RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 CDC42EP5Q6NZY7 148 aa13.37□□□□□ -0.27
SSBP4-215ENST00000625926 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.37□□□□□ -0.27
SSBP4-215ENST00000625926 IFNL1Q8IU54 200 aa13.37□□□□□ -0.27
SSBP4-215ENST00000625926 SLF2Q8IX21 1173 aa13.37□□□□□ -0.27
SSBP4-215ENST00000625926 FAM151AQ8WW52 585 aa13.37□□□□□ -0.27
SSBP4-215ENST00000625926 CFHR5Q9BXR6 569 aa13.37□□□□□ -0.27
SSBP4-215ENST00000625926 C1orf115Q9H7X2 142 aa13.37□□□□□ -0.27
SSBP4-215ENST00000625926 USP40Q9NVE5 1235 aa13.37□□□□□ -0.27
SSBP4-215ENST00000625926 ABCF2Q9UG63 623 aa13.37□□□□□ -0.27
SSBP4-215ENST00000625926 A0A1B0GUL6 1792 aa13.37□□□□□ -0.27
SSBP4-215ENST00000625926 SURF6O75683 361 aaKnown RBP13.36□□□□□ -0.27
SSBP4-215ENST00000625926 NOM1Q5C9Z4 860 aaKnown RBP13.36□□□□□ -0.27
SSBP4-215ENST00000625926 DCAF15Q66K64 600 aa13.36□□□□□ -0.27
SSBP4-215ENST00000625926 OTUD7BQ6GQQ9 843 aa13.36□□□□□ -0.27
SSBP4-215ENST00000625926 DZIP1Q86YF9 867 aaKnown RBP13.36□□□□□ -0.27
SSBP4-215ENST00000625926 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.36□□□□□ -0.27
SSBP4-215ENST00000625926 OPTNQ96CV9 577 aa13.36□□□□□ -0.27
SSBP4-215ENST00000625926 GPR108Q9NPR9 543 aa13.36□□□□□ -0.27
SSBP4-215ENST00000625926 CSADQ9Y600 493 aa13.36□□□□□ -0.27
SSBP4-215ENST00000625926 GPR25O00155 361 aa13.35□□□□□ -0.27
SSBP4-215ENST00000625926 GJA5P36382 358 aa13.35□□□□□ -0.27
SSBP4-215ENST00000625926 TCP10Q12799 353 aa13.35□□□□□ -0.27
SSBP4-215ENST00000625926 VGLL4Q14135 290 aa13.35□□□□□ -0.27
SSBP4-215ENST00000625926 ERICH6Q7L0X2 663 aa13.35□□□□□ -0.27
SSBP4-215ENST00000625926 CTU1Q7Z7A3 348 aaKnown RBP13.35□□□□□ -0.27
SSBP4-215ENST00000625926 SPATA5Q8NB90 893 aa13.35□□□□□ -0.27
SSBP4-215ENST00000625926 PANK1Q8TE04 598 aa13.35□□□□□ -0.27
SSBP4-215ENST00000625926 ZNF296Q8WUU4 475 aaPredicted RBP13.35□□□□□ -0.27
SSBP4-215ENST00000625926 FAM163AQ96GL9 167 aaPredicted RBP13.35□□□□□ -0.27
SSBP4-215ENST00000625926 HMG20BQ9P0W2 317 aa13.35□□□□□ -0.27
SSBP4-215ENST00000625926 NOP58Q9Y2X3 529 aaKnown RBP13.35□□□□□ -0.27
SSBP4-215ENST00000625926 TESPA1A2RU30 521 aaPredicted RBP13.34□□□□□ -0.27
SSBP4-215ENST00000625926 UQCRFS1P1P0C7P4 283 aa13.34□□□□□ -0.27
SSBP4-215ENST00000625926 ARID4AP29374 1257 aaPredicted RBP13.34□□□□□ -0.27
SSBP4-215ENST00000625926 NFIAQ12857 509 aa13.34□□□□□ -0.27
SSBP4-215ENST00000625926 TNNI3KQ59H18 835 aa13.34□□□□□ -0.27
SSBP4-215ENST00000625926 CCDC158Q5M9N0 1113 aa13.34□□□□□ -0.27
SSBP4-215ENST00000625926 MIGA2Q7L4E1 593 aa13.34□□□□□ -0.27
SSBP4-215ENST00000625926 WRNIP1Q96S55 665 aa13.34□□□□□ -0.27
SSBP4-215ENST00000625926 ZNF341Q9BYN7 854 aa13.34□□□□□ -0.27
SSBP4-215ENST00000625926 FPGT-TNNI3KV9GXZ4 949 aa13.34□□□□□ -0.27
SSBP4-215ENST00000625926 GAKO14976 1311 aa13.34□□□□□ -0.27
SSBP4-215ENST00000625926 RPAP1Q9BWH6 1393 aaPredicted RBP13.33□□□□□ -0.27
SSBP4-215ENST00000625926 POLR2AP24928 1970 aaKnown RBP13.33□□□□□ -0.28
SSBP4-215ENST00000625926 IGF2BP3O00425 579 aaKnown RBP eCLIP13.33□□□□□ -0.28
SSBP4-215ENST00000625926 FKTNO75072 461 aa13.33□□□□□ -0.28
SSBP4-215ENST00000625926 GTF2A2P52657 109 aa13.33□□□□□ -0.28
SSBP4-215ENST00000625926 MECOMQ03112 1051 aa13.33□□□□□ -0.28
SSBP4-215ENST00000625926 MS4A4AQ96JQ5 239 aa13.33□□□□□ -0.28
SSBP4-215ENST00000625926 IDI2Q9BXS1 227 aa13.33□□□□□ -0.28
SSBP4-215ENST00000625926 R3HDMLQ9H3Y0 253 aa13.33□□□□□ -0.28
SSBP4-215ENST00000625926 FAM198AQ9UFP1 575 aa13.33□□□□□ -0.28
SSBP4-215ENST00000625926 SPDYE5A6NIY4 337 aa13.32□□□□□ -0.28
SSBP4-215ENST00000625926 ENTPD3O75355 529 aa13.32□□□□□ -0.28
SSBP4-215ENST00000625926 LDHCP07864 332 aa13.32□□□□□ -0.28
SSBP4-215ENST00000625926 MCAMP43121 646 aa13.32□□□□□ -0.28
SSBP4-215ENST00000625926 BTDP43251 543 aa13.32□□□□□ -0.28
SSBP4-215ENST00000625926 GSTO1P78417 241 aa13.32□□□□□ -0.28
SSBP4-215ENST00000625926 PKN2Q16513 984 aaKnown RBP13.32□□□□□ -0.28
SSBP4-215ENST00000625926 TTC39AQ5SRH9 613 aa13.32□□□□□ -0.28
SSBP4-215ENST00000625926 CEP85Q6P2H3 762 aa13.32□□□□□ -0.28
SSBP4-215ENST00000625926 PI16Q6UXB8 463 aa13.32□□□□□ -0.28
SSBP4-215ENST00000625926 TBC1D9Q6ZT07 1266 aa13.32□□□□□ -0.28
SSBP4-215ENST00000625926 ERO1BQ86YB8 467 aa13.32□□□□□ -0.28
SSBP4-215ENST00000625926 ZFPM1Q8IX07 1006 aa13.32□□□□□ -0.28
SSBP4-215ENST00000625926 CNKSR2Q8WXI2 1034 aa13.32□□□□□ -0.28
SSBP4-215ENST00000625926 ZKSCAN4Q969J2 545 aaPredicted RBP13.32□□□□□ -0.28
SSBP4-215ENST00000625926 OTUD5Q96G74 571 aa13.32□□□□□ -0.28
SSBP4-215ENST00000625926 PTPN18Q99952 460 aa13.32□□□□□ -0.28
SSBP4-215ENST00000625926 RAI14Q9P0K7 980 aa13.32□□□□□ -0.28
SSBP4-215ENST00000625926 SNCAIPQ9Y6H5 919 aa13.32□□□□□ -0.28
SSBP4-215ENST00000625926 GPR75-ASB3A0A0A6YYF3 556 aa13.31□□□□□ -0.28
SSBP4-215ENST00000625926 CCL15-CCL14A0A0B4J2E2 113 aa13.31□□□□□ -0.28
SSBP4-215ENST00000625926 RGS3P49796 1198 aa13.31□□□□□ -0.28
SSBP4-215ENST00000625926 CCL15Q16663 113 aa13.31□□□□□ -0.28
SSBP4-215ENST00000625926 NSUN4Q96CB9 384 aaKnown RBP13.31□□□□□ -0.28
SSBP4-215ENST00000625926 DBNDD2Q9BQY9 259 aa13.31□□□□□ -0.28
SSBP4-215ENST00000625926 LRP2BPQ9P2M1 347 aa13.31□□□□□ -0.28
SSBP4-215ENST00000625926 ZNF112Q9UJU3 913 aa13.31□□□□□ -0.28
SSBP4-215ENST00000625926 RCAN3Q9UKA8 241 aa13.31□□□□□ -0.28
SSBP4-215ENST00000625926 MROH7-TTC4A0A0A0MT08 1334 aa13.31□□□□□ -0.28
SSBP4-215ENST00000625926 MAP4K4O95819 1239 aaPredicted RBP13.3□□□□□ -0.28
SSBP4-215ENST00000625926 INPP5BP32019 993 aa13.3□□□□□ -0.28
SSBP4-215ENST00000625926 PPATQ06203 517 aa13.3□□□□□ -0.28
SSBP4-215ENST00000625926 ERC1Q8IUD2 1116 aa13.3□□□□□ -0.28
SSBP4-215ENST00000625926 BRI3BPQ8WY22 251 aa13.3□□□□□ -0.28
SSBP4-215ENST00000625926 ZNF512BQ96KM6 892 aaPredicted RBP13.3□□□□□ -0.28
SSBP4-215ENST00000625926 CHMP4BQ9H444 224 aaKnown RBP13.3□□□□□ -0.28
SSBP4-215ENST00000625926 DDX19BQ9UMR2 479 aa13.3□□□□□ -0.28
SSBP4-215ENST00000625926 IRF6O14896 467 aa13.29□□□□□ -0.28
SSBP4-215ENST00000625926 WDHD1O75717 1129 aaPredicted RBP13.29□□□□□ -0.28
SSBP4-215ENST00000625926 CETPP11597 493 aa13.29□□□□□ -0.28
SSBP4-215ENST00000625926 CRHR2Q13324 411 aa13.29□□□□□ -0.28
SSBP4-215ENST00000625926 PPIL2Q13356 520 aa13.29□□□□□ -0.28
SSBP4-215ENST00000625926 SNAPC2Q13487 334 aa13.29□□□□□ -0.28
SSBP4-215ENST00000625926 PICALMQ13492 652 aa13.29□□□□□ -0.28
SSBP4-215ENST00000625926 HSP90AB4PQ58FF6 505 aa13.29□□□□□ -0.28
SSBP4-215ENST00000625926 ZSCAN29Q8IWY8 852 aaPredicted RBP13.29□□□□□ -0.28
SSBP4-215ENST00000625926 RPAP2Q8IXW5 612 aaPredicted RBP13.29□□□□□ -0.28
SSBP4-215ENST00000625926 ZNF384Q8TF68 577 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms