RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 PLIN1O60240 522 aa13.16□□□□□ -0.3
SSX3-204ENST00000612497 CSF1RP07333 972 aa13.16□□□□□ -0.3
SSX3-204ENST00000612497 MAGEA10P43363 369 aaPredicted RBP13.16□□□□□ -0.3
SSX3-204ENST00000612497 FLT3LGP49771 235 aa13.16□□□□□ -0.3
SSX3-204ENST00000612497 RUNDC1Q96C34 613 aa13.16□□□□□ -0.3
SSX3-204ENST00000612497 CRISPLD2Q9H0B8 497 aa13.16□□□□□ -0.3
SSX3-204ENST00000612497 TAOK2Q9UL54 1235 aa13.16□□□□□ -0.3
SSX3-204ENST00000612497 DOCK3Q8IZD9 2030 aa13.16□□□□□ -0.3
SSX3-204ENST00000612497 AK9Q5TCS8 1911 aa13.15□□□□□ -0.3
SSX3-204ENST00000612497 CYP2C8P10632 490 aa13.15□□□□□ -0.3
SSX3-204ENST00000612497 BCRP11274 1271 aa13.15□□□□□ -0.3
SSX3-204ENST00000612497 INPP5BP32019 993 aa13.15□□□□□ -0.3
SSX3-204ENST00000612497 DCAF15Q66K64 600 aa13.15□□□□□ -0.3
SSX3-204ENST00000612497 MIGA2Q7L4E1 593 aa13.15□□□□□ -0.3
SSX3-204ENST00000612497 C8orf58Q8NAV2 365 aa13.15□□□□□ -0.3
SSX3-204ENST00000612497 PXYLP1Q8TE99 480 aa13.15□□□□□ -0.3
SSX3-204ENST00000612497 CHMP4AQ9BY43 222 aa13.15□□□□□ -0.3
SSX3-204ENST00000612497 PAK6Q9NQU5 681 aaPredicted RBP13.15□□□□□ -0.3
SSX3-204ENST00000612497 TMOD2Q9NZR1 351 aa13.15□□□□□ -0.3
SSX3-204ENST00000612497 CHMP3Q9Y3E7 222 aa13.15□□□□□ -0.3
SSX3-204ENST00000612497 EYSQ5T1H1 3165 aa13.14□□□□□ -0.31
SSX3-204ENST00000612497 IFIT5Q13325 482 aaKnown RBP13.14□□□□□ -0.31
SSX3-204ENST00000612497 GCKRQ14397 625 aa13.14□□□□□ -0.31
SSX3-204ENST00000612497 TDRD7Q8NHU6 1098 aaKnown RBP13.14□□□□□ -0.31
SSX3-204ENST00000612497 ZNF341Q9BYN7 854 aa13.14□□□□□ -0.31
SSX3-204ENST00000612497 KCNH4Q9UQ05 1017 aa13.14□□□□□ -0.31
SSX3-204ENST00000612497 PRUNE2Q8WUY3 3088 aa13.14□□□□□ -0.31
SSX3-204ENST00000612497 TNPO2O14787 897 aaKnown RBP13.13□□□□□ -0.31
SSX3-204ENST00000612497 ZNF853P0CG23 659 aa13.13□□□□□ -0.31
SSX3-204ENST00000612497 GYG1P46976 350 aa13.13□□□□□ -0.31
SSX3-204ENST00000612497 IRF5Q13568 498 aa13.13□□□□□ -0.31
SSX3-204ENST00000612497 MOGSQ13724 837 aa13.13□□□□□ -0.31
SSX3-204ENST00000612497 FAM83AQ86UY5 434 aa13.13□□□□□ -0.31
SSX3-204ENST00000612497 HIBADHP31937 336 aaKnown RBP13.12□□□□□ -0.31
SSX3-204ENST00000612497 CASP7P55210 303 aa13.12□□□□□ -0.31
SSX3-204ENST00000612497 GNAI1P63096 354 aa13.12□□□□□ -0.31
SSX3-204ENST00000612497 GRIK5Q16478 980 aa13.12□□□□□ -0.31
SSX3-204ENST00000612497 ANKLE1Q8NAG6 615 aa13.12□□□□□ -0.31
SSX3-204ENST00000612497 TEKT1Q969V4 418 aa13.12□□□□□ -0.31
SSX3-204ENST00000612497 FAM161BQ96MY7 647 aa13.12□□□□□ -0.31
SSX3-204ENST00000612497 GUCD1Q96NT3 240 aa13.12□□□□□ -0.31
SSX3-204ENST00000612497 NBPF3Q9H094 633 aa13.12□□□□□ -0.31
SSX3-204ENST00000612497 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.12□□□□□ -0.31
SSX3-204ENST00000612497 IFT57Q9NWB7 429 aa13.12□□□□□ -0.31
SSX3-204ENST00000612497 HDLBPQ00341 1268 aaKnown RBP13.11□□□□□ -0.31
SSX3-204ENST00000612497 TAF7LQ5H9L4 462 aa13.11□□□□□ -0.31
SSX3-204ENST00000612497 GPAT2Q6NUI2 795 aa13.11□□□□□ -0.31
SSX3-204ENST00000612497 STK31Q9BXU1 1019 aa13.11□□□□□ -0.31
SSX3-204ENST00000612497 MYH16Q9H6N6 1097 aa13.11□□□□□ -0.31
SSX3-204ENST00000612497 CNNM1Q9NRU3 951 aa13.11□□□□□ -0.31
SSX3-204ENST00000612497 DDX60LQ5H9U9 1706 aaKnown RBP13.1□□□□□ -0.31
SSX3-204ENST00000612497 POTEB2H3BUK9 544 aa13.1□□□□□ -0.31
SSX3-204ENST00000612497 CHAF1AQ13111 956 aaPredicted RBP13.1□□□□□ -0.31
SSX3-204ENST00000612497 WDR43Q15061 677 aaKnown RBP eCLIP13.1□□□□□ -0.31
SSX3-204ENST00000612497 FKBP1CQ5VVH2 108 aa13.1□□□□□ -0.31
SSX3-204ENST00000612497 LDHAL6AQ6ZMR3 332 aa13.1□□□□□ -0.31
SSX3-204ENST00000612497 ZNF594Q96JF6 807 aaPredicted RBP13.1□□□□□ -0.31
SSX3-204ENST00000612497 FAM84BQ96KN1 310 aaPredicted RBP13.1□□□□□ -0.31
SSX3-204ENST00000612497 C11orf49Q9H6J7 331 aa13.1□□□□□ -0.31
SSX3-204ENST00000612497 CXCL11O14625 94 aa13.09□□□□□ -0.31
SSX3-204ENST00000612497 CALD1Q05682 793 aaKnown RBP13.09□□□□□ -0.31
SSX3-204ENST00000612497 CCDC57Q2TAC2 916 aa13.09□□□□□ -0.31
SSX3-204ENST00000612497 FAM109BQ6ICB4 259 aaPredicted RBP13.09□□□□□ -0.31
SSX3-204ENST00000612497 G2E3Q7L622 706 aa13.09□□□□□ -0.31
SSX3-204ENST00000612497 TSPYL6Q8N831 410 aa13.09□□□□□ -0.31
SSX3-204ENST00000612497 COA7Q96BR5 231 aa13.09□□□□□ -0.31
SSX3-204ENST00000612497 ZDHHC15Q96MV8 337 aa13.09□□□□□ -0.31
SSX3-204ENST00000612497 IQSEC3Q9UPP2 1182 aaPredicted RBP13.09□□□□□ -0.31
SSX3-204ENST00000612497 FRAT2O75474 233 aaPredicted RBP13.08□□□□□ -0.32
SSX3-204ENST00000612497 COL9A1P20849 921 aa13.08□□□□□ -0.32
SSX3-204ENST00000612497 FOXO4P98177 505 aa13.08□□□□□ -0.32
SSX3-204ENST00000612497 UBE4AQ14139 1066 aa13.08□□□□□ -0.32
SSX3-204ENST00000612497 APOBEC3HQ6NTF7 200 aaKnown RBP13.08□□□□□ -0.32
SSX3-204ENST00000612497 GADL1Q6ZQY3 521 aa13.08□□□□□ -0.32
SSX3-204ENST00000612497 FASTKD5Q7L8L6 764 aaKnown RBP13.08□□□□□ -0.32
SSX3-204ENST00000612497 VPS37DQ86XT2 251 aa13.08□□□□□ -0.32
SSX3-204ENST00000612497 SMCR8Q8TEV9 937 aaPredicted RBP13.08□□□□□ -0.32
SSX3-204ENST00000612497 TBC1D22AQ8WUA7 517 aa13.08□□□□□ -0.32
SSX3-204ENST00000612497 HMX1Q9NP08 348 aaPredicted RBP13.08□□□□□ -0.32
SSX3-204ENST00000612497 ZNF112Q9UJU3 913 aa13.08□□□□□ -0.32
SSX3-204ENST00000612497 SPTBN5Q9NRC6 3674 aaKnown RBP13.08□□□□□ -0.32
SSX3-204ENST00000612497 TTC28Q96AY4 2481 aa13.07□□□□□ -0.32
SSX3-204ENST00000612497 RPAP1Q9BWH6 1393 aaPredicted RBP13.07□□□□□ -0.32
SSX3-204ENST00000612497 MDM2Q00987 491 aaPredicted RBP13.07□□□□□ -0.32
SSX3-204ENST00000612497 RALBP1Q15311 655 aa13.07□□□□□ -0.32
SSX3-204ENST00000612497 NOL9Q5SY16 702 aaKnown RBP13.07□□□□□ -0.32
SSX3-204ENST00000612497 ZNF697Q5TEC3 545 aa13.07□□□□□ -0.32
SSX3-204ENST00000612497 LINS1Q8NG48 757 aa13.07□□□□□ -0.32
SSX3-204ENST00000612497 ADAMTS8Q9UP79 889 aa13.07□□□□□ -0.32
SSX3-204ENST00000612497 DNAH12Q6ZR08 3092 aa13.06□□□□□ -0.32
SSX3-204ENST00000612497 A0A0G2JLL6 359 aaPredicted RBP13.06□□□□□ -0.32
SSX3-204ENST00000612497 HMGCRP04035 888 aa13.06□□□□□ -0.32
SSX3-204ENST00000612497 SLC4A2P04920 1241 aa13.06□□□□□ -0.32
SSX3-204ENST00000612497 TCP10Q12799 353 aa13.06□□□□□ -0.32
SSX3-204ENST00000612497 LMBR1LQ6UX01 489 aa13.06□□□□□ -0.32
SSX3-204ENST00000612497 PRRT2Q7Z6L0 340 aaPredicted RBP13.06□□□□□ -0.32
SSX3-204ENST00000612497 ANKRD13CQ8N6S4 541 aa13.06□□□□□ -0.32
SSX3-204ENST00000612497 MAFAQ8NHW3 353 aaPredicted RBP13.06□□□□□ -0.32
SSX3-204ENST00000612497 FAM151AQ8WW52 585 aa13.06□□□□□ -0.32
SSX3-204ENST00000612497 DNAAF4Q8WXU2 420 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms