RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 EVI5O60447 810 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 HIP1RO75146 1068 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 MAATS1Q7Z4T9 603 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 MSL3Q8N5Y2 521 aaKnown RBP3.47□□□□□ -1.85
NEB-220ENST00000618972 CALR3Q96L12 384 aaKnown RBP3.47□□□□□ -1.85
NEB-220ENST00000618972 XPO4Q9C0E2 1151 aaKnown RBP3.47□□□□□ -1.85
NEB-220ENST00000618972 ESRRBO95718 433 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 ESCO1Q5FWF5 840 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 MICALL1Q8N3F8 863 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 PRPF38AQ8NAV1 312 aaKnown RBP3.47□□□□□ -1.85
NEB-220ENST00000618972 CCDC26Q8TAB7 109 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 DRC1Q96MC2 740 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 DKK3Q9UBP4 350 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 SNAPC5O75971 98 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 TOP1P11387 765 aaKnown RBP3.47□□□□□ -1.85
NEB-220ENST00000618972 CNGA1P29973 690 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 CCHCR1Q8TD31 782 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 PHKBQ93100 1093 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 EXOC4Q96A65 974 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 VAT1LQ9HCJ6 419 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 TRIM10Q9UDY6 481 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 CYP2D7A0A087X1C5 515 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 GNG11P61952 73 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 SCARF1Q14162 830 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 AP1ARQ63HQ0 302 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 OSBP2Q969R2 916 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 TRAF1Q13077 416 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 PNOCQ13519 176 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 MCF2L2Q86YR7 1114 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 BACH1O14867 736 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 VAV2P52735 878 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 ESRRGP62508 458 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 MPHOSPH6Q99547 160 aaKnown RBP3.47□□□□□ -1.85
NEB-220ENST00000618972 FAM184BQ9ULE4 1060 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 DAAM1Q9Y4D1 1078 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 FAM205CA6NFA0 338 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 POLA2Q14181 598 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 NAA25Q14CX7 972 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 NECTIN1Q15223 517 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 CTAGE15A4D2H0 777 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 DNA2P51530 1060 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 CCDC102BQ68D86 513 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 FERMT1Q9BQL6 677 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 PRC1O43663 620 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 SART3Q15020 963 aaKnown RBP3.47□□□□□ -1.85
NEB-220ENST00000618972 ZNF496Q96IT1 587 aaPredicted RBP3.47□□□□□ -1.85
NEB-220ENST00000618972 MOV10L1Q9BXT6 1211 aaKnown RBP3.47□□□□□ -1.85
NEB-220ENST00000618972 PFDN1O60925 122 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 INPP5BP32019 993 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 ZNF365Q70YC5 407 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 BTBD11A6QL63 1104 aa3.46□□□□□ -1.85
NEB-220ENST00000618972 PDIA3P30101 505 aaKnown RBP3.46□□□□□ -1.85
NEB-220ENST00000618972 MAP3K19Q56UN5 1328 aa3.46□□□□□ -1.85
NEB-220ENST00000618972 CTDSPL2Q05D32 466 aa3.46□□□□□ -1.85
NEB-220ENST00000618972 PPP2R5BQ15173 497 aa3.46□□□□□ -1.85
NEB-220ENST00000618972 TERF2Q15554 542 aa3.46□□□□□ -1.85
NEB-220ENST00000618972 P3H4Q92791 437 aa3.46□□□□□ -1.85
NEB-220ENST00000618972 CABS1Q96KC9 395 aa3.46□□□□□ -1.85
NEB-220ENST00000618972 ANKRD27Q96NW4 1050 aa3.46□□□□□ -1.85
NEB-220ENST00000618972 IQCGQ9H095 443 aaKnown RBP3.46□□□□□ -1.85
NEB-220ENST00000618972 ACEP12821 1306 aa3.46□□□□□ -1.85
NEB-220ENST00000618972 PPP1R12AO14974 1030 aaPredicted RBP3.46□□□□□ -1.85
NEB-220ENST00000618972 FDPSP14324 419 aaKnown RBP3.46□□□□□ -1.85
NEB-220ENST00000618972 ILDR1Q86SU0 546 aaPredicted RBP3.46□□□□□ -1.85
NEB-220ENST00000618972 MED15Q96RN5 788 aa3.46□□□□□ -1.85
NEB-220ENST00000618972 LRRD1A4D1F6 860 aa3.46□□□□□ -1.85
NEB-220ENST00000618972 RNF216Q9NWF9 866 aaPredicted RBP3.46□□□□□ -1.85
NEB-220ENST00000618972 DUSP10Q9Y6W6 482 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 SPECC1L-ADORA2AF8WAN1 911 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 FERP16591 822 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 Q9H521 79 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 CTDP1Q9Y5B0 961 aaPredicted RBP3.46□□□□□ -1.86
NEB-220ENST00000618972 KIF9Q9HAQ2 790 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 SAMSN1Q9NSI8 373 aaKnown RBP3.46□□□□□ -1.86
NEB-220ENST00000618972 ZNF202O95125 648 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 FBXO38Q6PIJ6 1188 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 ZNF280CQ8ND82 737 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 ERO1AQ96HE7 468 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 SASH3O75995 380 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 NEBLO76041 1014 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 LMAN1P49257 510 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 E4F1Q66K89 784 aaPredicted RBP3.46□□□□□ -1.86
NEB-220ENST00000618972 GPRASP1Q5JY77 1395 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 MYOM3Q5VTT5 1437 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 MATR3P43243 847 aaKnown RBP eCLIP3.46□□□□□ -1.86
NEB-220ENST00000618972 MAP3K7CLP57077 242 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 MIER3Q7Z3K6 550 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 NSRP1Q9H0G5 558 aaKnown RBP3.46□□□□□ -1.86
NEB-220ENST00000618972 ZNF287Q9HBT7 754 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 RESTQ13127 1097 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 IQCB1Q15051 598 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 BLZF1Q9H2G9 400 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 FAM114A2Q9NRY5 505 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 MIA2Q96PC5 1412 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 CHUKO15111 745 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 PTPROQ16827 1216 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 LRRC23Q53EV4 343 aaPredicted RBP3.46□□□□□ -1.86
NEB-220ENST00000618972 LRRC8AQ8IWT6 810 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 SMYD4Q8IYR2 804 aaPredicted RBP3.46□□□□□ -1.86
NEB-220ENST00000618972 CTAGE8P0CG41 777 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 174.5 ms