RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 RANBP6O60518 1105 aaKnown RBP4.04□□□□□ -1.76
LIG4-205ENST00000614526 TMEM67Q5HYA8 995 aa4.04□□□□□ -1.76
LIG4-205ENST00000614526 MFSD6Q6ZSS7 791 aa4.04□□□□□ -1.76
LIG4-205ENST00000614526 PIAS4Q8N2W9 510 aaPredicted RBP4.04□□□□□ -1.76
LIG4-205ENST00000614526 NSUN7Q8NE18 718 aaKnown RBP4.04□□□□□ -1.76
LIG4-205ENST00000614526 NUP133Q8WUM0 1156 aa4.04□□□□□ -1.76
LIG4-205ENST00000614526 PIBF1Q8WXW3 757 aa4.04□□□□□ -1.76
LIG4-205ENST00000614526 NACAP1Q9BZK3 213 aa4.04□□□□□ -1.76
LIG4-205ENST00000614526 ANO8Q9HCE9 1232 aaPredicted RBP4.04□□□□□ -1.76
LIG4-205ENST00000614526 TMEM63CQ9P1W3 806 aa4.04□□□□□ -1.76
LIG4-205ENST00000614526 POLLQ9UGP5 575 aa4.04□□□□□ -1.76
LIG4-205ENST00000614526 SPEF2Q9C093 1822 aa4.04□□□□□ -1.76
LIG4-205ENST00000614526 hCG_1642624A0A1W2PR95 340 aa4.04□□□□□ -1.76
LIG4-205ENST00000614526 PFKFB2O60825 505 aa4.04□□□□□ -1.76
LIG4-205ENST00000614526 POLR3DP05423 398 aaPredicted RBP4.04□□□□□ -1.76
LIG4-205ENST00000614526 XRCC6P12956 609 aaKnown RBP eCLIP4.04□□□□□ -1.76
LIG4-205ENST00000614526 CHRNA5P30532 468 aa4.04□□□□□ -1.76
LIG4-205ENST00000614526 KLHL40Q2TBA0 621 aa4.04□□□□□ -1.76
LIG4-205ENST00000614526 SKOR2Q2VWA4 1001 aaPredicted RBP4.04□□□□□ -1.76
LIG4-205ENST00000614526 FAM47AQ5JRC9 791 aa4.04□□□□□ -1.76
LIG4-205ENST00000614526 RNF214Q8ND24 703 aa4.04□□□□□ -1.76
LIG4-205ENST00000614526 NSUN4Q96CB9 384 aaKnown RBP4.04□□□□□ -1.76
LIG4-205ENST00000614526 RBM17Q96I25 401 aaKnown RBP4.04□□□□□ -1.76
LIG4-205ENST00000614526 DDX60Q8IY21 1712 aaKnown RBP4.04□□□□□ -1.76
LIG4-205ENST00000614526 AKAP11Q9UKA4 1901 aa4.04□□□□□ -1.76
LIG4-205ENST00000614526 NMT2O60551 498 aa4.04□□□□□ -1.76
LIG4-205ENST00000614526 USP17L8P0C7I0 530 aa4.04□□□□□ -1.76
LIG4-205ENST00000614526 GTF2IP78347 998 aa4.04□□□□□ -1.76
LIG4-205ENST00000614526 ZSCAN23Q3MJ62 389 aa4.04□□□□□ -1.76
LIG4-205ENST00000614526 AKNAD1Q5T1N1 836 aa4.04□□□□□ -1.76
LIG4-205ENST00000614526 IL27Q8NEV9 243 aa4.04□□□□□ -1.76
LIG4-205ENST00000614526 SAP30BPQ9UHR5 308 aaKnown RBP4.04□□□□□ -1.76
LIG4-205ENST00000614526 GGA1Q9UJY5 639 aa4.04□□□□□ -1.76
LIG4-205ENST00000614526 PARP3Q9Y6F1 533 aa4.04□□□□□ -1.76
LIG4-205ENST00000614526 C4BP0C0L5 1744 aa4.04□□□□□ -1.76
LIG4-205ENST00000614526 COL5A3P25940 1745 aaPredicted RBP4.04□□□□□ -1.76
LIG4-205ENST00000614526 XDHP47989 1333 aa4.04□□□□□ -1.76
LIG4-205ENST00000614526 G3V3G9 751 aa4.03□□□□□ -1.76
LIG4-205ENST00000614526 LDHBP07195 334 aaKnown RBP4.03□□□□□ -1.76
LIG4-205ENST00000614526 CDC27P30260 824 aa4.03□□□□□ -1.76
LIG4-205ENST00000614526 PPARAQ07869 468 aa4.03□□□□□ -1.76
LIG4-205ENST00000614526 DCAF8Q5TAQ9 597 aa4.03□□□□□ -1.76
LIG4-205ENST00000614526 CLEC17AQ6ZS10 378 aa4.03□□□□□ -1.76
LIG4-205ENST00000614526 NLGN1Q8N2Q7 840 aa4.03□□□□□ -1.76
LIG4-205ENST00000614526 RIOK1Q9BRS2 568 aaKnown RBP4.03□□□□□ -1.76
LIG4-205ENST00000614526 KCNQ5Q9NR82 932 aa4.03□□□□□ -1.76
LIG4-205ENST00000614526 MCM9Q9NXL9 1143 aa4.03□□□□□ -1.76
LIG4-205ENST00000614526 ORC3Q9UBD5 711 aaPredicted RBP4.03□□□□□ -1.76
LIG4-205ENST00000614526 HPS5Q9UPZ3 1129 aa4.03□□□□□ -1.76
LIG4-205ENST00000614526 PLSCR1O15162 318 aa4.03□□□□□ -1.76
LIG4-205ENST00000614526 FDPSP14324 419 aaKnown RBP4.03□□□□□ -1.76
LIG4-205ENST00000614526 USP5P45974 858 aa4.03□□□□□ -1.76
LIG4-205ENST00000614526 METAP2P50579 478 aaKnown RBP eCLIP4.03□□□□□ -1.76
LIG4-205ENST00000614526 CAMK4Q16566 473 aa4.03□□□□□ -1.76
LIG4-205ENST00000614526 TTC6Q86TZ1 520 aa4.03□□□□□ -1.76
LIG4-205ENST00000614526 MAPKAPK5Q8IW41 473 aa4.03□□□□□ -1.76
LIG4-205ENST00000614526 TBC1D16Q8TBP0 767 aa4.03□□□□□ -1.76
LIG4-205ENST00000614526 TGFBRAP1Q8WUH2 860 aa4.03□□□□□ -1.76
LIG4-205ENST00000614526 AKT1S1Q96B36 256 aa4.03□□□□□ -1.76
LIG4-205ENST00000614526 DYNLL2Q96FJ2 89 aa4.03□□□□□ -1.76
LIG4-205ENST00000614526 CD209Q9NNX6 404 aa4.03□□□□□ -1.76
LIG4-205ENST00000614526 PPP1R1BQ9UD71 204 aaPredicted RBP4.03□□□□□ -1.76
LIG4-205ENST00000614526 ANGEL1Q9UNK9 670 aaKnown RBP4.03□□□□□ -1.76
LIG4-205ENST00000614526 NHSQ6T4R5 1651 aa4.03□□□□□ -1.76
LIG4-205ENST00000614526 CCDC69A6NI79 296 aa4.03□□□□□ -1.76
LIG4-205ENST00000614526 PPEF1O14829 653 aaPredicted RBP4.03□□□□□ -1.76
LIG4-205ENST00000614526 SLURP2P0DP57 97 aa4.03□□□□□ -1.76
LIG4-205ENST00000614526 PDCP20941 246 aa4.03□□□□□ -1.76
LIG4-205ENST00000614526 SCNN1DP51172 638 aa4.03□□□□□ -1.76
LIG4-205ENST00000614526 MFSD14BQ5SR56 506 aa4.03□□□□□ -1.76
LIG4-205ENST00000614526 CTR9Q6PD62 1173 aa4.03□□□□□ -1.76
LIG4-205ENST00000614526 BRWD3Q6RI45 1802 aa4.03□□□□□ -1.76
LIG4-205ENST00000614526 PNPLA7Q6ZV29 1317 aa4.03□□□□□ -1.76
LIG4-205ENST00000614526 ZNF804AQ7Z570 1209 aa4.03□□□□□ -1.76
LIG4-205ENST00000614526 SLC44A5Q8NCS7 719 aa4.03□□□□□ -1.76
LIG4-205ENST00000614526 IGDCC4Q8TDY8 1250 aa4.03□□□□□ -1.76
LIG4-205ENST00000614526 SH3RF3Q8TEJ3 882 aaPredicted RBP4.03□□□□□ -1.76
LIG4-205ENST00000614526 ZNF274Q96GC6 653 aaPredicted RBP4.03□□□□□ -1.76
LIG4-205ENST00000614526 ALDH8A1Q9H2A2 487 aaPredicted RBP4.03□□□□□ -1.76
LIG4-205ENST00000614526 DBNDD1Q9H9R9 158 aa4.03□□□□□ -1.76
LIG4-205ENST00000614526 GRPEL1Q9HAV7 217 aa4.03□□□□□ -1.76
LIG4-205ENST00000614526 LEMD3Q9Y2U8 911 aa4.03□□□□□ -1.76
LIG4-205ENST00000614526 SLC12A7Q9Y666 1083 aa4.03□□□□□ -1.76
LIG4-205ENST00000614526 GOLGA6L4A6NEF3 574 aa4.02□□□□□ -1.77
LIG4-205ENST00000614526 GOLGA8AA7E2F4 631 aa4.02□□□□□ -1.77
LIG4-205ENST00000614526 SH2B2O14492 632 aaPredicted RBP4.02□□□□□ -1.77
LIG4-205ENST00000614526 ZBTB43O43298 467 aa4.02□□□□□ -1.77
LIG4-205ENST00000614526 ATP2B1P20020 1258 aa4.02□□□□□ -1.77
LIG4-205ENST00000614526 PICALMQ13492 652 aa4.02□□□□□ -1.77
LIG4-205ENST00000614526 CRY2Q49AN0 593 aa4.02□□□□□ -1.77
LIG4-205ENST00000614526 APOA5Q6Q788 366 aa4.02□□□□□ -1.77
LIG4-205ENST00000614526 KLHL34Q8N239 644 aa4.02□□□□□ -1.77
LIG4-205ENST00000614526 SPATA32Q96LK8 384 aa4.02□□□□□ -1.77
LIG4-205ENST00000614526 UBAC1Q9BSL1 405 aa4.02□□□□□ -1.77
LIG4-205ENST00000614526 SLC26A6Q9BXS9 759 aa4.02□□□□□ -1.77
LIG4-205ENST00000614526 AGXT2Q9BYV1 514 aa4.02□□□□□ -1.77
LIG4-205ENST00000614526 ZC3H12CQ9C0D7 883 aaKnown RBP4.02□□□□□ -1.77
LIG4-205ENST00000614526 LY9Q9HBG7 655 aa4.02□□□□□ -1.77
LIG4-205ENST00000614526 DCP1AQ9NPI6 582 aaPredicted RBP4.02□□□□□ -1.77
LIG4-205ENST00000614526 ATP6V1DQ9Y5K8 247 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms