RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 MAP4K1Q92918 833 aa6.43□□□□□ -1.38
CPNE4-214ENST00000617767 BRF1Q92994 677 aa6.43□□□□□ -1.38
CPNE4-214ENST00000617767 OSBP2Q969R2 916 aa6.43□□□□□ -1.38
CPNE4-214ENST00000617767 HAUS7Q99871 368 aa6.43□□□□□ -1.38
CPNE4-214ENST00000617767 CCDC87Q9NVE4 849 aa6.43□□□□□ -1.38
CPNE4-214ENST00000617767 BIN2Q9UBW5 565 aaPredicted RBP6.43□□□□□ -1.38
CPNE4-214ENST00000617767 PYCARDQ9ULZ3 195 aa6.43□□□□□ -1.38
CPNE4-214ENST00000617767 PHLPP1O60346 1717 aa6.43□□□□□ -1.38
CPNE4-214ENST00000617767 RXRAP19793 462 aa6.43□□□□□ -1.38
CPNE4-214ENST00000617767 INTS5Q6P9B9 1019 aaKnown RBP6.43□□□□□ -1.38
CPNE4-214ENST00000617767 Q6ZUG5 572 aa6.43□□□□□ -1.38
CPNE4-214ENST00000617767 SMARCE1Q969G3 411 aa6.43□□□□□ -1.38
CPNE4-214ENST00000617767 TTC14Q96N46 770 aa6.43□□□□□ -1.38
CPNE4-214ENST00000617767 PUS7LQ9H0K6 701 aaKnown RBP6.43□□□□□ -1.38
CPNE4-214ENST00000617767 KDM4CQ9H3R0 1056 aa6.43□□□□□ -1.38
CPNE4-214ENST00000617767 LMBRD1Q9NUN5 540 aa6.43□□□□□ -1.38
CPNE4-214ENST00000617767 PAXBP1Q9Y5B6 917 aa6.43□□□□□ -1.38
CPNE4-214ENST00000617767 PLEKHG2Q9H7P9 1386 aa6.43□□□□□ -1.38
CPNE4-214ENST00000617767 USP42Q9H9J4 1324 aaKnown RBP6.42□□□□□ -1.38
CPNE4-214ENST00000617767 PCCAP05165 728 aaPredicted RBP6.42□□□□□ -1.38
CPNE4-214ENST00000617767 MCAMP43121 646 aa6.42□□□□□ -1.38
CPNE4-214ENST00000617767 APOBRQ0VD83 1088 aa6.42□□□□□ -1.38
CPNE4-214ENST00000617767 FBXO38Q6PIJ6 1188 aa6.42□□□□□ -1.38
CPNE4-214ENST00000617767 STOX1Q6ZVD7 989 aa6.42□□□□□ -1.38
CPNE4-214ENST00000617767 C3orf67Q6ZVT6 689 aa6.42□□□□□ -1.38
CPNE4-214ENST00000617767 AMIGO3Q86WK7 504 aa6.42□□□□□ -1.38
CPNE4-214ENST00000617767 SUGP1Q8IWZ8 645 aaKnown RBP6.42□□□□□ -1.38
CPNE4-214ENST00000617767 KBTBD3Q8NAB2 608 aa6.42□□□□□ -1.38
CPNE4-214ENST00000617767 TEX13AQ9BXU3 409 aaPredicted RBP6.42□□□□□ -1.38
CPNE4-214ENST00000617767 TFIP11Q9UBB9 837 aaKnown RBP6.42□□□□□ -1.38
CPNE4-214ENST00000617767 BAZ2BQ9UIF8 2168 aaKnown RBP6.42□□□□□ -1.38
CPNE4-214ENST00000617767 PALLDQ8WX93 1383 aa6.42□□□□□ -1.38
CPNE4-214ENST00000617767 DOT1LQ8TEK3 1739 aa6.42□□□□□ -1.38
CPNE4-214ENST00000617767 LAMB4A4D0S4 1761 aa6.42□□□□□ -1.38
CPNE4-214ENST00000617767 ST3GAL1Q11201 340 aa6.42□□□□□ -1.38
CPNE4-214ENST00000617767 PSMD2Q13200 908 aa6.42□□□□□ -1.38
CPNE4-214ENST00000617767 RNF20Q5VTR2 975 aa6.42□□□□□ -1.38
CPNE4-214ENST00000617767 TSHZ1Q6ZSZ6 1077 aa6.42□□□□□ -1.38
CPNE4-214ENST00000617767 CCDC144CPQ8IYA2 1237 aa6.42□□□□□ -1.38
CPNE4-214ENST00000617767 ABCF2Q9UG63 623 aa6.42□□□□□ -1.38
CPNE4-214ENST00000617767 USP21Q9UK80 565 aa6.42□□□□□ -1.38
CPNE4-214ENST00000617767 MAST3O60307 1309 aa6.42□□□□□ -1.38
CPNE4-214ENST00000617767 GNPATO15228 680 aa6.42□□□□□ -1.38
CPNE4-214ENST00000617767 BCAMP50895 628 aa6.42□□□□□ -1.38
CPNE4-214ENST00000617767 PLCB2Q00722 1185 aa6.42□□□□□ -1.38
CPNE4-214ENST00000617767 DNM1Q05193 864 aaKnown RBP6.42□□□□□ -1.38
CPNE4-214ENST00000617767 SLC9C2Q5TAH2 1124 aa6.42□□□□□ -1.38
CPNE4-214ENST00000617767 MFSD4BQ5TF39 518 aa6.42□□□□□ -1.38
CPNE4-214ENST00000617767 JAKMIP3Q5VZ66 844 aa6.42□□□□□ -1.38
CPNE4-214ENST00000617767 MMS22LQ6ZRQ5 1243 aa6.42□□□□□ -1.38
CPNE4-214ENST00000617767 USP48Q86UV5 1035 aa6.42□□□□□ -1.38
CPNE4-214ENST00000617767 MIGA1Q8NAN2 632 aa6.42□□□□□ -1.38
CPNE4-214ENST00000617767 LINC00116Q8NCU8 138 aa6.42□□□□□ -1.38
CPNE4-214ENST00000617767 FAXDC2Q96IV6 333 aa6.42□□□□□ -1.38
CPNE4-214ENST00000617767 USP25Q9UHP3 1055 aa6.42□□□□□ -1.38
CPNE4-214ENST00000617767 NUP98P52948 1817 aa6.42□□□□□ -1.38
CPNE4-214ENST00000617767 ANKRD65E5RJM6 399 aa6.41□□□□□ -1.38
CPNE4-214ENST00000617767 HIP1O00291 1037 aa6.41□□□□□ -1.38
CPNE4-214ENST00000617767 STX6O43752 255 aa6.41□□□□□ -1.38
CPNE4-214ENST00000617767 ECM2O94769 699 aaPredicted RBP6.41□□□□□ -1.38
CPNE4-214ENST00000617767 HSPD1P10809 573 aaKnown RBP6.41□□□□□ -1.38
CPNE4-214ENST00000617767 LARP1BQ659C4 914 aaKnown RBP6.41□□□□□ -1.38
CPNE4-214ENST00000617767 KIAA1524Q8TCG1 905 aa6.41□□□□□ -1.38
CPNE4-214ENST00000617767 NEK1Q96PY6 1258 aa6.41□□□□□ -1.38
CPNE4-214ENST00000617767 CEP89Q96ST8 783 aa6.41□□□□□ -1.38
CPNE4-214ENST00000617767 TMEM63CQ9P1W3 806 aa6.41□□□□□ -1.38
CPNE4-214ENST00000617767 TJP1Q07157 1748 aa6.41□□□□□ -1.38
CPNE4-214ENST00000617767 COL16A1Q07092 1604 aaPredicted RBP6.41□□□□□ -1.38
CPNE4-214ENST00000617767 SPATA31A5Q5VU36 1347 aa6.41□□□□□ -1.38
CPNE4-214ENST00000617767 SPATA31A7Q8IWB4 1347 aa6.41□□□□□ -1.38
CPNE4-214ENST00000617767 UBR2Q8IWV8 1755 aa6.41□□□□□ -1.38
CPNE4-214ENST00000617767 CYP2E1P05181 493 aaPredicted RBP6.41□□□□□ -1.38
CPNE4-214ENST00000617767 MCM2P49736 904 aa6.41□□□□□ -1.38
CPNE4-214ENST00000617767 ERFEQ4G0M1 354 aa6.41□□□□□ -1.38
CPNE4-214ENST00000617767 RRP12Q5JTH9 1297 aaKnown RBP6.41□□□□□ -1.38
CPNE4-214ENST00000617767 USPL1Q5W0Q7 1092 aa6.41□□□□□ -1.38
CPNE4-214ENST00000617767 CDC37L1Q7L3B6 337 aa6.41□□□□□ -1.38
CPNE4-214ENST00000617767 CCDC112Q8NEF3 446 aa6.41□□□□□ -1.38
CPNE4-214ENST00000617767 ZSWIM6Q9HCJ5 1215 aa6.41□□□□□ -1.38
CPNE4-214ENST00000617767 ETAA1Q9NY74 926 aa6.41□□□□□ -1.38
CPNE4-214ENST00000617767 WWC3Q9ULE0 1092 aa6.41□□□□□ -1.38
CPNE4-214ENST00000617767 TNS2Q63HR2 1409 aa6.41□□□□□ -1.38
CPNE4-214ENST00000617767 NUP188Q5SRE5 1749 aa6.41□□□□□ -1.38
CPNE4-214ENST00000617767 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.41□□□□□ -1.38
CPNE4-214ENST00000617767 SMTNL1A8MU46 457 aa6.41□□□□□ -1.38
CPNE4-214ENST00000617767 RNF113AO15541 343 aaKnown RBP6.41□□□□□ -1.38
CPNE4-214ENST00000617767 BRD1O95696 1058 aa6.41□□□□□ -1.38
CPNE4-214ENST00000617767 RPS6KB1P23443 525 aa6.41□□□□□ -1.38
CPNE4-214ENST00000617767 GYG1P46976 350 aa6.41□□□□□ -1.38
CPNE4-214ENST00000617767 MNAT1P51948 309 aa6.41□□□□□ -1.38
CPNE4-214ENST00000617767 CUL4AQ13619 759 aa6.41□□□□□ -1.38
CPNE4-214ENST00000617767 TOB2Q14106 344 aaPredicted RBP6.41□□□□□ -1.38
CPNE4-214ENST00000617767 MICALL1Q8N3F8 863 aa6.41□□□□□ -1.38
CPNE4-214ENST00000617767 NKX2-3Q8TAU0 364 aa6.41□□□□□ -1.38
CPNE4-214ENST00000617767 C16orf45Q96MC5 204 aaPredicted RBP6.41□□□□□ -1.38
CPNE4-214ENST00000617767 UTP14AQ9BVJ6 771 aaKnown RBP6.41□□□□□ -1.38
CPNE4-214ENST00000617767 PIH1D3Q9NQM4 214 aaKnown RBP6.41□□□□□ -1.38
CPNE4-214ENST00000617767 PICK1Q9NRD5 415 aa6.41□□□□□ -1.38
CPNE4-214ENST00000617767 CPSF2Q9P2I0 782 aaKnown RBP6.41□□□□□ -1.38
CPNE4-214ENST00000617767 SH3TC1Q8TE82 1336 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms