RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 DHX32Q7L7V1 743 aaKnown RBP14.65□□□□□ -0.06
USP6NL-205ENST00000609104 OGFOD1Q8N543 542 aa14.65□□□□□ -0.06
USP6NL-205ENST00000609104 SNAPC4Q5SXM2 1469 aa14.65□□□□□ -0.06
USP6NL-205ENST00000609104 GOLGA6CA6NDK9 693 aa14.65□□□□□ -0.06
USP6NL-205ENST00000609104 GOLGA6DP0CG33 693 aa14.65□□□□□ -0.06
USP6NL-205ENST00000609104 GOLGA6AQ9NYA3 693 aa14.65□□□□□ -0.06
USP6NL-205ENST00000609104 ERCC3P19447 782 aa14.65□□□□□ -0.06
USP6NL-205ENST00000609104 NDUFAB1O14561 156 aa14.65□□□□□ -0.06
USP6NL-205ENST00000609104 SDCCAG8Q86SQ7 713 aaPredicted RBP14.65□□□□□ -0.06
USP6NL-205ENST00000609104 TNFAIP3P21580 790 aa14.65□□□□□ -0.06
USP6NL-205ENST00000609104 ERCC6LQ2NKX8 1250 aa14.65□□□□□ -0.06
USP6NL-205ENST00000609104 HDAC9Q9UKV0 1011 aa14.65□□□□□ -0.06
USP6NL-205ENST00000609104 POLR2DO15514 142 aaKnown RBP14.65□□□□□ -0.06
USP6NL-205ENST00000609104 ERO1AQ96HE7 468 aa14.65□□□□□ -0.06
USP6NL-205ENST00000609104 JAG2Q9Y219 1238 aa14.65□□□□□ -0.06
USP6NL-205ENST00000609104 CYP26C1Q6V0L0 522 aa14.65□□□□□ -0.06
USP6NL-205ENST00000609104 CCDC170Q8IYT3 715 aa14.65□□□□□ -0.06
USP6NL-205ENST00000609104 ARHGAP45Q92619 1136 aa14.65□□□□□ -0.06
USP6NL-205ENST00000609104 FEZ2Q9UHY8 353 aaPredicted RBP14.65□□□□□ -0.06
USP6NL-205ENST00000609104 NIP7Q9Y221 180 aaKnown RBP eCLIP14.65□□□□□ -0.06
USP6NL-205ENST00000609104 SARNPP82979 210 aaKnown RBP14.65□□□□□ -0.06
USP6NL-205ENST00000609104 C8orf74Q6P047 294 aa14.65□□□□□ -0.06
USP6NL-205ENST00000609104 NLRP3Q96P20 1036 aa14.65□□□□□ -0.06
USP6NL-205ENST00000609104 RIOK3O14730 519 aaKnown RBP14.64□□□□□ -0.07
USP6NL-205ENST00000609104 RPL13P26373 211 aaKnown RBP14.64□□□□□ -0.07
USP6NL-205ENST00000609104 ITIH3Q06033 890 aa14.64□□□□□ -0.07
USP6NL-205ENST00000609104 CLUL1Q15846 466 aa14.64□□□□□ -0.07
USP6NL-205ENST00000609104 ZNF804AQ7Z570 1209 aa14.64□□□□□ -0.07
USP6NL-205ENST00000609104 VEZTQ9HBM0 779 aa14.64□□□□□ -0.07
USP6NL-205ENST00000609104 TBC1D8BQ0IIM8 1120 aa14.64□□□□□ -0.07
USP6NL-205ENST00000609104 LETM2Q2VYF4 491 aa14.64□□□□□ -0.07
USP6NL-205ENST00000609104 HAUS7Q99871 368 aa14.64□□□□□ -0.07
USP6NL-205ENST00000609104 RBM28Q9NW13 759 aaKnown RBP14.64□□□□□ -0.07
USP6NL-205ENST00000609104 MAP3K1Q13233 1512 aa14.64□□□□□ -0.07
USP6NL-205ENST00000609104 RNF113AO15541 343 aaKnown RBP14.64□□□□□ -0.07
USP6NL-205ENST00000609104 ASIC2Q16515 512 aa14.64□□□□□ -0.07
USP6NL-205ENST00000609104 SIRT1Q96EB6 747 aa14.64□□□□□ -0.07
USP6NL-205ENST00000609104 CSRNP2Q9H175 543 aa14.64□□□□□ -0.07
USP6NL-205ENST00000609104 GRM1Q13255 1194 aa14.64□□□□□ -0.07
USP6NL-205ENST00000609104 FNBP1Q96RU3 617 aa14.64□□□□□ -0.07
USP6NL-205ENST00000609104 CARD6Q9BX69 1037 aa14.64□□□□□ -0.07
USP6NL-205ENST00000609104 WDR44Q5JSH3 913 aa14.64□□□□□ -0.07
USP6NL-205ENST00000609104 ACEP12821 1306 aa14.64□□□□□ -0.07
USP6NL-205ENST00000609104 HARSP12081 509 aaKnown RBP14.64□□□□□ -0.07
USP6NL-205ENST00000609104 PPP2R5CQ13362 524 aa14.64□□□□□ -0.07
USP6NL-205ENST00000609104 LMNTD2Q8IXW0 634 aa14.64□□□□□ -0.07
USP6NL-205ENST00000609104 INPP5BP32019 993 aa14.63□□□□□ -0.07
USP6NL-205ENST00000609104 GBP7Q8N8V2 638 aaPredicted RBP14.63□□□□□ -0.07
USP6NL-205ENST00000609104 FAM204AQ9H8W3 233 aa14.63□□□□□ -0.07
USP6NL-205ENST00000609104 PDE4DQ08499 809 aa14.63□□□□□ -0.07
USP6NL-205ENST00000609104 KSR2Q6VAB6 950 aa14.63□□□□□ -0.07
USP6NL-205ENST00000609104 TRIM31Q9BZY9 425 aa14.63□□□□□ -0.07
USP6NL-205ENST00000609104 IFT20Q8IY31 132 aa14.63□□□□□ -0.07
USP6NL-205ENST00000609104 NOS1P29475 1434 aa14.63□□□□□ -0.07
USP6NL-205ENST00000609104 TFCP2Q12800 502 aa14.63□□□□□ -0.07
USP6NL-205ENST00000609104 FMNL3Q8IVF7 1028 aa14.63□□□□□ -0.07
USP6NL-205ENST00000609104 HELBQ8NG08 1087 aaPredicted RBP14.63□□□□□ -0.07
USP6NL-205ENST00000609104 VCX3BQ9H321 246 aa14.63□□□□□ -0.07
USP6NL-205ENST00000609104 PKD2L1Q9P0L9 805 aa14.63□□□□□ -0.07
USP6NL-205ENST00000609104 RBSNQ9H1K0 784 aa14.63□□□□□ -0.07
USP6NL-205ENST00000609104 BACH1O14867 736 aa14.63□□□□□ -0.07
USP6NL-205ENST00000609104 PPP2R5DQ14738 602 aa14.63□□□□□ -0.07
USP6NL-205ENST00000609104 TAF12Q16514 161 aa14.63□□□□□ -0.07
USP6NL-205ENST00000609104 A0A1B0GUA9 196 aa14.62□□□□□ -0.07
USP6NL-205ENST00000609104 SAP30BPQ9UHR5 308 aaKnown RBP14.62□□□□□ -0.07
USP6NL-205ENST00000609104 ACTN4O43707 911 aaKnown RBP14.62□□□□□ -0.07
USP6NL-205ENST00000609104 STX10O60499 249 aa14.62□□□□□ -0.07
USP6NL-205ENST00000609104 CPA1P15085 419 aa14.62□□□□□ -0.07
USP6NL-205ENST00000609104 CEP128Q6ZU80 1094 aa14.62□□□□□ -0.07
USP6NL-205ENST00000609104 TACC3Q9Y6A5 838 aa14.62□□□□□ -0.07
USP6NL-205ENST00000609104 CLNS1AP54105 237 aaKnown RBP14.62□□□□□ -0.07
USP6NL-205ENST00000609104 SMC5Q8IY18 1101 aa14.62□□□□□ -0.07
USP6NL-205ENST00000609104 TTC41PQ6P2S7 1318 aa14.62□□□□□ -0.07
USP6NL-205ENST00000609104 ZCRB1Q8TBF4 217 aaKnown RBP14.62□□□□□ -0.07
USP6NL-205ENST00000609104 BICC1Q9H694 974 aaKnown RBP14.62□□□□□ -0.07
USP6NL-205ENST00000609104 SEC24BO95487 1268 aa14.62□□□□□ -0.07
USP6NL-205ENST00000609104 PSMB7Q99436 277 aa14.62□□□□□ -0.07
USP6NL-205ENST00000609104 BIRC3Q13489 604 aa14.62□□□□□ -0.07
USP6NL-205ENST00000609104 CEP85Q6P2H3 762 aa14.62□□□□□ -0.07
USP6NL-205ENST00000609104 FAM184BQ9ULE4 1060 aa14.62□□□□□ -0.07
USP6NL-205ENST00000609104 RALGAPBQ86X10 1494 aa14.61□□□□□ -0.07
USP6NL-205ENST00000609104 TXNDC9O14530 226 aa14.61□□□□□ -0.07
USP6NL-205ENST00000609104 FBXO31Q5XUX0 539 aaPredicted RBP14.61□□□□□ -0.07
USP6NL-205ENST00000609104 DAPK3O43293 454 aa14.61□□□□□ -0.07
USP6NL-205ENST00000609104 INTS4Q96HW7 963 aaKnown RBP14.61□□□□□ -0.07
USP6NL-205ENST00000609104 PDE1CQ14123 709 aaPredicted RBP14.61□□□□□ -0.07
USP6NL-205ENST00000609104 BEND3Q5T5X7 828 aa14.61□□□□□ -0.07
USP6NL-205ENST00000609104 RBM26Q5T8P6 1007 aaKnown RBP14.61□□□□□ -0.07
USP6NL-205ENST00000609104 TBC1D31Q96DN5 1066 aa14.61□□□□□ -0.07
USP6NL-205ENST00000609104 NUF2Q9BZD4 464 aa14.61□□□□□ -0.07
USP6NL-205ENST00000609104 PARP1P09874 1014 aaKnown RBP14.61□□□□□ -0.07
USP6NL-205ENST00000609104 ELF2Q15723 593 aa14.61□□□□□ -0.07
USP6NL-205ENST00000609104 UBL4BQ8N7F7 174 aa14.61□□□□□ -0.07
USP6NL-205ENST00000609104 RIMBP2O15034 1052 aa14.61□□□□□ -0.07
USP6NL-205ENST00000609104 TAOK1Q7L7X3 1001 aa14.61□□□□□ -0.07
USP6NL-205ENST00000609104 CCDC169A6NNP5 214 aa14.61□□□□□ -0.07
USP6NL-205ENST00000609104 CNNM4Q6P4Q7 775 aa14.61□□□□□ -0.07
USP6NL-205ENST00000609104 MAEAQ7L5Y9 396 aa14.61□□□□□ -0.07
USP6NL-205ENST00000609104 GPCPD1Q9NPB8 672 aa14.61□□□□□ -0.07
USP6NL-205ENST00000609104 CCDC62Q6P9F0 684 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms