
SF1-220ENST00000626028 RFX7Q2KHR2 1363 aa27.35■■□□□ 1.97
SF1-220ENST00000626028 FOCADQ5VW36 1801 aa27.35■■□□□ 1.97
SF1-220ENST00000626028 MAP3K9P80192 1104 aa27.35■■□□□ 1.97
SF1-220ENST00000626028 CDAN1Q8IWY9 1227 aa27.35■■□□□ 1.97
SF1-220ENST00000626028 WNK4Q96J92 1243 aa27.35■■□□□ 1.97
SF1-220ENST00000626028 CCDC8Q9H0W5 538 aaPredicted RBP27.35■■□□□ 1.97
SF1-220ENST00000626028 CDK5RAP2Q96SN8 1893 aa27.34■■□□□ 1.97
SF1-220ENST00000626028 BTDP43251 543 aa27.34■■□□□ 1.97
SF1-220ENST00000626028 TBC1D9Q6ZT07 1266 aa27.34■■□□□ 1.97
SF1-220ENST00000626028 AACSQ86V21 672 aa27.34■■□□□ 1.97
SF1-220ENST00000626028 ZNF384Q8TF68 577 aa27.34■■□□□ 1.97
SF1-220ENST00000626028 CLMNQ96JQ2 1002 aa27.34■■□□□ 1.97
SF1-220ENST00000626028 RAI14Q9P0K7 980 aa27.34■■□□□ 1.97
SF1-220ENST00000626028 FAM198AQ9UFP1 575 aa27.34■■□□□ 1.97
SF1-220ENST00000626028 CSADQ9Y600 493 aa27.34■■□□□ 1.97
SF1-220ENST00000626028 NFIAQ12857 509 aa27.33■■□□□ 1.97
SF1-220ENST00000626028 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.33■■□□□ 1.97
SF1-220ENST00000626028 TRPA1O75762 1119 aa27.32■■□□□ 1.96
SF1-220ENST00000626028 ALDH1A1P00352 501 aa27.32■■□□□ 1.96
SF1-220ENST00000626028 CYP2E1P05181 493 aaPredicted RBP27.32■■□□□ 1.96
SF1-220ENST00000626028 CFHR5Q9BXR6 569 aa27.32■■□□□ 1.96
SF1-220ENST00000626028 ZNF341Q9BYN7 854 aa27.32■■□□□ 1.96
SF1-220ENST00000626028 TLR7Q9NYK1 1049 aaKnown RBP27.32■■□□□ 1.96
SF1-220ENST00000626028 TCP10Q12799 353 aa27.31■■□□□ 1.96
SF1-220ENST00000626028 NOM1Q5C9Z4 860 aaKnown RBP27.31■■□□□ 1.96
SF1-220ENST00000626028 NOL10Q9BSC4 688 aaKnown RBP27.31■■□□□ 1.96
SF1-220ENST00000626028 COL2A1P02458 1487 aaPredicted RBP27.31■■□□□ 1.96
SF1-220ENST00000626028 WDHD1O75717 1129 aaPredicted RBP27.3■■□□□ 1.96
SF1-220ENST00000626028 RGS3P49796 1198 aa27.3■■□□□ 1.96
SF1-220ENST00000626028 VGLL4Q14135 290 aa27.3■■□□□ 1.96
SF1-220ENST00000626028 SNRKQ9NRH2 765 aa27.3■■□□□ 1.96
SF1-220ENST00000626028 TSKSQ9UJT2 592 aa27.3■■□□□ 1.96
SF1-220ENST00000626028 BAG3O95817 575 aa27.29■■□□□ 1.96
SF1-220ENST00000626028 PLCG2P16885 1265 aa27.29■■□□□ 1.96
SF1-220ENST00000626028 ZAP70P43403 619 aa27.29■■□□□ 1.96
SF1-220ENST00000626028 RRP1P56182 461 aaKnown RBP27.29■■□□□ 1.96
SF1-220ENST00000626028 RHBDL3P58872 404 aa27.29■■□□□ 1.96
SF1-220ENST00000626028 NAA16Q6N069 864 aaPredicted RBP27.29■■□□□ 1.96
SF1-220ENST00000626028 CERS3Q8IU89 383 aa27.29■■□□□ 1.96
SF1-220ENST00000626028 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.29■■□□□ 1.96
SF1-220ENST00000626028 WRNIP1Q96S55 665 aa27.29■■□□□ 1.96
SF1-220ENST00000626028 IL1RAPL2Q9NP60 686 aa27.29■■□□□ 1.96
SF1-220ENST00000626028 IFIT2P09913 472 aaKnown RBP27.28■■□□□ 1.96
SF1-220ENST00000626028 OPTNQ96CV9 577 aa27.28■■□□□ 1.96
SF1-220ENST00000626028 ZNF112Q9UJU3 913 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms