RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 ABCF2Q9UG63 623 aa21.21■□□□□ 0.99
HMGN3-203ENST00000620514 IGF2BP3O00425 579 aaKnown RBP eCLIP21.2■□□□□ 0.98
HMGN3-203ENST00000620514 MAP3K9P80192 1104 aa21.2■□□□□ 0.98
HMGN3-203ENST00000620514 VGLL4Q14135 290 aa21.2■□□□□ 0.98
HMGN3-203ENST00000620514 IFNL1Q8IU54 200 aa21.2■□□□□ 0.98
HMGN3-203ENST00000620514 PANK1Q8TE04 598 aa21.2■□□□□ 0.98
HMGN3-203ENST00000620514 ZNF296Q8WUU4 475 aaPredicted RBP21.2■□□□□ 0.98
HMGN3-203ENST00000620514 OPTNQ96CV9 577 aa21.2■□□□□ 0.98
HMGN3-203ENST00000620514 USP40Q9NVE5 1235 aa21.2■□□□□ 0.98
HMGN3-203ENST00000620514 PDS5AQ29RF7 1337 aaKnown RBP21.2■□□□□ 0.98
HMGN3-203ENST00000620514 GPR25O00155 361 aa21.19■□□□□ 0.98
HMGN3-203ENST00000620514 TCP10Q12799 353 aa21.19■□□□□ 0.98
HMGN3-203ENST00000620514 GORABQ5T7V8 394 aa21.19■□□□□ 0.98
HMGN3-203ENST00000620514 PI16Q6UXB8 463 aa21.19■□□□□ 0.98
HMGN3-203ENST00000620514 ZGPATQ8N5A5 531 aaKnown RBP21.19■□□□□ 0.98
HMGN3-203ENST00000620514 FAM151AQ8WW52 585 aa21.19■□□□□ 0.98
HMGN3-203ENST00000620514 HMG20BQ9P0W2 317 aa21.19■□□□□ 0.98
HMGN3-203ENST00000620514 RPAP1Q9BWH6 1393 aaPredicted RBP21.19■□□□□ 0.98
HMGN3-203ENST00000620514 INHBEP58166 350 aa21.18■□□□□ 0.98
HMGN3-203ENST00000620514 DZIP1Q86YF9 867 aaKnown RBP21.18■□□□□ 0.98
HMGN3-203ENST00000620514 CFHR5Q9BXR6 569 aa21.18■□□□□ 0.98
HMGN3-203ENST00000620514 FAM198AQ9UFP1 575 aa21.18■□□□□ 0.98
HMGN3-203ENST00000620514 LAMB1P07942 1786 aa21.18■□□□□ 0.98
HMGN3-203ENST00000620514 SURF6O75683 361 aaKnown RBP21.17■□□□□ 0.98
HMGN3-203ENST00000620514 OS9Q13438 667 aaPredicted RBP21.17■□□□□ 0.98
HMGN3-203ENST00000620514 MIGA2Q7L4E1 593 aa21.17■□□□□ 0.98
HMGN3-203ENST00000620514 CTU1Q7Z7A3 348 aaKnown RBP21.17■□□□□ 0.98
HMGN3-203ENST00000620514 ZFPM1Q8IX07 1006 aa21.17■□□□□ 0.98
HMGN3-203ENST00000620514 WRNIP1Q96S55 665 aa21.17■□□□□ 0.98
HMGN3-203ENST00000620514 CSADQ9Y600 493 aa21.17■□□□□ 0.98
HMGN3-203ENST00000620514 GAKO14976 1311 aa21.17■□□□□ 0.98
HMGN3-203ENST00000620514 MYH2Q9UKX2 1941 aa21.16■□□□□ 0.98
HMGN3-203ENST00000620514 ALDH1A1P00352 501 aa21.16■□□□□ 0.98
HMGN3-203ENST00000620514 ARID4AP29374 1257 aaPredicted RBP21.16■□□□□ 0.98
HMGN3-203ENST00000620514 TBC1D9Q6ZT07 1266 aa21.16■□□□□ 0.98
HMGN3-203ENST00000620514 SPATA5Q8NB90 893 aa21.16■□□□□ 0.98
HMGN3-203ENST00000620514 ZNF384Q8TF68 577 aa21.16■□□□□ 0.98
HMGN3-203ENST00000620514 ZKSCAN4Q969J2 545 aaPredicted RBP21.16■□□□□ 0.98
HMGN3-203ENST00000620514 PTPN18Q99952 460 aa21.16■□□□□ 0.98
HMGN3-203ENST00000620514 SNCAIPQ9Y6H5 919 aa21.16■□□□□ 0.98
HMGN3-203ENST00000620514 TESPA1A2RU30 521 aaPredicted RBP21.15■□□□□ 0.98
HMGN3-203ENST00000620514 MCAMP43121 646 aa21.15■□□□□ 0.98
HMGN3-203ENST00000620514 TNNI3KQ59H18 835 aa21.15■□□□□ 0.98
HMGN3-203ENST00000620514 NOM1Q5C9Z4 860 aaKnown RBP21.15■□□□□ 0.98
HMGN3-203ENST00000620514 DCAF15Q66K64 600 aa21.15■□□□□ 0.98
HMGN3-203ENST00000620514 SPTY2D1Q68D10 685 aaPredicted RBP21.15■□□□□ 0.98
HMGN3-203ENST00000620514 ERICH6Q7L0X2 663 aa21.15■□□□□ 0.98
HMGN3-203ENST00000620514 HOOK2Q96ED9 719 aa21.15■□□□□ 0.98
HMGN3-203ENST00000620514 OTUD5Q96G74 571 aa21.15■□□□□ 0.98
HMGN3-203ENST00000620514 MS4A4AQ96JQ5 239 aa21.15■□□□□ 0.98
HMGN3-203ENST00000620514 DBNDD2Q9BQY9 259 aa21.15■□□□□ 0.98
HMGN3-203ENST00000620514 FPGT-TNNI3KV9GXZ4 949 aa21.15■□□□□ 0.98
HMGN3-203ENST00000620514 MECOMQ03112 1051 aa21.14■□□□□ 0.97
HMGN3-203ENST00000620514 CEP85Q6P2H3 762 aa21.14■□□□□ 0.97
HMGN3-203ENST00000620514 FAM163AQ96GL9 167 aaPredicted RBP21.14■□□□□ 0.97
HMGN3-203ENST00000620514 ZNF341Q9BYN7 854 aa21.14■□□□□ 0.97
HMGN3-203ENST00000620514 GPR108Q9NPR9 543 aa21.14■□□□□ 0.97
HMGN3-203ENST00000620514 NOP58Q9Y2X3 529 aaKnown RBP21.14■□□□□ 0.97
HMGN3-203ENST00000620514 MROH7-TTC4A0A0A0MT08 1334 aa21.13■□□□□ 0.97
HMGN3-203ENST00000620514 SPDYE5A6NIY4 337 aa21.13■□□□□ 0.97
HMGN3-203ENST00000620514 FKTNO75072 461 aa21.13■□□□□ 0.97
HMGN3-203ENST00000620514 INPP5BP32019 993 aa21.13■□□□□ 0.97
HMGN3-203ENST00000620514 BTDP43251 543 aa21.13■□□□□ 0.97
HMGN3-203ENST00000620514 RGS3P49796 1198 aa21.13■□□□□ 0.97
HMGN3-203ENST00000620514 BRI3BPQ8WY22 251 aa21.13■□□□□ 0.97
HMGN3-203ENST00000620514 RFX7Q2KHR2 1363 aa21.12■□□□□ 0.97
HMGN3-203ENST00000620514 UQCRFS1P1P0C7P4 283 aa21.12■□□□□ 0.97
HMGN3-203ENST00000620514 SLF2Q8IX21 1173 aa21.12■□□□□ 0.97
HMGN3-203ENST00000620514 IDI2Q9BXS1 227 aa21.12■□□□□ 0.97
HMGN3-203ENST00000620514 SNRKQ9NRH2 765 aa21.12■□□□□ 0.97
HMGN3-203ENST00000620514 AK9Q5TCS8 1911 aa21.12■□□□□ 0.97
HMGN3-203ENST00000620514 CCL15-CCL14A0A0B4J2E2 113 aa21.11■□□□□ 0.97
HMGN3-203ENST00000620514 WDHD1O75717 1129 aaPredicted RBP21.11■□□□□ 0.97
HMGN3-203ENST00000620514 GTF2A2P52657 109 aa21.11■□□□□ 0.97
HMGN3-203ENST00000620514 CRHR2Q13324 411 aa21.11■□□□□ 0.97
HMGN3-203ENST00000620514 CCL15Q16663 113 aa21.11■□□□□ 0.97
HMGN3-203ENST00000620514 TTC39AQ5SRH9 613 aa21.11■□□□□ 0.97
HMGN3-203ENST00000620514 OTUD7BQ6GQQ9 843 aa21.11■□□□□ 0.97
HMGN3-203ENST00000620514 SH3BP5LQ7L8J4 393 aa21.11■□□□□ 0.97
HMGN3-203ENST00000620514 ERO1BQ86YB8 467 aa21.11■□□□□ 0.97
HMGN3-203ENST00000620514 NSUN4Q96CB9 384 aaKnown RBP21.11■□□□□ 0.97
HMGN3-203ENST00000620514 DDX4Q9NQI0 724 aaKnown RBP21.11■□□□□ 0.97
HMGN3-203ENST00000620514 ZNF112Q9UJU3 913 aa21.11■□□□□ 0.97
HMGN3-203ENST00000620514 GPR75-ASB3A0A0A6YYF3 556 aa21.1■□□□□ 0.97
HMGN3-203ENST00000620514 ENTPD3O75355 529 aa21.1■□□□□ 0.97
HMGN3-203ENST00000620514 RHBDL3P58872 404 aa21.1■□□□□ 0.97
HMGN3-203ENST00000620514 TLR7Q9NYK1 1049 aaKnown RBP21.1■□□□□ 0.97
HMGN3-203ENST00000620514 RAI14Q9P0K7 980 aa21.1■□□□□ 0.97
HMGN3-203ENST00000620514 IRF6O14896 467 aa21.09■□□□□ 0.97
HMGN3-203ENST00000620514 SLURP2P0DP57 97 aa21.09■□□□□ 0.97
HMGN3-203ENST00000620514 PICALMQ13492 652 aa21.09■□□□□ 0.97
HMGN3-203ENST00000620514 CCDC8Q9H0W5 538 aaPredicted RBP21.09■□□□□ 0.97
HMGN3-203ENST00000620514 DBNLQ9UJU6 430 aaKnown RBP21.09■□□□□ 0.97
HMGN3-203ENST00000620514 RCAN3Q9UKA8 241 aa21.09■□□□□ 0.97
HMGN3-203ENST00000620514 EXOC6BQ9Y2D4 811 aa21.09■□□□□ 0.97
HMGN3-203ENST00000620514 COG6Q9Y2V7 657 aa21.09■□□□□ 0.97
HMGN3-203ENST00000620514 ATRNL1Q5VV63 1379 aa21.09■□□□□ 0.97
HMGN3-203ENST00000620514 MS4A1P11836 297 aa21.08■□□□□ 0.97
HMGN3-203ENST00000620514 PPIL2Q13356 520 aa21.08■□□□□ 0.97
HMGN3-203ENST00000620514 CCDC158Q5M9N0 1113 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms