RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 DOK7Q18PE1 504 aa11.69□□□□□ -0.54
GGA3-221ENST00000614198 UVSSAQ2YD98 709 aa11.69□□□□□ -0.54
GGA3-221ENST00000614198 CAVIN4Q5BKX8 364 aa11.69□□□□□ -0.54
GGA3-221ENST00000614198 STK32BQ9NY57 414 aa11.69□□□□□ -0.54
GGA3-221ENST00000614198 PPP1R1BQ9UD71 204 aaPredicted RBP11.69□□□□□ -0.54
GGA3-221ENST00000614198 TACC3Q9Y6A5 838 aa11.69□□□□□ -0.54
GGA3-221ENST00000614198 MYH13Q9UKX3 1938 aa11.69□□□□□ -0.54
GGA3-221ENST00000614198 CYP2D7A0A087X1C5 515 aa11.69□□□□□ -0.54
GGA3-221ENST00000614198 PSDA5PKW4 1024 aaPredicted RBP11.69□□□□□ -0.54
GGA3-221ENST00000614198 UBE4AQ14139 1066 aa11.69□□□□□ -0.54
GGA3-221ENST00000614198 TTC14Q96N46 770 aa11.69□□□□□ -0.54
GGA3-221ENST00000614198 U2AF2P26368 475 aaKnown RBP eCLIP11.68□□□□□ -0.543e-23■■■■□ 23.8
GGA3-221ENST00000614198 DIXDC1Q155Q3 683 aa11.68□□□□□ -0.54
GGA3-221ENST00000614198 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.68□□□□□ -0.54
GGA3-221ENST00000614198 NBPF3Q9H094 633 aa11.68□□□□□ -0.54
GGA3-221ENST00000614198 OGFRQ9NZT2 677 aa11.68□□□□□ -0.54
GGA3-221ENST00000614198 UQCRFS1P1P0C7P4 283 aa11.68□□□□□ -0.54
GGA3-221ENST00000614198 ZNF771Q7L3S4 317 aaPredicted RBP11.68□□□□□ -0.54
GGA3-221ENST00000614198 FBXO33Q7Z6M2 555 aa11.68□□□□□ -0.54
GGA3-221ENST00000614198 APPBP2Q92624 585 aa11.68□□□□□ -0.54
GGA3-221ENST00000614198 FBXW7Q969H0 707 aa11.68□□□□□ -0.54
GGA3-221ENST00000614198 HELLSQ9NRZ9 838 aa11.68□□□□□ -0.54
GGA3-221ENST00000614198 IRS2Q9Y4H2 1338 aa11.68□□□□□ -0.54
GGA3-221ENST00000614198 MYH7P12883 1935 aa11.68□□□□□ -0.54
GGA3-221ENST00000614198 GABPB1Q06547 395 aaPredicted RBP11.67□□□□□ -0.54
GGA3-221ENST00000614198 ST3GAL1Q11201 340 aa11.67□□□□□ -0.54
GGA3-221ENST00000614198 FAM184AQ8NB25 1140 aa11.67□□□□□ -0.54
GGA3-221ENST00000614198 RBM17Q96I25 401 aaKnown RBP11.67□□□□□ -0.54
GGA3-221ENST00000614198 EPB41L4AQ9HCS5 686 aaPredicted RBP11.67□□□□□ -0.54
GGA3-221ENST00000614198 PDRG1Q9NUG6 133 aa11.67□□□□□ -0.54
GGA3-221ENST00000614198 TPCN1Q9ULQ1 816 aa11.67□□□□□ -0.54
GGA3-221ENST00000614198 COL11A2P13942 1736 aaPredicted RBP11.67□□□□□ -0.54
GGA3-221ENST00000614198 ARAP2Q8WZ64 1704 aa11.67□□□□□ -0.54
GGA3-221ENST00000614198 CYP7A1P22680 504 aa11.67□□□□□ -0.54
GGA3-221ENST00000614198 CTDSPL2Q05D32 466 aa11.67□□□□□ -0.54
GGA3-221ENST00000614198 TTC12Q9H892 705 aaPredicted RBP11.67□□□□□ -0.54
GGA3-221ENST00000614198 F8W031 263 aaPredicted RBP11.67□□□□□ -0.54
GGA3-221ENST00000614198 PPEF1O14829 653 aaPredicted RBP11.67□□□□□ -0.54
GGA3-221ENST00000614198 CTIFO43310 598 aaKnown RBP11.67□□□□□ -0.54
GGA3-221ENST00000614198 ZKSCAN1P17029 563 aaPredicted RBP11.67□□□□□ -0.54
GGA3-221ENST00000614198 BAG6P46379 1132 aa11.67□□□□□ -0.54
GGA3-221ENST00000614198 C2CD5Q86YS7 1000 aa11.67□□□□□ -0.54
GGA3-221ENST00000614198 SYAP1Q96A49 352 aaPredicted RBP11.67□□□□□ -0.54
GGA3-221ENST00000614198 CHMP4CQ96CF2 233 aa11.67□□□□□ -0.54
GGA3-221ENST00000614198 BRIP1Q9BX63 1249 aa11.67□□□□□ -0.54
GGA3-221ENST00000614198 USP25Q9UHP3 1055 aa11.67□□□□□ -0.54
GGA3-221ENST00000614198 ME3Q16798 604 aa11.66□□□□□ -0.54
GGA3-221ENST00000614198 CCDC83Q8IWF9 413 aa11.66□□□□□ -0.54
GGA3-221ENST00000614198 TBC1D16Q8TBP0 767 aa11.66□□□□□ -0.54
GGA3-221ENST00000614198 AIDAQ96BJ3 306 aa11.66□□□□□ -0.54
GGA3-221ENST00000614198 AATFQ9NY61 560 aaKnown RBP eCLIP11.66□□□□□ -0.54
GGA3-221ENST00000614198 CHD4Q14839 1912 aa11.66□□□□□ -0.54
GGA3-221ENST00000614198 MECOMQ03112 1051 aa11.66□□□□□ -0.54
GGA3-221ENST00000614198 ZBTB9Q96C00 473 aa11.66□□□□□ -0.54
GGA3-221ENST00000614198 ZNF512BQ96KM6 892 aaPredicted RBP11.66□□□□□ -0.54
GGA3-221ENST00000614198 STRBPQ96SI9 672 aaKnown RBP11.66□□□□□ -0.54
GGA3-221ENST00000614198 ZSWIM6Q9HCJ5 1215 aa11.66□□□□□ -0.54
GGA3-221ENST00000614198 E7EWF7 191 aa11.66□□□□□ -0.54
GGA3-221ENST00000614198 KDM4AO75164 1064 aa11.66□□□□□ -0.54
GGA3-221ENST00000614198 ANAPC15P60006 121 aa11.66□□□□□ -0.54
GGA3-221ENST00000614198 TOB2Q14106 344 aaPredicted RBP11.66□□□□□ -0.54
GGA3-221ENST00000614198 R3HDM1Q15032 1099 aaKnown RBP11.66□□□□□ -0.54
GGA3-221ENST00000614198 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.66□□□□□ -0.548e-10■■□□□ 13.7
GGA3-221ENST00000614198 SENP2Q9HC62 589 aa11.66□□□□□ -0.54
GGA3-221ENST00000614198 MAP3K12Q12852 859 aa11.65□□□□□ -0.54
GGA3-221ENST00000614198 TBC1D10CQ8IV04 446 aa11.65□□□□□ -0.54
GGA3-221ENST00000614198 CYP46A1Q9Y6A2 500 aa11.65□□□□□ -0.54
GGA3-221ENST00000614198 XDHP47989 1333 aa11.65□□□□□ -0.54
GGA3-221ENST00000614198 RIOK3O14730 519 aaKnown RBP11.65□□□□□ -0.54
GGA3-221ENST00000614198 RGL2O15211 777 aa11.65□□□□□ -0.54
GGA3-221ENST00000614198 DBNDD1Q9H9R9 158 aa11.65□□□□□ -0.54
GGA3-221ENST00000614198 LAMA4Q16363 1823 aa11.65□□□□□ -0.55
GGA3-221ENST00000614198 SLX4Q8IY92 1834 aa11.65□□□□□ -0.55
GGA3-221ENST00000614198 Q6ZUG5 572 aa11.64□□□□□ -0.55
GGA3-221ENST00000614198 ANKRD2Q9GZV1 360 aa11.64□□□□□ -0.55
GGA3-221ENST00000614198 PCDHAC2Q9Y5I4 1007 aa11.64□□□□□ -0.55
GGA3-221ENST00000614198 KLRG2A4D1S0 409 aaPredicted RBP11.64□□□□□ -0.55
GGA3-221ENST00000614198 FOSBP53539 338 aa11.64□□□□□ -0.55
GGA3-221ENST00000614198 TTF1Q15361 905 aaPredicted RBP11.64□□□□□ -0.55
GGA3-221ENST00000614198 BLOC1S2Q6QNY1 142 aa11.64□□□□□ -0.55
GGA3-221ENST00000614198 KCNB2Q92953 911 aa11.64□□□□□ -0.55
GGA3-221ENST00000614198 NEK1Q96PY6 1258 aa11.64□□□□□ -0.55
GGA3-221ENST00000614198 ZKSCAN3Q9BRR0 538 aa11.64□□□□□ -0.55
GGA3-221ENST00000614198 GGA1Q9UJY5 639 aa11.64□□□□□ -0.55
GGA3-221ENST00000614198 SLC4A4Q9Y6R1 1079 aa11.64□□□□□ -0.55
GGA3-221ENST00000614198 RPAP1Q9BWH6 1393 aaPredicted RBP11.64□□□□□ -0.55
GGA3-221ENST00000614198 GSG1L2A8MUP6 293 aa11.64□□□□□ -0.55
GGA3-221ENST00000614198 C21orf2O43822 256 aa11.64□□□□□ -0.55
GGA3-221ENST00000614198 SLURP2P0DP57 97 aa11.64□□□□□ -0.55
GGA3-221ENST00000614198 HOXA10P31260 410 aaPredicted RBP11.64□□□□□ -0.55
GGA3-221ENST00000614198 SPC24Q8NBT2 197 aa11.64□□□□□ -0.55
GGA3-221ENST00000614198 BRF1Q92994 677 aa11.64□□□□□ -0.55
GGA3-221ENST00000614198 BAZ2AQ9UIF9 1905 aaKnown RBP11.64□□□□□ -0.55
GGA3-221ENST00000614198 RXRAP19793 462 aa11.63□□□□□ -0.55
GGA3-221ENST00000614198 RPS6KB1P23443 525 aa11.63□□□□□ -0.55
GGA3-221ENST00000614198 SLC20A2Q08357 652 aa11.63□□□□□ -0.55
GGA3-221ENST00000614198 APOBRQ0VD83 1088 aa11.63□□□□□ -0.55
GGA3-221ENST00000614198 NSUN4Q96CB9 384 aaKnown RBP11.63□□□□□ -0.55
GGA3-221ENST00000614198 NCOA5Q9HCD5 579 aaKnown RBP11.63□□□□□ -0.55
GGA3-221ENST00000614198 CD209Q9NNX6 404 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms