RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 CCDC39Q9UFE4 941 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 MON2Q7Z3U7 1717 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 SFI1A8K8P3 1242 aa3.84□□□□□ -1.79
LPP-220ENST00000617246 PRIM1P49642 420 aaKnown RBP3.84□□□□□ -1.79
LPP-220ENST00000617246 NLRP5P59047 1200 aa3.84□□□□□ -1.79
LPP-220ENST00000617246 CENPQQ7L2Z9 268 aaPredicted RBP3.84□□□□□ -1.79
LPP-220ENST00000617246 SDF4Q9BRK5 362 aa3.84□□□□□ -1.79
LPP-220ENST00000617246 IL1RAPL2Q9NP60 686 aa3.84□□□□□ -1.79
LPP-220ENST00000617246 PHLPP2Q6ZVD8 1323 aa3.84□□□□□ -1.79
LPP-220ENST00000617246 NOGQ13253 232 aa3.84□□□□□ -1.79
LPP-220ENST00000617246 TTC30AQ86WT1 665 aa3.84□□□□□ -1.79
LPP-220ENST00000617246 FMNL3Q8IVF7 1028 aa3.84□□□□□ -1.79
LPP-220ENST00000617246 MANSC4A6NHS7 340 aaPredicted RBP3.84□□□□□ -1.79
LPP-220ENST00000617246 NPR1P16066 1061 aa3.84□□□□□ -1.79
LPP-220ENST00000617246 SDE2Q6IQ49 451 aa3.84□□□□□ -1.79
LPP-220ENST00000617246 NCAPG2Q86XI2 1143 aa3.84□□□□□ -1.79
LPP-220ENST00000617246 DCAF5Q96JK2 942 aa3.84□□□□□ -1.79
LPP-220ENST00000617246 NCAM2O15394 837 aa3.84□□□□□ -1.79
LPP-220ENST00000617246 IMMTQ16891 758 aaKnown RBP3.84□□□□□ -1.79
LPP-220ENST00000617246 SULT6B1Q6IMI4 303 aa3.84□□□□□ -1.79
LPP-220ENST00000617246 LRRC46Q96FV0 321 aa3.84□□□□□ -1.79
LPP-220ENST00000617246 DBF4Q9UBU7 674 aaPredicted RBP3.84□□□□□ -1.79
LPP-220ENST00000617246 LOC105371045A0A1W2PR82 267 aa3.84□□□□□ -1.79
LPP-220ENST00000617246 PHAXQ9H814 394 aaKnown RBP3.84□□□□□ -1.79
LPP-220ENST00000617246 MST1RQ04912 1400 aa3.84□□□□□ -1.79
LPP-220ENST00000617246 ZNF536O15090 1300 aa3.84□□□□□ -1.79
LPP-220ENST00000617246 PALLDQ8WX93 1383 aa3.84□□□□□ -1.79
LPP-220ENST00000617246 SMARCE1Q969G3 411 aa3.84□□□□□ -1.79
LPP-220ENST00000617246 ALS2CR12Q96Q35 445 aa3.84□□□□□ -1.79
LPP-220ENST00000617246 TSEN34Q9BSV6 310 aaKnown RBP3.84□□□□□ -1.79
LPP-220ENST00000617246 KIAA1551Q9HCM1 1747 aa3.84□□□□□ -1.79
LPP-220ENST00000617246 HEMK1Q9Y5R4 338 aaPredicted RBP3.84□□□□□ -1.79
LPP-220ENST00000617246 GOLGA6L19H0YKK7 550 aa3.84□□□□□ -1.79
LPP-220ENST00000617246 C6orf163Q5TEZ5 329 aa3.84□□□□□ -1.79
LPP-220ENST00000617246 KIAA1841Q6NSI8 718 aa3.84□□□□□ -1.79
LPP-220ENST00000617246 FAM160B1Q5W0V3 765 aa3.84□□□□□ -1.79
LPP-220ENST00000617246 JARID2Q92833 1246 aaPredicted RBP3.84□□□□□ -1.79
LPP-220ENST00000617246 ABCC11Q96J66 1382 aa3.84□□□□□ -1.79
LPP-220ENST00000617246 WDR66Q8TBY9 1149 aa3.84□□□□□ -1.79
LPP-220ENST00000617246 BICD2Q8TD16 824 aa3.84□□□□□ -1.79
LPP-220ENST00000617246 POP1Q99575 1024 aaKnown RBP3.84□□□□□ -1.79
LPP-220ENST00000617246 ZBTB7AO95365 584 aa3.84□□□□□ -1.79
LPP-220ENST00000617246 CARD10Q9BWT7 1032 aa3.84□□□□□ -1.79
LPP-220ENST00000617246 ZNF341Q9BYN7 854 aa3.84□□□□□ -1.79
LPP-220ENST00000617246 DOCK2Q92608 1830 aa3.84□□□□□ -1.8
LPP-220ENST00000617246 F8W031 263 aaPredicted RBP3.84□□□□□ -1.8
LPP-220ENST00000617246 FAM8A1Q9UBU6 413 aa3.84□□□□□ -1.8
LPP-220ENST00000617246 TSC1Q92574 1164 aa3.84□□□□□ -1.8
LPP-220ENST00000617246 IPPQ9Y573 584 aa3.84□□□□□ -1.8
LPP-220ENST00000617246 STX6O43752 255 aa3.84□□□□□ -1.8
LPP-220ENST00000617246 ERLIN2O94905 339 aa3.84□□□□□ -1.8
LPP-220ENST00000617246 OATP04181 439 aa3.84□□□□□ -1.8
LPP-220ENST00000617246 ZKSCAN2Q63HK3 967 aa3.84□□□□□ -1.8
LPP-220ENST00000617246 EFHBQ8N7U6 833 aa3.84□□□□□ -1.8
LPP-220ENST00000617246 SLC4A7Q9Y6M7 1214 aa3.84□□□□□ -1.8
LPP-220ENST00000617246 FSTL1Q12841 308 aa3.84□□□□□ -1.8
LPP-220ENST00000617246 UBR2Q8IWV8 1755 aa3.84□□□□□ -1.8
LPP-220ENST00000617246 KIF24Q5T7B8 1368 aa3.84□□□□□ -1.8
LPP-220ENST00000617246 ZC3H4Q9UPT8 1303 aaKnown RBP3.84□□□□□ -1.8
LPP-220ENST00000617246 NEK4P51957 841 aa3.84□□□□□ -1.8
LPP-220ENST00000617246 BBS5Q8N3I7 341 aa3.84□□□□□ -1.8
LPP-220ENST00000617246 TSHZ2Q9NRE2 1034 aa3.84□□□□□ -1.8
LPP-220ENST00000617246 EDARQ9UNE0 448 aa3.84□□□□□ -1.8
LPP-220ENST00000617246 RIC1Q4ADV7 1423 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 PUF60Q9UHX1 559 aaKnown RBP3.83□□□□□ -1.8
LPP-220ENST00000617246 ANKRD35Q8N283 1001 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 SREK1Q8WXA9 508 aaKnown RBP3.83□□□□□ -1.8
LPP-220ENST00000617246 C6orf50Q9HD87 102 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 ANGEL1Q9UNK9 670 aaKnown RBP3.83□□□□□ -1.8
LPP-220ENST00000617246 A0A1W2PP64 1363 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 ACTN2P35609 894 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 FKBP4Q02790 459 aaKnown RBP eCLIP3.83□□□□□ -1.8
LPP-220ENST00000617246 PDE4DQ08499 809 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 OLFM4Q6UX06 510 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 RWDD3Q9Y3V2 267 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 IARSP41252 1262 aaKnown RBP3.83□□□□□ -1.8
LPP-220ENST00000617246 NAA16Q6N069 864 aaPredicted RBP3.83□□□□□ -1.8
LPP-220ENST00000617246 PYM1Q9BRP8 204 aaKnown RBP3.83□□□□□ -1.8
LPP-220ENST00000617246 SOS1Q07889 1333 aaPredicted RBP3.83□□□□□ -1.8
LPP-220ENST00000617246 RPUSD2Q8IZ73 545 aaKnown RBP3.83□□□□□ -1.8
LPP-220ENST00000617246 N4BP2L2Q92802 583 aaPredicted RBP3.83□□□□□ -1.8
LPP-220ENST00000617246 SRGAP3O43295 1099 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 KDM1AO60341 852 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 FGFR1OPO95684 399 aaKnown RBP3.83□□□□□ -1.8
LPP-220ENST00000617246 ANXA13P27216 316 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 HERC4Q5GLZ8 1057 aaPredicted RBP3.83□□□□□ -1.8
LPP-220ENST00000617246 LGR6Q9HBX8 967 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 EHD2Q9NZN4 543 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 HUNKP57058 714 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 PRKCQQ04759 706 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 IL17RAQ96F46 866 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 PPP2R3BQ9Y5P8 575 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 PKD1L3Q7Z443 1732 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 CRYBG1Q9Y4K1 1723 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 NPY2RP49146 381 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 ELOAQ14241 798 aaKnown RBP3.83□□□□□ -1.8
LPP-220ENST00000617246 MCTP1Q6DN14 999 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 RUFY1Q96T51 708 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 MLXIPQ9HAP2 919 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 BTAF1O14981 1849 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms