RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 ZNF165P49910 485 aa7.43□□□□□ -1.22
LINC00397-202ENST00000606785 EIF6P56537 245 aaKnown RBP7.43□□□□□ -1.22
LINC00397-202ENST00000606785 TBC1D8BQ0IIM8 1120 aa7.43□□□□□ -1.22
LINC00397-202ENST00000606785 RASA3Q14644 834 aa7.43□□□□□ -1.22
LINC00397-202ENST00000606785 LRRC14Q15048 493 aa7.43□□□□□ -1.22
LINC00397-202ENST00000606785 FOXR1Q6PIV2 292 aa7.43□□□□□ -1.22
LINC00397-202ENST00000606785 ALYREFQ86V81 257 aaKnown RBP7.43□□□□□ -1.22
LINC00397-202ENST00000606785 DEPDC7Q96QD5 511 aa7.43□□□□□ -1.22
LINC00397-202ENST00000606785 FERD3LQ96RJ6 166 aa7.43□□□□□ -1.22
LINC00397-202ENST00000606785 SOX13Q9UN79 622 aa7.43□□□□□ -1.22
LINC00397-202ENST00000606785 ENPP3O14638 875 aa7.42□□□□□ -1.22
LINC00397-202ENST00000606785 PTPRAP18433 802 aa7.42□□□□□ -1.22
LINC00397-202ENST00000606785 MCM4P33991 863 aa7.42□□□□□ -1.22
LINC00397-202ENST00000606785 SEPT6Q14141 434 aa7.42□□□□□ -1.22
LINC00397-202ENST00000606785 ZNF423Q2M1K9 1284 aa7.42□□□□□ -1.22
LINC00397-202ENST00000606785 LLGL2Q6P1M3 1020 aa7.42□□□□□ -1.22
LINC00397-202ENST00000606785 VN1R5Q7Z5H4 357 aa7.42□□□□□ -1.22
LINC00397-202ENST00000606785 FAM35AQ86V20 835 aa7.42□□□□□ -1.22
LINC00397-202ENST00000606785 SULF2Q8IWU5 870 aa7.42□□□□□ -1.22
LINC00397-202ENST00000606785 REXO1Q8N1G1 1221 aaKnown RBP7.42□□□□□ -1.22
LINC00397-202ENST00000606785 MICALL1Q8N3F8 863 aa7.42□□□□□ -1.22
LINC00397-202ENST00000606785 OR6P1Q8NGX9 317 aa7.42□□□□□ -1.22
LINC00397-202ENST00000606785 PLD4Q96BZ4 506 aa7.42□□□□□ -1.22
LINC00397-202ENST00000606785 CRBNQ96SW2 442 aa7.42□□□□□ -1.22
LINC00397-202ENST00000606785 CPB1P15086 417 aa7.41□□□□□ -1.22
LINC00397-202ENST00000606785 ARNTP27540 789 aa7.41□□□□□ -1.22
LINC00397-202ENST00000606785 REC114Q7Z4M0 266 aa7.41□□□□□ -1.22
LINC00397-202ENST00000606785 FAM169BQ8N8A8 192 aa7.41□□□□□ -1.22
LINC00397-202ENST00000606785 TNFRSF25Q93038 417 aa7.41□□□□□ -1.22
LINC00397-202ENST00000606785 ACDQ96AP0 544 aa7.41□□□□□ -1.22
LINC00397-202ENST00000606785 RNPC3Q96LT9 517 aaKnown RBP7.41□□□□□ -1.22
LINC00397-202ENST00000606785 EMILIN2Q9BXX0 1053 aa7.41□□□□□ -1.22
LINC00397-202ENST00000606785 ADAM19Q9H013 955 aa7.41□□□□□ -1.22
LINC00397-202ENST00000606785 ZNRF3Q9ULT6 936 aa7.41□□□□□ -1.22
LINC00397-202ENST00000606785 MSRB2Q9Y3D2 182 aa7.41□□□□□ -1.22
LINC00397-202ENST00000606785 FAM221BA6H8Z2 402 aa7.4□□□□□ -1.22
LINC00397-202ENST00000606785 BPNT1O95861 308 aa7.4□□□□□ -1.22
LINC00397-202ENST00000606785 ESRRAP11474 423 aaPredicted RBP7.4□□□□□ -1.22
LINC00397-202ENST00000606785 IMPDH2P12268 514 aa7.4□□□□□ -1.22
LINC00397-202ENST00000606785 PERM1Q5SV97 790 aa7.4□□□□□ -1.22
LINC00397-202ENST00000606785 FBXW10Q5XX13 1052 aa7.4□□□□□ -1.22
LINC00397-202ENST00000606785 SCARA3Q6AZY7 606 aa7.4□□□□□ -1.22
LINC00397-202ENST00000606785 ADAMTSL4Q6UY14 1074 aa7.4□□□□□ -1.22
LINC00397-202ENST00000606785 STK35Q8TDR2 534 aa7.4□□□□□ -1.22
LINC00397-202ENST00000606785 GAL3ST3Q96A11 431 aa7.4□□□□□ -1.22
LINC00397-202ENST00000606785 CCDC113Q9H0I3 377 aa7.4□□□□□ -1.22
LINC00397-202ENST00000606785 BRMS1Q9HCU9 246 aa7.4□□□□□ -1.22
LINC00397-202ENST00000606785 AVENQ9NQS1 362 aaPredicted RBP7.4□□□□□ -1.22
LINC00397-202ENST00000606785 ACTR10Q9NZ32 417 aa7.4□□□□□ -1.22
LINC00397-202ENST00000606785 SLC6A14Q9UN76 642 aa7.4□□□□□ -1.22
LINC00397-202ENST00000606785 KRBA1A5PL33 1030 aa7.39□□□□□ -1.23
LINC00397-202ENST00000606785 GPR25O00155 361 aa7.39□□□□□ -1.23
LINC00397-202ENST00000606785 C2CD2LO14523 706 aa7.39□□□□□ -1.23
LINC00397-202ENST00000606785 BMP4P12644 408 aa7.39□□□□□ -1.23
LINC00397-202ENST00000606785 ELMSAN1Q6PJG2 1045 aa7.39□□□□□ -1.23
LINC00397-202ENST00000606785 GK5Q6ZS86 529 aa7.39□□□□□ -1.23
LINC00397-202ENST00000606785 CELF2-AS1Q8N7Q2 184 aa7.39□□□□□ -1.23
LINC00397-202ENST00000606785 GRIN3AQ8TCU5 1115 aa7.39□□□□□ -1.23
LINC00397-202ENST00000606785 DDX54Q8TDD1 881 aaKnown RBP7.39□□□□□ -1.23
LINC00397-202ENST00000606785 CBX8Q9HC52 389 aa7.39□□□□□ -1.23
LINC00397-202ENST00000606785 CCDC85CA6NKD9 419 aa7.38□□□□□ -1.23
LINC00397-202ENST00000606785 FAM177BA6PVY3 158 aa7.38□□□□□ -1.23
LINC00397-202ENST00000606785 PCBP4P57723 403 aaKnown RBP7.38□□□□□ -1.23
LINC00397-202ENST00000606785 RPL6Q02878 288 aaKnown RBP7.38□□□□□ -1.23
LINC00397-202ENST00000606785 CLCQ05315 142 aa7.38□□□□□ -1.23
LINC00397-202ENST00000606785 ZNF252P-AS1Q0IIN9 211 aa7.38□□□□□ -1.23
LINC00397-202ENST00000606785 DDR2Q16832 855 aa7.38□□□□□ -1.23
LINC00397-202ENST00000606785 RBBP8NLQ8NC74 664 aaPredicted RBP7.38□□□□□ -1.23
LINC00397-202ENST00000606785 LACRTQ9GZZ8 138 aa7.38□□□□□ -1.23
LINC00397-202ENST00000606785 SMG9Q9H0W8 520 aaKnown RBP7.38□□□□□ -1.23
LINC00397-202ENST00000606785 FRRS1LQ9P0K9 344 aa7.38□□□□□ -1.23
LINC00397-202ENST00000606785 NAGPAQ9UK23 515 aa7.38□□□□□ -1.23
LINC00397-202ENST00000606785 TRIM33Q9UPN9 1127 aa7.38□□□□□ -1.23
LINC00397-202ENST00000606785 FURINP09958 794 aa7.37□□□□□ -1.23
LINC00397-202ENST00000606785 ADH7P40394 386 aa7.37□□□□□ -1.23
LINC00397-202ENST00000606785 IKBKEQ14164 716 aa7.37□□□□□ -1.23
LINC00397-202ENST00000606785 PDZD3Q86UT5 571 aa7.37□□□□□ -1.23
LINC00397-202ENST00000606785 LSRQ86X29 649 aaPredicted RBP7.37□□□□□ -1.23
LINC00397-202ENST00000606785 KRTAP1-3Q8IUG1 177 aa7.37□□□□□ -1.23
LINC00397-202ENST00000606785 LPIN3Q9BQK8 851 aa7.37□□□□□ -1.23
LINC00397-202ENST00000606785 EHMT1Q9H9B1 1298 aa7.37□□□□□ -1.23
LINC00397-202ENST00000606785 ADARB2-AS1A8MUL3 147 aa7.36□□□□□ -1.23
LINC00397-202ENST00000606785 OIP5O43482 229 aa7.36□□□□□ -1.23
LINC00397-202ENST00000606785 TRIM37O94972 964 aa7.36□□□□□ -1.23
LINC00397-202ENST00000606785 CABP4P57796 275 aa7.36□□□□□ -1.23
LINC00397-202ENST00000606785 PTPN11Q06124 597 aaPredicted RBP7.36□□□□□ -1.23
LINC00397-202ENST00000606785 AP3B2Q13367 1082 aa7.36□□□□□ -1.23
LINC00397-202ENST00000606785 TTC9Q92623 222 aa7.36□□□□□ -1.23
LINC00397-202ENST00000606785 ST7Q9NRC1 585 aa7.36□□□□□ -1.23
LINC00397-202ENST00000606785 SH2B1Q9NRF2 756 aaPredicted RBP7.36□□□□□ -1.23
LINC00397-202ENST00000606785 NSFL1CQ9UNZ2 370 aaKnown RBP7.36□□□□□ -1.23
LINC00397-202ENST00000606785 MAPK8IP1Q9UQF2 711 aa7.36□□□□□ -1.23
LINC00397-202ENST00000606785 PCDHB14Q9Y5E9 798 aa7.36□□□□□ -1.23
LINC00397-202ENST00000606785 PDPK1O15530 556 aa7.35□□□□□ -1.23
LINC00397-202ENST00000606785 ATE1O95260 518 aa7.35□□□□□ -1.23
LINC00397-202ENST00000606785 ARAFP10398 606 aa7.35□□□□□ -1.23
LINC00397-202ENST00000606785 ADH6P28332 368 aa7.35□□□□□ -1.23
LINC00397-202ENST00000606785 CDC27P30260 824 aa7.35□□□□□ -1.23
LINC00397-202ENST00000606785 CASP7P55210 303 aa7.35□□□□□ -1.23
LINC00397-202ENST00000606785 CHMP4BP1P59074 171 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms