RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 DIXDC1Q155Q3 683 aa16.93■□□□□ 0.3
CLTCL1-212ENST00000622493 JAKMIP1Q96N16 626 aaKnown RBP16.93■□□□□ 0.3
CLTCL1-212ENST00000622493 SCN9AQ15858 1988 aa16.92■□□□□ 0.3
CLTCL1-212ENST00000622493 MYO3BQ8WXR4 1341 aa16.92■□□□□ 0.3
CLTCL1-212ENST00000622493 HMGB1P09429 215 aaKnown RBP16.92■□□□□ 0.3
CLTCL1-212ENST00000622493 DYNLL1P63167 89 aaKnown RBP16.92■□□□□ 0.3
CLTCL1-212ENST00000622493 ADCK5Q3MIX3 580 aa16.92■□□□□ 0.3
CLTCL1-212ENST00000622493 NIM1KQ8IY84 436 aa16.92■□□□□ 0.3
CLTCL1-212ENST00000622493 KCNQ5Q9NR82 932 aa16.92■□□□□ 0.3
CLTCL1-212ENST00000622493 ATP8A2Q9NTI2 1148 aa16.92■□□□□ 0.3
CLTCL1-212ENST00000622493 ZNRF3Q9ULT6 936 aa16.92■□□□□ 0.3
CLTCL1-212ENST00000622493 TTF2Q9UNY4 1162 aaKnown RBP16.92■□□□□ 0.3
CLTCL1-212ENST00000622493 CYP46A1Q9Y6A2 500 aa16.92■□□□□ 0.3
CLTCL1-212ENST00000622493 PSME4Q14997 1843 aa16.92■□□□□ 0.3
CLTCL1-212ENST00000622493 ZNF646O15015 1829 aaPredicted RBP16.91■□□□□ 0.3
CLTCL1-212ENST00000622493 YDJCA8MPS7 323 aa16.91■□□□□ 0.3
CLTCL1-212ENST00000622493 NFKBIEO00221 500 aa16.91■□□□□ 0.3
CLTCL1-212ENST00000622493 CASTP20810 708 aaKnown RBP16.91■□□□□ 0.3
CLTCL1-212ENST00000622493 HDLBPQ00341 1268 aaKnown RBP16.91■□□□□ 0.3
CLTCL1-212ENST00000622493 HHIPL2Q6UWX4 724 aa16.91■□□□□ 0.3
CLTCL1-212ENST00000622493 RUFY3Q7L099 469 aa16.91■□□□□ 0.3
CLTCL1-212ENST00000622493 JDP2Q8WYK2 163 aa16.91■□□□□ 0.3
CLTCL1-212ENST00000622493 NEK1Q96PY6 1258 aa16.91■□□□□ 0.3
CLTCL1-212ENST00000622493 UPF3BQ9BZI7 483 aaKnown RBP16.91■□□□□ 0.3
CLTCL1-212ENST00000622493 EPB41L4AQ9HCS5 686 aaPredicted RBP16.91■□□□□ 0.3
CLTCL1-212ENST00000622493 PRKAB2O43741 272 aa16.9■□□□□ 0.3
CLTCL1-212ENST00000622493 TDO2P48775 406 aa16.9■□□□□ 0.3
CLTCL1-212ENST00000622493 BLOC1S2Q6QNY1 142 aa16.9■□□□□ 0.3
CLTCL1-212ENST00000622493 SYT17Q9BSW7 474 aa16.9■□□□□ 0.3
CLTCL1-212ENST00000622493 GOLGB1Q14789 3259 aaKnown RBP16.9■□□□□ 0.3
CLTCL1-212ENST00000622493 BTDP43251 543 aa16.9■□□□□ 0.3
CLTCL1-212ENST00000622493 SDR42E1Q8WUS8 393 aa16.9■□□□□ 0.3
CLTCL1-212ENST00000622493 TEKT1Q969V4 418 aa16.9■□□□□ 0.3
CLTCL1-212ENST00000622493 E7EWF7 191 aa16.89■□□□□ 0.29
CLTCL1-212ENST00000622493 K7ELQ4 463 aaPredicted RBP16.89■□□□□ 0.29
CLTCL1-212ENST00000622493 VIL1P09327 827 aaKnown RBP16.89■□□□□ 0.29
CLTCL1-212ENST00000622493 MXD3Q9BW11 206 aa16.89■□□□□ 0.29
CLTCL1-212ENST00000622493 TAF6LQ9Y6J9 622 aa16.89■□□□□ 0.29
CLTCL1-212ENST00000622493 LAMA4Q16363 1823 aa16.89■□□□□ 0.29
CLTCL1-212ENST00000622493 CD2BP2O95400 341 aaKnown RBP16.88■□□□□ 0.29
CLTCL1-212ENST00000622493 TTC14Q96N46 770 aa16.88■□□□□ 0.29
CLTCL1-212ENST00000622493 ALDH8A1Q9H2A2 487 aaPredicted RBP16.88■□□□□ 0.29
CLTCL1-212ENST00000622493 DCP1AQ9NPI6 582 aaPredicted RBP16.88■□□□□ 0.29
CLTCL1-212ENST00000622493 DAGLAQ9Y4D2 1042 aa16.88■□□□□ 0.29
CLTCL1-212ENST00000622493 COL4A5P29400 1685 aa16.88■□□□□ 0.29
CLTCL1-212ENST00000622493 F8W031 263 aaPredicted RBP16.87■□□□□ 0.29
CLTCL1-212ENST00000622493 RPS6KB1P23443 525 aa16.87■□□□□ 0.29
CLTCL1-212ENST00000622493 HAND2P61296 217 aa16.87■□□□□ 0.29
CLTCL1-212ENST00000622493 RSBN1LQ6PCB5 846 aaPredicted RBP16.87■□□□□ 0.29
CLTCL1-212ENST00000622493 STOX1Q6ZVD7 989 aa16.87■□□□□ 0.29
CLTCL1-212ENST00000622493 PDRG1Q9NUG6 133 aa16.87■□□□□ 0.29
CLTCL1-212ENST00000622493 ANAPC4Q9UJX5 808 aa16.87■□□□□ 0.29
CLTCL1-212ENST00000622493 SERPINA10Q9UK55 444 aa16.87■□□□□ 0.29
CLTCL1-212ENST00000622493 TRDNQ13061 729 aa16.87■□□□□ 0.29
CLTCL1-212ENST00000622493 KIAA0825Q8IV33 1275 aa16.87■□□□□ 0.29
CLTCL1-212ENST00000622493 NCOA7Q8NI08 942 aa16.87■□□□□ 0.29
CLTCL1-212ENST00000622493 SH3RF3Q8TEJ3 882 aaPredicted RBP16.87■□□□□ 0.29
CLTCL1-212ENST00000622493 ZDHHC15Q96MV8 337 aa16.87■□□□□ 0.29
CLTCL1-212ENST00000622493 ARPP21Q9UBL0 812 aaPredicted RBP16.87■□□□□ 0.29
CLTCL1-212ENST00000622493 PSMD14O00487 310 aa16.86■□□□□ 0.29
CLTCL1-212ENST00000622493 USP5P45974 858 aa16.86■□□□□ 0.29
CLTCL1-212ENST00000622493 CRKP46108 304 aa16.86■□□□□ 0.29
CLTCL1-212ENST00000622493 MMP14P50281 582 aa16.86■□□□□ 0.29
CLTCL1-212ENST00000622493 RHBDL3P58872 404 aa16.86■□□□□ 0.29
CLTCL1-212ENST00000622493 ANKRD1Q15327 319 aa16.86■□□□□ 0.29
CLTCL1-212ENST00000622493 SBK1Q52WX2 424 aa16.86■□□□□ 0.29
CLTCL1-212ENST00000622493 DHX32Q7L7V1 743 aaKnown RBP16.86■□□□□ 0.29
CLTCL1-212ENST00000622493 AGBL3Q8NEM8 1001 aa16.86■□□□□ 0.29
CLTCL1-212ENST00000622493 MKRN1Q9UHC7 482 aaKnown RBP16.86■□□□□ 0.29
CLTCL1-212ENST00000622493 RAD17O75943 681 aa16.85■□□□□ 0.29
CLTCL1-212ENST00000622493 PCP11498 1178 aaKnown RBP16.85■□□□□ 0.29
CLTCL1-212ENST00000622493 DEKP35659 375 aaKnown RBP16.85■□□□□ 0.29
CLTCL1-212ENST00000622493 SCNN1DP51172 638 aa16.85■□□□□ 0.29
CLTCL1-212ENST00000622493 PPARAQ07869 468 aa16.85■□□□□ 0.29
CLTCL1-212ENST00000622493 TNIP1Q15025 636 aa16.85■□□□□ 0.29
CLTCL1-212ENST00000622493 RNF41Q9H4P4 317 aaPredicted RBP16.85■□□□□ 0.29
CLTCL1-212ENST00000622493 CNNM2Q9H8M5 875 aa16.85■□□□□ 0.29
CLTCL1-212ENST00000622493 TIAM2Q8IVF5 1701 aa16.85■□□□□ 0.29
CLTCL1-212ENST00000622493 SLC4A3P48751 1232 aa16.84■□□□□ 0.29
CLTCL1-212ENST00000622493 CXCL9Q07325 125 aa16.84■□□□□ 0.29
CLTCL1-212ENST00000622493 AKNAD1Q5T1N1 836 aa16.84■□□□□ 0.29
CLTCL1-212ENST00000622493 CIAPIN1Q6FI81 312 aa16.84■□□□□ 0.29
CLTCL1-212ENST00000622493 CTR9Q6PD62 1173 aa16.84■□□□□ 0.29
CLTCL1-212ENST00000622493 RALYLQ86SE5 291 aaKnown RBP16.84■□□□□ 0.29
CLTCL1-212ENST00000622493 TEX11Q8IYF3 940 aa16.84■□□□□ 0.29
CLTCL1-212ENST00000622493 STAG1Q8WVM7 1258 aa16.84■□□□□ 0.29
CLTCL1-212ENST00000622493 GMLQ99445 158 aa16.84■□□□□ 0.29
CLTCL1-212ENST00000622493 NBPF3Q9H094 633 aa16.84■□□□□ 0.29
CLTCL1-212ENST00000622493 HDAC9Q9UKV0 1011 aa16.84■□□□□ 0.29
CLTCL1-212ENST00000622493 WDR19Q8NEZ3 1342 aa16.84■□□□□ 0.29
CLTCL1-212ENST00000622493 USP17L12C9JPN9 530 aa16.84■□□□□ 0.29
CLTCL1-212ENST00000622493 USP17L21D6R901 530 aa16.84■□□□□ 0.29
CLTCL1-212ENST00000622493 CPA1P15085 419 aa16.84■□□□□ 0.29
CLTCL1-212ENST00000622493 AK2P54819 239 aa16.84■□□□□ 0.29
CLTCL1-212ENST00000622493 EXOSC10Q01780 885 aaKnown RBP16.84■□□□□ 0.29
CLTCL1-212ENST00000622493 APOBEC3HQ6NTF7 200 aaKnown RBP16.84■□□□□ 0.29
CLTCL1-212ENST00000622493 MFSD6Q6ZSS7 791 aa16.84■□□□□ 0.29
CLTCL1-212ENST00000622493 AMOTL1Q8IY63 956 aa16.84■□□□□ 0.29
CLTCL1-212ENST00000622493 FBXL16Q8N461 479 aa16.84■□□□□ 0.29
CLTCL1-212ENST00000622493 OGFOD1Q8N543 542 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms