RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 DPY19L2Q6NUT2 758 aa11.57□□□□□ -0.56
SMARCA1-205ENST00000617310 PAGR1Q9BTK6 254 aa11.57□□□□□ -0.56
SMARCA1-205ENST00000617310 ARHGEF10LQ9HCE6 1279 aa11.57□□□□□ -0.56
SMARCA1-205ENST00000617310 ARGLU1Q9NWB6 273 aaPredicted RBP11.57□□□□□ -0.56
SMARCA1-205ENST00000617310 BCORL1Q5H9F3 1711 aa11.57□□□□□ -0.56
SMARCA1-205ENST00000617310 DDX39AO00148 427 aaKnown RBP11.57□□□□□ -0.56
SMARCA1-205ENST00000617310 N4BP3O15049 544 aa11.57□□□□□ -0.56
SMARCA1-205ENST00000617310 PTH1RQ03431 593 aa11.57□□□□□ -0.56
SMARCA1-205ENST00000617310 TRAF1Q13077 416 aa11.57□□□□□ -0.56
SMARCA1-205ENST00000617310 HSP90B2PQ58FF3 399 aa11.57□□□□□ -0.56
SMARCA1-205ENST00000617310 PPP4R3BQ5MIZ7 849 aa11.57□□□□□ -0.56
SMARCA1-205ENST00000617310 CCDC174Q6PII3 467 aa11.57□□□□□ -0.56
SMARCA1-205ENST00000617310 PIK3AP1Q6ZUJ8 805 aa11.57□□□□□ -0.56
SMARCA1-205ENST00000617310 TMC6Q7Z403 805 aa11.57□□□□□ -0.56
SMARCA1-205ENST00000617310 KCNG4Q8TDN1 519 aa11.57□□□□□ -0.56
SMARCA1-205ENST00000617310 SMCR8Q8TEV9 937 aaPredicted RBP11.57□□□□□ -0.56
SMARCA1-205ENST00000617310 TMOD4Q9NZQ9 345 aa11.57□□□□□ -0.56
SMARCA1-205ENST00000617310 MAST3O60307 1309 aa11.57□□□□□ -0.56
SMARCA1-205ENST00000617310 HEG1Q9ULI3 1381 aa11.57□□□□□ -0.56
SMARCA1-205ENST00000617310 HARSP12081 509 aaKnown RBP11.57□□□□□ -0.56
SMARCA1-205ENST00000617310 GSPT1P15170 499 aaKnown RBP11.57□□□□□ -0.56
SMARCA1-205ENST00000617310 KRT2P35908 639 aa11.57□□□□□ -0.56
SMARCA1-205ENST00000617310 HSP90AA2PQ14568 343 aaPredicted RBP11.57□□□□□ -0.56
SMARCA1-205ENST00000617310 MPHOSPH6Q99547 160 aaKnown RBP11.57□□□□□ -0.56
SMARCA1-205ENST00000617310 KCNJ14Q9UNX9 436 aa11.57□□□□□ -0.56
SMARCA1-205ENST00000617310 KIF20AO95235 890 aa11.56□□□□□ -0.56
SMARCA1-205ENST00000617310 GOLGA8HP0CJ92 632 aa11.56□□□□□ -0.56
SMARCA1-205ENST00000617310 DIXDC1Q155Q3 683 aa11.56□□□□□ -0.56
SMARCA1-205ENST00000617310 LRRC47Q8N1G4 583 aaKnown RBP11.56□□□□□ -0.56
SMARCA1-205ENST00000617310 ZNF397Q8NF99 534 aaPredicted RBP11.56□□□□□ -0.56
SMARCA1-205ENST00000617310 A0A1B0GVL5 298 aa11.56□□□□□ -0.56
SMARCA1-205ENST00000617310 C21orf2O43822 256 aa11.56□□□□□ -0.56
SMARCA1-205ENST00000617310 ATP2B4P23634 1241 aa11.56□□□□□ -0.56
SMARCA1-205ENST00000617310 BTDP43251 543 aa11.56□□□□□ -0.56
SMARCA1-205ENST00000617310 KIFC2Q96AC6 838 aa11.56□□□□□ -0.56
SMARCA1-205ENST00000617310 CENPHQ9H3R5 247 aa11.56□□□□□ -0.56
SMARCA1-205ENST00000617310 IVNS1ABPQ9Y6Y0 642 aa11.56□□□□□ -0.56
SMARCA1-205ENST00000617310 ARHGAP31Q2M1Z3 1444 aa11.56□□□□□ -0.56
SMARCA1-205ENST00000617310 CTAGE5O15320 804 aa11.56□□□□□ -0.56
SMARCA1-205ENST00000617310 MAEAQ7L5Y9 396 aa11.56□□□□□ -0.56
SMARCA1-205ENST00000617310 DIS3L2Q8IYB7 885 aaKnown RBP11.56□□□□□ -0.56
SMARCA1-205ENST00000617310 GJD4Q96KN9 370 aaPredicted RBP11.56□□□□□ -0.56
SMARCA1-205ENST00000617310 PPEF1O14829 653 aaPredicted RBP11.55□□□□□ -0.56
SMARCA1-205ENST00000617310 ZMYM4Q5VZL5 1548 aa11.55□□□□□ -0.56
SMARCA1-205ENST00000617310 ERCC3P19447 782 aa11.55□□□□□ -0.56
SMARCA1-205ENST00000617310 SPA17Q15506 151 aa11.55□□□□□ -0.56
SMARCA1-205ENST00000617310 SPICE1Q8N0Z3 855 aa11.55□□□□□ -0.56
SMARCA1-205ENST00000617310 CCDC112Q8NEF3 446 aa11.55□□□□□ -0.56
SMARCA1-205ENST00000617310 DNAJC25Q9H1X3 360 aa11.55□□□□□ -0.56
SMARCA1-205ENST00000617310 SH2D4AQ9H788 454 aa11.55□□□□□ -0.56
SMARCA1-205ENST00000617310 COPRSQ9NQ92 184 aa11.55□□□□□ -0.56
SMARCA1-205ENST00000617310 PPRC1Q5VV67 1664 aaKnown RBP11.55□□□□□ -0.56
SMARCA1-205ENST00000617310 MRPL12P52815 198 aaKnown RBP11.55□□□□□ -0.56
SMARCA1-205ENST00000617310 RAD51AP2Q09MP3 1159 aa11.55□□□□□ -0.56
SMARCA1-205ENST00000617310 PALD1Q9ULE6 856 aa11.55□□□□□ -0.56
SMARCA1-205ENST00000617310 KDM5CP41229 1560 aa11.55□□□□□ -0.56
SMARCA1-205ENST00000617310 E7EWF7 191 aa11.55□□□□□ -0.56
SMARCA1-205ENST00000617310 NEBLO76041 1014 aa11.55□□□□□ -0.56
SMARCA1-205ENST00000617310 DTHD1Q6ZMT9 781 aa11.55□□□□□ -0.56
SMARCA1-205ENST00000617310 VPS54Q9P1Q0 977 aa11.55□□□□□ -0.56
SMARCA1-205ENST00000617310 KDM5AP29375 1690 aaKnown RBP11.54□□□□□ -0.56
SMARCA1-205ENST00000617310 RDXP35241 583 aaKnown RBP11.54□□□□□ -0.56
SMARCA1-205ENST00000617310 TXKP42681 527 aa11.54□□□□□ -0.56
SMARCA1-205ENST00000617310 TNNT3P45378 269 aaPredicted RBP11.54□□□□□ -0.56
SMARCA1-205ENST00000617310 PPARAQ07869 468 aa11.54□□□□□ -0.56
SMARCA1-205ENST00000617310 STX1AQ16623 288 aa11.54□□□□□ -0.56
SMARCA1-205ENST00000617310 DPH6Q7L8W6 267 aa11.54□□□□□ -0.56
SMARCA1-205ENST00000617310 MAPK8IP1Q9UQF2 711 aa11.54□□□□□ -0.56
SMARCA1-205ENST00000617310 BLMP54132 1417 aaPredicted RBP11.54□□□□□ -0.56
SMARCA1-205ENST00000617310 SORBS3O60504 671 aa11.54□□□□□ -0.56
SMARCA1-205ENST00000617310 FGAP02671 866 aa11.54□□□□□ -0.56
SMARCA1-205ENST00000617310 ADD1P35611 737 aaKnown RBP11.54□□□□□ -0.56
SMARCA1-205ENST00000617310 DYNLL1P63167 89 aaKnown RBP11.54□□□□□ -0.56
SMARCA1-205ENST00000617310 IRX3P78415 501 aaPredicted RBP11.54□□□□□ -0.56
SMARCA1-205ENST00000617310 ARID5AQ03989 594 aa11.54□□□□□ -0.56
SMARCA1-205ENST00000617310 CETN1Q12798 172 aa11.54□□□□□ -0.56
SMARCA1-205ENST00000617310 EPHA10Q5JZY3 1008 aa11.54□□□□□ -0.56
SMARCA1-205ENST00000617310 SULF1Q8IWU6 871 aa11.54□□□□□ -0.56
SMARCA1-205ENST00000617310 TMEM87BQ96K49 555 aa11.54□□□□□ -0.56
SMARCA1-205ENST00000617310 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.54□□□□□ -0.561e-18■■■□□ 18
SMARCA1-205ENST00000617310 RBM6P78332 1123 aaKnown RBP11.54□□□□□ -0.56
SMARCA1-205ENST00000617310 IFNL3Q8IZI9 196 aa11.54□□□□□ -0.56
SMARCA1-205ENST00000617310 STAMQ92783 540 aa11.54□□□□□ -0.56
SMARCA1-205ENST00000617310 ESPNB1AK53 854 aa11.53□□□□□ -0.56
SMARCA1-205ENST00000617310 FGFR1OPO95684 399 aaKnown RBP11.53□□□□□ -0.56
SMARCA1-205ENST00000617310 NEFHP12036 1026 aa11.53□□□□□ -0.56
SMARCA1-205ENST00000617310 CACNB3P54284 484 aa11.53□□□□□ -0.56
SMARCA1-205ENST00000617310 RBM10P98175 930 aaKnown RBP11.53□□□□□ -0.56
SMARCA1-205ENST00000617310 TAF3Q5VWG9 929 aa11.53□□□□□ -0.56
SMARCA1-205ENST00000617310 SPAG5Q96R06 1193 aa11.53□□□□□ -0.56
SMARCA1-205ENST00000617310 FRMPD2Q68DX3 1309 aaPredicted RBP11.53□□□□□ -0.56
SMARCA1-205ENST00000617310 PHACTR2O75167 634 aa11.53□□□□□ -0.56
SMARCA1-205ENST00000617310 POTEJP0CG39 1038 aa11.53□□□□□ -0.56
SMARCA1-205ENST00000617310 HSPD1P10809 573 aaKnown RBP11.53□□□□□ -0.56
SMARCA1-205ENST00000617310 TXNRD1Q16881 649 aa11.53□□□□□ -0.56
SMARCA1-205ENST00000617310 ANO6Q4KMQ2 910 aa11.53□□□□□ -0.56
SMARCA1-205ENST00000617310 TAF4BQ92750 862 aa11.53□□□□□ -0.56
SMARCA1-205ENST00000617310 CSADQ9Y600 493 aa11.53□□□□□ -0.56
SMARCA1-205ENST00000617310 XDHP47989 1333 aa11.53□□□□□ -0.56
SMARCA1-205ENST00000617310 CCP110O43303 1012 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms