RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 MRPL44Q9H9J2 332 aaKnown RBP11.15□□□□□ -0.62
TNFAIP3-210ENST00000620204 HMG20BQ9P0W2 317 aa11.15□□□□□ -0.62
TNFAIP3-210ENST00000620204 A0A0U1RQJ8 604 aa11.15□□□□□ -0.63
TNFAIP3-210ENST00000620204 CUTAO60888 179 aa11.15□□□□□ -0.63
TNFAIP3-210ENST00000620204 ATP2C2O75185 946 aa11.15□□□□□ -0.63
TNFAIP3-210ENST00000620204 PLEKHO1Q53GL0 409 aaPredicted RBP11.15□□□□□ -0.63
TNFAIP3-210ENST00000620204 NCAPH2Q6IBW4 605 aa11.15□□□□□ -0.63
TNFAIP3-210ENST00000620204 GSPT2Q8IYD1 628 aaKnown RBP11.15□□□□□ -0.63
TNFAIP3-210ENST00000620204 FAM71BQ8TC56 605 aa11.15□□□□□ -0.63
TNFAIP3-210ENST00000620204 KCNG4Q8TDN1 519 aa11.15□□□□□ -0.63
TNFAIP3-210ENST00000620204 ATRIPQ8WXE1 791 aa11.15□□□□□ -0.63
TNFAIP3-210ENST00000620204 GPHNQ9NQX3 736 aaPredicted RBP11.15□□□□□ -0.63
TNFAIP3-210ENST00000620204 GUCA1BQ9UMX6 200 aa11.15□□□□□ -0.63
TNFAIP3-210ENST00000620204 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.15□□□□□ -0.63
TNFAIP3-210ENST00000620204 GNAT3A8MTJ3 354 aa11.14□□□□□ -0.63
TNFAIP3-210ENST00000620204 POTEB2H3BUK9 544 aa11.14□□□□□ -0.63
TNFAIP3-210ENST00000620204 CYP21A2P08686 494 aa11.14□□□□□ -0.63
TNFAIP3-210ENST00000620204 PDE6BP35913 854 aa11.14□□□□□ -0.63
TNFAIP3-210ENST00000620204 CADPS2Q86UW7 1296 aa11.14□□□□□ -0.63
TNFAIP3-210ENST00000620204 VSTM4Q8IW00 320 aa11.14□□□□□ -0.63
TNFAIP3-210ENST00000620204 SLC35F6Q8N357 371 aa11.14□□□□□ -0.63
TNFAIP3-210ENST00000620204 CLIC6Q96NY7 704 aa11.14□□□□□ -0.63
TNFAIP3-210ENST00000620204 CDC23Q9UJX2 597 aa11.14□□□□□ -0.63
TNFAIP3-210ENST00000620204 SLIT1O75093 1534 aa11.14□□□□□ -0.63
TNFAIP3-210ENST00000620204 ENC1O14682 589 aa11.14□□□□□ -0.63
TNFAIP3-210ENST00000620204 RXRAP19793 462 aa11.14□□□□□ -0.63
TNFAIP3-210ENST00000620204 EIF5P55010 431 aaKnown RBP11.14□□□□□ -0.63
TNFAIP3-210ENST00000620204 MRPS25P82663 173 aaKnown RBP11.14□□□□□ -0.63
TNFAIP3-210ENST00000620204 NOC3LQ8WTT2 800 aaKnown RBP11.14□□□□□ -0.63
TNFAIP3-210ENST00000620204 EHD4Q9H223 541 aa11.14□□□□□ -0.63
TNFAIP3-210ENST00000620204 FAM169AQ9Y6X4 670 aa11.14□□□□□ -0.63
TNFAIP3-210ENST00000620204 TAF5LO75529 589 aa11.14□□□□□ -0.63
TNFAIP3-210ENST00000620204 OTUD6BQ8N6M0 293 aa11.14□□□□□ -0.63
TNFAIP3-210ENST00000620204 FAM76AQ8TAV0 307 aa11.14□□□□□ -0.63
TNFAIP3-210ENST00000620204 ZNF526Q8TF50 670 aaPredicted RBP11.14□□□□□ -0.63
TNFAIP3-210ENST00000620204 MAP3K2Q9Y2U5 619 aa11.14□□□□□ -0.63
TNFAIP3-210ENST00000620204 COBLO75128 1261 aa11.13□□□□□ -0.63
TNFAIP3-210ENST00000620204 NAA16Q6N069 864 aaPredicted RBP11.13□□□□□ -0.63
TNFAIP3-210ENST00000620204 RSRC2Q7L4I2 434 aaKnown RBP11.13□□□□□ -0.63
TNFAIP3-210ENST00000620204 SLC24A3Q9HC58 644 aa11.13□□□□□ -0.63
TNFAIP3-210ENST00000620204 DIP2AQ14689 1571 aa11.13□□□□□ -0.63
TNFAIP3-210ENST00000620204 ADD1P35611 737 aaKnown RBP11.13□□□□□ -0.63
TNFAIP3-210ENST00000620204 CCDC102BQ68D86 513 aa11.13□□□□□ -0.63
TNFAIP3-210ENST00000620204 SPECC1LQ69YQ0 1117 aa11.13□□□□□ -0.63
TNFAIP3-210ENST00000620204 DHX32Q7L7V1 743 aaKnown RBP11.13□□□□□ -0.63
TNFAIP3-210ENST00000620204 RPAINQ86UA6 219 aa11.13□□□□□ -0.63
TNFAIP3-210ENST00000620204 CCDC82Q8N4S0 544 aa11.13□□□□□ -0.63
TNFAIP3-210ENST00000620204 IGSF22Q8N9C0 903 aa11.13□□□□□ -0.63
TNFAIP3-210ENST00000620204 LINC00301Q8NCQ3 95 aa11.13□□□□□ -0.63
TNFAIP3-210ENST00000620204 FLT4P35916 1363 aa11.13□□□□□ -0.63
TNFAIP3-210ENST00000620204 GOLGA6CA6NDK9 693 aa11.13□□□□□ -0.63
TNFAIP3-210ENST00000620204 LRRIQ3A6PVS8 624 aaPredicted RBP11.13□□□□□ -0.63
TNFAIP3-210ENST00000620204 GOLGA6DP0CG33 693 aa11.13□□□□□ -0.63
TNFAIP3-210ENST00000620204 HNRNPH1P31943 449 aaKnown RBP11.13□□□□□ -0.63
TNFAIP3-210ENST00000620204 ZNF530Q6P9A1 599 aaPredicted RBP11.13□□□□□ -0.63
TNFAIP3-210ENST00000620204 MPRIPQ6WCQ1 1025 aa11.13□□□□□ -0.63
TNFAIP3-210ENST00000620204 NOA1Q8NC60 698 aaKnown RBP11.13□□□□□ -0.63
TNFAIP3-210ENST00000620204 PRDM11Q9NQV5 511 aa11.13□□□□□ -0.63
TNFAIP3-210ENST00000620204 GOLGA6AQ9NYA3 693 aa11.13□□□□□ -0.63
TNFAIP3-210ENST00000620204 NDUFAB1O14561 156 aa11.12□□□□□ -0.63
TNFAIP3-210ENST00000620204 NEBLO76041 1014 aa11.12□□□□□ -0.63
TNFAIP3-210ENST00000620204 BRD2P25440 801 aaKnown RBP11.12□□□□□ -0.63
TNFAIP3-210ENST00000620204 NCAPHQ15003 741 aa11.12□□□□□ -0.63
TNFAIP3-210ENST00000620204 WASHC4Q2M389 1173 aa11.12□□□□□ -0.63
TNFAIP3-210ENST00000620204 CNPY4Q8N129 248 aa11.12□□□□□ -0.63
TNFAIP3-210ENST00000620204 ACRBPQ8NEB7 543 aa11.12□□□□□ -0.63
TNFAIP3-210ENST00000620204 ANKZF1Q9H8Y5 726 aa11.12□□□□□ -0.63
TNFAIP3-210ENST00000620204 L1RE1Q9UN81 338 aa11.12□□□□□ -0.63
TNFAIP3-210ENST00000620204 PCDHA5Q9Y5H7 936 aa11.12□□□□□ -0.63
TNFAIP3-210ENST00000620204 U3KPZ7 1027 aaPredicted RBP11.12□□□□□ -0.63
TNFAIP3-210ENST00000620204 GOLGA8BA8MQT2 603 aa11.12□□□□□ -0.63
TNFAIP3-210ENST00000620204 STX10O60499 249 aa11.12□□□□□ -0.63
TNFAIP3-210ENST00000620204 GIGYF1O75420 1035 aaPredicted RBP11.12□□□□□ -0.63
TNFAIP3-210ENST00000620204 PSEN1P49768 467 aa11.12□□□□□ -0.63
TNFAIP3-210ENST00000620204 CDR1P51861 262 aa11.12□□□□□ -0.63
TNFAIP3-210ENST00000620204 STIM1Q13586 685 aa11.12□□□□□ -0.63
TNFAIP3-210ENST00000620204 AKR1B15C9JRZ8 316 aaPredicted RBP11.12□□□□□ -0.63
TNFAIP3-210ENST00000620204 NF2P35240 595 aa11.12□□□□□ -0.63
TNFAIP3-210ENST00000620204 ATP1A2P50993 1020 aa11.12□□□□□ -0.63
TNFAIP3-210ENST00000620204 C1orf141Q5JVX7 400 aa11.12□□□□□ -0.63
TNFAIP3-210ENST00000620204 ANO1Q5XXA6 986 aa11.12□□□□□ -0.63
TNFAIP3-210ENST00000620204 ANKRD24Q8TF21 1146 aa11.12□□□□□ -0.63
TNFAIP3-210ENST00000620204 EXOC5O00471 708 aa11.11□□□□□ -0.63
TNFAIP3-210ENST00000620204 EVA1CP58658 441 aa11.11□□□□□ -0.63
TNFAIP3-210ENST00000620204 GNGT1P63211 74 aa11.11□□□□□ -0.63
TNFAIP3-210ENST00000620204 POLA2Q14181 598 aa11.11□□□□□ -0.63
TNFAIP3-210ENST00000620204 KCNH5Q8NCM2 988 aa11.11□□□□□ -0.63
TNFAIP3-210ENST00000620204 SAMSN1Q9NSI8 373 aaKnown RBP11.11□□□□□ -0.63
TNFAIP3-210ENST00000620204 CDC42BPGQ6DT37 1551 aa11.11□□□□□ -0.63
TNFAIP3-210ENST00000620204 MAP2P11137 1827 aaKnown RBP11.11□□□□□ -0.63
TNFAIP3-210ENST00000620204 GOLIM4O00461 696 aa11.11□□□□□ -0.63
TNFAIP3-210ENST00000620204 MAP2K7O14733 419 aa11.11□□□□□ -0.63
TNFAIP3-210ENST00000620204 CHRM1P11229 460 aaPredicted RBP11.11□□□□□ -0.63
TNFAIP3-210ENST00000620204 MYSM1Q5VVJ2 828 aa11.11□□□□□ -0.63
TNFAIP3-210ENST00000620204 IL17RAQ96F46 866 aa11.11□□□□□ -0.63
TNFAIP3-210ENST00000620204 NUP88Q99567 741 aaPredicted RBP11.11□□□□□ -0.63
TNFAIP3-210ENST00000620204 SLF1Q9BQI6 1058 aa11.11□□□□□ -0.63
TNFAIP3-210ENST00000620204 UBXN6Q9BZV1 441 aa11.11□□□□□ -0.63
TNFAIP3-210ENST00000620204 KAT6BQ8WYB5 2073 aa11.11□□□□□ -0.63
TNFAIP3-210ENST00000620204 KLF18A0A0U1RQI7 1052 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms