RNA–Protein interactions for RNA: ENST00000602959.5

UBE2E3-213, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBE2E3, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-213ENST00000602959 RPAP1Q9BWH6 1393 aaPredicted RBP29.67■■■□□ 2.34
UBE2E3-213ENST00000602959 PPP1R12BO60237 982 aaPredicted RBP29.67■■■□□ 2.34
UBE2E3-213ENST00000602959 LDLRAD1Q5T700 205 aa29.67■■■□□ 2.34
UBE2E3-213ENST00000602959 CDC42EP5Q6NZY7 148 aa29.67■■■□□ 2.34
UBE2E3-213ENST00000602959 TMEM39BQ9GZU3 492 aa29.67■■■□□ 2.34
UBE2E3-213ENST00000602959 ANGEL1Q9UNK9 670 aaKnown RBP29.67■■■□□ 2.34
UBE2E3-213ENST00000602959 MYO5AQ9Y4I1 1855 aaKnown RBP29.66■■■□□ 2.34
UBE2E3-213ENST00000602959 MECOMQ03112 1051 aa29.66■■■□□ 2.34
UBE2E3-213ENST00000602959 PRKG1Q13976 671 aa29.66■■■□□ 2.34
UBE2E3-213ENST00000602959 TBC1D9Q6ZT07 1266 aa29.66■■■□□ 2.34
UBE2E3-213ENST00000602959 ZNF384Q8TF68 577 aa29.66■■■□□ 2.34
UBE2E3-213ENST00000602959 OTOFQ9HC10 1997 aa29.66■■■□□ 2.34
UBE2E3-213ENST00000602959 CDAN1Q8IWY9 1227 aa29.65■■■□□ 2.34
UBE2E3-213ENST00000602959 CLASRPQ8N2M8 674 aaKnown RBP29.65■■■□□ 2.34
UBE2E3-213ENST00000602959 AIDAQ96BJ3 306 aa29.65■■■□□ 2.34
UBE2E3-213ENST00000602959 NSUN4Q96CB9 384 aaKnown RBP29.65■■■□□ 2.34
UBE2E3-213ENST00000602959 ZIC5Q96T25 663 aa29.65■■■□□ 2.34
UBE2E3-213ENST00000602959 SNRKQ9NRH2 765 aa29.65■■■□□ 2.34
UBE2E3-213ENST00000602959 FZD1Q9UP38 647 aa29.65■■■□□ 2.34
UBE2E3-213ENST00000602959 MROH7-TTC4A0A0A0MT08 1334 aa29.65■■■□□ 2.34
UBE2E3-213ENST00000602959 APBB1O00213 710 aa29.64■■■□□ 2.34
UBE2E3-213ENST00000602959 FOXN1O15353 648 aa29.63■■■□□ 2.33
UBE2E3-213ENST00000602959 RFX7Q2KHR2 1363 aa29.63■■■□□ 2.33
UBE2E3-213ENST00000602959 DOCK2Q92608 1830 aa29.62■■■□□ 2.33
UBE2E3-213ENST00000602959 UNCXA6NJT0 531 aa29.62■■■□□ 2.33
UBE2E3-213ENST00000602959 IGSF3O75054 1194 aa29.62■■■□□ 2.33
UBE2E3-213ENST00000602959 CYP2E1P05181 493 aaPredicted RBP29.62■■■□□ 2.33
UBE2E3-213ENST00000602959 GSTO1P78417 241 aa29.62■■■□□ 2.33
UBE2E3-213ENST00000602959 USP40Q9NVE5 1235 aa29.62■■■□□ 2.33
UBE2E3-213ENST00000602959 RAI14Q9P0K7 980 aa29.62■■■□□ 2.33
UBE2E3-213ENST00000602959 LRP2BPQ9P2M1 347 aa29.62■■■□□ 2.33
UBE2E3-213ENST00000602959 ZAP70P43403 619 aa29.61■■■□□ 2.33
UBE2E3-213ENST00000602959 LAMB1P07942 1786 aa29.6■■■□□ 2.33
UBE2E3-213ENST00000602959 GPR75-ASB3A0A0A6YYF3 556 aa29.6■■■□□ 2.33
UBE2E3-213ENST00000602959 USP2O75604 605 aaPredicted RBP29.6■■■□□ 2.33
UBE2E3-213ENST00000602959 IREB2P48200 963 aaKnown RBP29.6■■■□□ 2.33
UBE2E3-213ENST00000602959 KIF23Q02241 960 aaPredicted RBP29.6■■■□□ 2.33
UBE2E3-213ENST00000602959 NFIAQ12857 509 aa29.6■■■□□ 2.33
UBE2E3-213ENST00000602959 FAM151AQ8WW52 585 aa29.6■■■□□ 2.33
UBE2E3-213ENST00000602959 CRBNQ96SW2 442 aa29.6■■■□□ 2.33
UBE2E3-213ENST00000602959 LDHCP07864 332 aa29.59■■■□□ 2.33
UBE2E3-213ENST00000602959 BTDP43251 543 aa29.59■■■□□ 2.33
UBE2E3-213ENST00000602959 BEGAINQ9BUH8 593 aa29.59■■■□□ 2.33
UBE2E3-213ENST00000602959 IDI2Q9BXS1 227 aa29.59■■■□□ 2.33
UBE2E3-213ENST00000602959 FAM198AQ9UFP1 575 aa29.59■■■□□ 2.33
UBE2E3-213ENST00000602959 IFIT2P09913 472 aaKnown RBP29.58■■■□□ 2.33
UBE2E3-213ENST00000602959 CTCFP49711 727 aaPredicted RBP29.58■■■□□ 2.33
UBE2E3-213ENST00000602959 AK9Q5TCS8 1911 aa29.58■■■□□ 2.33
UBE2E3-213ENST00000602959 HOOK2Q96ED9 719 aa29.58■■■□□ 2.33
UBE2E3-213ENST00000602959 LRRCC1Q9C099 1032 aa29.58■■■□□ 2.33
UBE2E3-213ENST00000602959 DCTPP1Q9H773 170 aa29.58■■■□□ 2.33
UBE2E3-213ENST00000602959 PCDHB15Q9Y5E8 787 aa29.58■■■□□ 2.33
UBE2E3-213ENST00000602959 PIH1D3Q9NQM4 214 aaKnown RBP29.57■■■□□ 2.32
UBE2E3-213ENST00000602959 CA12O43570 354 aa29.56■■■□□ 2.32
UBE2E3-213ENST00000602959 RHBDL3P58872 404 aa29.56■■■□□ 2.32
UBE2E3-213ENST00000602959 REM2Q8IYK8 340 aaPredicted RBP29.56■■■□□ 2.32
UBE2E3-213ENST00000602959 ANKRD13AQ8IZ07 590 aa29.56■■■□□ 2.32
UBE2E3-213ENST00000602959 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.56■■■□□ 2.32
UBE2E3-213ENST00000602959 ENTPD3O75355 529 aa29.55■■■□□ 2.32
UBE2E3-213ENST00000602959 WDHD1O75717 1129 aaPredicted RBP29.55■■■□□ 2.32
UBE2E3-213ENST00000602959 MAP4K4O95819 1239 aaPredicted RBP29.55■■■□□ 2.32
UBE2E3-213ENST00000602959 TCP10Q12799 353 aa29.55■■■□□ 2.32
UBE2E3-213ENST00000602959 CLMNQ96JQ2 1002 aa29.55■■■□□ 2.32
UBE2E3-213ENST00000602959 RGS3P49796 1198 aa29.54■■■□□ 2.32
UBE2E3-213ENST00000602959 NAA16Q6N069 864 aaPredicted RBP29.54■■■□□ 2.32
UBE2E3-213ENST00000602959 SLC10A4Q96EP9 437 aa29.54■■■□□ 2.32
UBE2E3-213ENST00000602959 HSPA8P11142 646 aaKnown RBP29.53■■■□□ 2.32
UBE2E3-213ENST00000602959 SPRYD7Q5W111 196 aa29.53■■■□□ 2.32
UBE2E3-213ENST00000602959 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.53■■■□□ 2.32
UBE2E3-213ENST00000602959 CSRNP1Q96S65 589 aa29.53■■■□□ 2.32
UBE2E3-213ENST00000602959 NDUFB9Q9Y6M9 179 aa29.53■■■□□ 2.32
UBE2E3-213ENST00000602959 NPM3O75607 178 aaKnown RBP29.52■■■□□ 2.32
UBE2E3-213ENST00000602959 DCAF15Q66K64 600 aa29.52■■■□□ 2.32
UBE2E3-213ENST00000602959 CDK5RAP2Q96SN8 1893 aa29.52■■■□□ 2.32
UBE2E3-213ENST00000602959 FOCADQ5VW36 1801 aa29.51■■■□□ 2.31
UBE2E3-213ENST00000602959 ZBTB48P10074 688 aaPredicted RBP29.51■■■□□ 2.31
UBE2E3-213ENST00000602959 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.51■■■□□ 2.31
UBE2E3-213ENST00000602959 ZFPM1Q8IX07 1006 aa29.51■■■□□ 2.31
UBE2E3-213ENST00000602959 WNK4Q96J92 1243 aa29.51■■■□□ 2.31
UBE2E3-213ENST00000602959 ANTXR1Q9H6X2 564 aa29.51■■■□□ 2.31
UBE2E3-213ENST00000602959 DDX4Q9NQI0 724 aaKnown RBP29.51■■■□□ 2.31
UBE2E3-213ENST00000602959 PRDM10Q9NQV6 1147 aa29.51■■■□□ 2.31
UBE2E3-213ENST00000602959 MAP3K9P80192 1104 aa29.5■■■□□ 2.31
UBE2E3-213ENST00000602959 AAMPQ13685 434 aa29.5■■■□□ 2.31
UBE2E3-213ENST00000602959 TMED8Q6PL24 325 aaPredicted RBP29.5■■■□□ 2.31
UBE2E3-213ENST00000602959 ATRNL1Q5VV63 1379 aa29.5■■■□□ 2.31
UBE2E3-213ENST00000602959 COL2A1P02458 1487 aaPredicted RBP29.49■■■□□ 2.31
UBE2E3-213ENST00000602959 SMARCA5O60264 1052 aaPredicted RBP29.49■■■□□ 2.31
UBE2E3-213ENST00000602959 IDH1O75874 414 aaKnown RBP29.49■■■□□ 2.31
UBE2E3-213ENST00000602959 LBX1P52954 281 aa29.49■■■□□ 2.31
UBE2E3-213ENST00000602959 ADGRA1Q86SQ6 560 aa29.49■■■□□ 2.31
UBE2E3-213ENST00000602959 NOL10Q9BSC4 688 aaKnown RBP29.49■■■□□ 2.31
UBE2E3-213ENST00000602959 BCL11AQ9H165 835 aa29.49■■■□□ 2.31
UBE2E3-213ENST00000602959 SAGE1Q9NXZ1 904 aa29.49■■■□□ 2.31
UBE2E3-213ENST00000602959 BAG3O95817 575 aa29.48■■■□□ 2.31
UBE2E3-213ENST00000602959 ATP5JP18859 108 aa29.48■■■□□ 2.31
UBE2E3-213ENST00000602959 PPP4CP60510 307 aa29.48■■■□□ 2.31
UBE2E3-213ENST00000602959 MKRN3Q13064 507 aaKnown RBP29.48■■■□□ 2.31
UBE2E3-213ENST00000602959 PICALMQ13492 652 aa29.48■■■□□ 2.31
UBE2E3-213ENST00000602959 VGLL4Q14135 290 aa29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms