RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 HIP1RO75146 1068 aa5.65□□□□□ -1.51
VPS13D-214ENST00000620676 ATP1A3P13637 1013 aa5.65□□□□□ -1.51
VPS13D-214ENST00000620676 TOM1L2Q6ZVM7 507 aa5.65□□□□□ -1.51
VPS13D-214ENST00000620676 ZNF174Q15697 407 aa5.65□□□□□ -1.51
VPS13D-214ENST00000620676 LMBRD2Q68DH5 695 aaPredicted RBP5.65□□□□□ -1.51
VPS13D-214ENST00000620676 PIP4K2CQ8TBX8 421 aa5.65□□□□□ -1.51
VPS13D-214ENST00000620676 TRIM7Q9C029 511 aa5.65□□□□□ -1.51
VPS13D-214ENST00000620676 TPCN1Q9ULQ1 816 aa5.65□□□□□ -1.51
VPS13D-214ENST00000620676 ANKRD30BQ9BXX2 1392 aa5.65□□□□□ -1.51
VPS13D-214ENST00000620676 LRRD1A4D1F6 860 aa5.65□□□□□ -1.51
VPS13D-214ENST00000620676 TMEM232C9JQI7 657 aa5.65□□□□□ -1.51
VPS13D-214ENST00000620676 KRT71Q3SY84 523 aa5.65□□□□□ -1.51
VPS13D-214ENST00000620676 MPHOSPH8Q99549 860 aa5.65□□□□□ -1.51
VPS13D-214ENST00000620676 CEP104O60308 925 aa5.65□□□□□ -1.51
VPS13D-214ENST00000620676 PPP2R5CQ13362 524 aa5.65□□□□□ -1.51
VPS13D-214ENST00000620676 SF3B2Q13435 895 aaKnown RBP5.65□□□□□ -1.51
VPS13D-214ENST00000620676 LLGL1Q15334 1064 aa5.65□□□□□ -1.51
VPS13D-214ENST00000620676 ZDHHC9Q9Y397 364 aa5.65□□□□□ -1.51
VPS13D-214ENST00000620676 SLC4A4Q9Y6R1 1079 aa5.65□□□□□ -1.51
VPS13D-214ENST00000620676 BUB1O43683 1085 aa5.64□□□□□ -1.51
VPS13D-214ENST00000620676 SLCO1A2P46721 670 aa5.64□□□□□ -1.51
VPS13D-214ENST00000620676 RABGGTAQ92696 567 aa5.64□□□□□ -1.51
VPS13D-214ENST00000620676 TSPYL2Q9H2G4 693 aaPredicted RBP5.64□□□□□ -1.51
VPS13D-214ENST00000620676 GOLGA8AA7E2F4 631 aa5.64□□□□□ -1.51
VPS13D-214ENST00000620676 ELF1P32519 619 aa5.64□□□□□ -1.51
VPS13D-214ENST00000620676 CASP8Q14790 479 aa5.64□□□□□ -1.51
VPS13D-214ENST00000620676 CCDC40Q4G0X9 1142 aa5.64□□□□□ -1.51
VPS13D-214ENST00000620676 TYW1BQ6NUM6 668 aa5.64□□□□□ -1.51
VPS13D-214ENST00000620676 MLXIPLQ9NP71 852 aa5.64□□□□□ -1.51
VPS13D-214ENST00000620676 TMA7Q9Y2S6 64 aaKnown RBP5.64□□□□□ -1.51
VPS13D-214ENST00000620676 TRPA1O75762 1119 aa5.64□□□□□ -1.51
VPS13D-214ENST00000620676 SPATS2Q86XZ4 545 aaKnown RBP5.64□□□□□ -1.51
VPS13D-214ENST00000620676 DPH5Q9H2P9 285 aa5.64□□□□□ -1.51
VPS13D-214ENST00000620676 RASSF2P50749 326 aa5.64□□□□□ -1.51
VPS13D-214ENST00000620676 GDAP1Q8TB36 358 aa5.64□□□□□ -1.51
VPS13D-214ENST00000620676 KAT14Q9H8E8 782 aa5.64□□□□□ -1.51
VPS13D-214ENST00000620676 IFT20Q8IY31 132 aa5.64□□□□□ -1.51
VPS13D-214ENST00000620676 VCXQ9H320 206 aa5.64□□□□□ -1.51
VPS13D-214ENST00000620676 NKIRAS1Q9NYS0 192 aa5.64□□□□□ -1.51
VPS13D-214ENST00000620676 PLA2G4AP47712 749 aa5.64□□□□□ -1.51
VPS13D-214ENST00000620676 CCDC92Q53HC0 331 aaPredicted RBP5.64□□□□□ -1.51
VPS13D-214ENST00000620676 TMEM67Q5HYA8 995 aa5.64□□□□□ -1.51
VPS13D-214ENST00000620676 C6orf163Q5TEZ5 329 aa5.64□□□□□ -1.51
VPS13D-214ENST00000620676 SPAG5Q96R06 1193 aa5.64□□□□□ -1.51
VPS13D-214ENST00000620676 MCM7P33993 719 aa5.64□□□□□ -1.51
VPS13D-214ENST00000620676 ZSCAN16Q9H4T2 348 aaPredicted RBP5.64□□□□□ -1.51
VPS13D-214ENST00000620676 CD2APQ9Y5K6 639 aa5.64□□□□□ -1.51
VPS13D-214ENST00000620676 EHBP1Q8NDI1 1231 aa5.64□□□□□ -1.51
VPS13D-214ENST00000620676 GOLGA8KD6RF30 607 aa5.64□□□□□ -1.51
VPS13D-214ENST00000620676 RBL2Q08999 1139 aa5.64□□□□□ -1.51
VPS13D-214ENST00000620676 DPCR1Q3MIW9 517 aa5.64□□□□□ -1.51
VPS13D-214ENST00000620676 EAPPQ56P03 285 aaPredicted RBP5.64□□□□□ -1.51
VPS13D-214ENST00000620676 SH2D3CQ8N5H7 860 aa5.64□□□□□ -1.51
VPS13D-214ENST00000620676 CXorf38Q8TB03 319 aa5.64□□□□□ -1.51
VPS13D-214ENST00000620676 PPFIA4O75335 1185 aa5.64□□□□□ -1.51
VPS13D-214ENST00000620676 NDUFA8P51970 172 aa5.64□□□□□ -1.51
VPS13D-214ENST00000620676 KIF5AQ12840 1032 aa5.64□□□□□ -1.51
VPS13D-214ENST00000620676 SEMA3FQ13275 785 aa5.64□□□□□ -1.51
VPS13D-214ENST00000620676 CEP70Q8NHQ1 597 aa5.64□□□□□ -1.51
VPS13D-214ENST00000620676 KCNH3Q9ULD8 1083 aa5.64□□□□□ -1.51
VPS13D-214ENST00000620676 INTS4Q96HW7 963 aaKnown RBP5.64□□□□□ -1.51
VPS13D-214ENST00000620676 ECHDC1Q9NTX5 307 aa5.64□□□□□ -1.51
VPS13D-214ENST00000620676 hCG_1642624A0A1W2PR95 340 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 H3BQF6 201 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 HIBCHQ6NVY1 386 aaPredicted RBP5.63□□□□□ -1.51
VPS13D-214ENST00000620676 KIF1BPQ96EK5 621 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 FGD4Q96M96 766 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 TUBB4AP04350 444 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 PPFIBP2Q8ND30 876 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 TRIM58Q8NG06 486 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 CDK19Q9BWU1 502 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 TPP2P29144 1249 aaPredicted RBP5.63□□□□□ -1.51
VPS13D-214ENST00000620676 DDX46Q7L014 1031 aaKnown RBP5.63□□□□□ -1.51
VPS13D-214ENST00000620676 GBP7Q8N8V2 638 aaPredicted RBP5.63□□□□□ -1.51
VPS13D-214ENST00000620676 PHACTR3Q96KR7 559 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 AATFQ9NY61 560 aaKnown RBP eCLIP5.63□□□□□ -1.51
VPS13D-214ENST00000620676 FAF1Q9UNN5 650 aaPredicted RBP5.63□□□□□ -1.51
VPS13D-214ENST00000620676 FHOD1Q9Y613 1164 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 ELP1O95163 1332 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 IFIT3O14879 490 aaKnown RBP5.63□□□□□ -1.51
VPS13D-214ENST00000620676 RBM5P52756 815 aaKnown RBP eCLIP5.63□□□□□ -1.51
VPS13D-214ENST00000620676 APBA1Q02410 837 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 LRRC31Q6UY01 552 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 CNNM1Q9NRU3 951 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 DONSONQ9NYP3 566 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 LUC7L3O95232 432 aaKnown RBP5.63□□□□□ -1.51
VPS13D-214ENST00000620676 CYLC1P35663 651 aaPredicted RBP5.63□□□□□ -1.51
VPS13D-214ENST00000620676 METAP2P50579 478 aaKnown RBP eCLIP5.63□□□□□ -1.51
VPS13D-214ENST00000620676 SPDYE1Q8NFV5 336 aaPredicted RBP5.63□□□□□ -1.51
VPS13D-214ENST00000620676 XAB2Q9HCS7 855 aaKnown RBP5.63□□□□□ -1.51
VPS13D-214ENST00000620676 HOMER2Q9NSB8 354 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 ZBTB21Q9ULJ3 1066 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 TBC1D2BQ9UPU7 963 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 RAD54L2Q9Y4B4 1467 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 MAP7Q14244 749 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 RPGRQ92834 1020 aaKnown RBP5.63□□□□□ -1.51
VPS13D-214ENST00000620676 MCUR1Q96AQ8 359 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 PRAM1Q96QH2 718 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 EXOC1Q9NV70 894 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 KRT86O43790 486 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms