RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 FAM163AQ96GL9 167 aaPredicted RBP21.37■■□□□ 1.01
VRK3-225ENST00000601912 TTC14Q96N46 770 aa21.37■■□□□ 1.01
VRK3-225ENST00000601912 EPB41L4AQ9HCS5 686 aaPredicted RBP21.37■■□□□ 1.01
VRK3-225ENST00000601912 RPS6KB1P23443 525 aa21.37■■□□□ 1.01
VRK3-225ENST00000601912 PPP4CP60510 307 aa21.37■■□□□ 1.01
VRK3-225ENST00000601912 GIMAP6Q6P9H5 292 aa21.37■■□□□ 1.01
VRK3-225ENST00000601912 BCS1LQ9Y276 419 aa21.37■■□□□ 1.01
VRK3-225ENST00000601912 CPA1P15085 419 aa21.36■■□□□ 1.01
VRK3-225ENST00000601912 SDR42E1Q8WUS8 393 aa21.36■■□□□ 1.01
VRK3-225ENST00000601912 ZNF277Q9NRM2 450 aaPredicted RBP21.36■■□□□ 1.01
VRK3-225ENST00000601912 BRCA1P38398 1863 aaKnown RBP21.36■■□□□ 1.01
VRK3-225ENST00000601912 PLCG2P16885 1265 aa21.35■■□□□ 1.01
VRK3-225ENST00000601912 STOX1Q6ZVD7 989 aa21.35■■□□□ 1.01
VRK3-225ENST00000601912 CERS5Q8N5B7 392 aa21.35■■□□□ 1.01
VRK3-225ENST00000601912 TAOK3Q9H2K8 898 aa21.35■■□□□ 1.01
VRK3-225ENST00000601912 ATP8A2Q9NTI2 1148 aa21.35■■□□□ 1.01
VRK3-225ENST00000601912 TTF2Q9UNY4 1162 aaKnown RBP21.35■■□□□ 1.01
VRK3-225ENST00000601912 GPR75-ASB3A0A0A6YYF3 556 aa21.34■■□□□ 1.01
VRK3-225ENST00000601912 AK2P54819 239 aa21.34■■□□□ 1.01
VRK3-225ENST00000601912 TRDNQ13061 729 aa21.34■■□□□ 1.01
VRK3-225ENST00000601912 ANKRD1Q15327 319 aa21.34■■□□□ 1.01
VRK3-225ENST00000601912 KCNQ5Q9NR82 932 aa21.34■■□□□ 1.01
VRK3-225ENST00000601912 MYH2Q9UKX2 1941 aa21.34■■□□□ 1.01
VRK3-225ENST00000601912 F8W031 263 aaPredicted RBP21.34■■□□□ 1.01
VRK3-225ENST00000601912 BTDP43251 543 aa21.34■■□□□ 1.01
VRK3-225ENST00000601912 DACT2Q5SW24 774 aa21.34■■□□□ 1.01
VRK3-225ENST00000601912 DHX32Q7L7V1 743 aaKnown RBP21.34■■□□□ 1.01
VRK3-225ENST00000601912 NCOA7Q8NI08 942 aa21.34■■□□□ 1.01
VRK3-225ENST00000601912 ALDH8A1Q9H2A2 487 aaPredicted RBP21.34■■□□□ 1.01
VRK3-225ENST00000601912 GAKO14976 1311 aa21.33■■□□□ 1.01
VRK3-225ENST00000601912 IARSP41252 1262 aaKnown RBP21.33■■□□□ 1
VRK3-225ENST00000601912 RALYLQ86SE5 291 aaKnown RBP21.33■■□□□ 1
VRK3-225ENST00000601912 SPRYD3Q8NCJ5 442 aa21.33■■□□□ 1
VRK3-225ENST00000601912 NLGN2Q8NFZ4 835 aa21.33■■□□□ 1
VRK3-225ENST00000601912 MXD3Q9BW11 206 aa21.33■■□□□ 1
VRK3-225ENST00000601912 LIMCH1Q9UPQ0 1083 aa21.33■■□□□ 1
VRK3-225ENST00000601912 NOL8Q76FK4 1167 aaKnown RBP21.32■■□□□ 1
VRK3-225ENST00000601912 NIM1KQ8IY84 436 aa21.32■■□□□ 1
VRK3-225ENST00000601912 TMX3Q96JJ7 454 aa21.32■■□□□ 1
VRK3-225ENST00000601912 USP5P45974 858 aa21.31■■□□□ 1
VRK3-225ENST00000601912 SH3RF3Q8TEJ3 882 aaPredicted RBP21.31■■□□□ 1
VRK3-225ENST00000601912 DCP1AQ9NPI6 582 aaPredicted RBP21.31■■□□□ 1
VRK3-225ENST00000601912 YDJCA8MPS7 323 aa21.31■■□□□ 1
VRK3-225ENST00000601912 FGD1P98174 961 aa21.31■■□□□ 1
VRK3-225ENST00000601912 PPARAQ07869 468 aa21.31■■□□□ 1
VRK3-225ENST00000601912 HHIPL2Q6UWX4 724 aa21.31■■□□□ 1
VRK3-225ENST00000601912 TEKT1Q969V4 418 aa21.31■■□□□ 1
VRK3-225ENST00000601912 MRIQ9BWK5 157 aa21.31■■□□□ 1
VRK3-225ENST00000601912 RNF41Q9H4P4 317 aaPredicted RBP21.31■■□□□ 1
VRK3-225ENST00000601912 DAGLAQ9Y4D2 1042 aa21.31■■□□□ 1
VRK3-225ENST00000601912 LAMA4Q16363 1823 aa21.3■■□□□ 1
VRK3-225ENST00000601912 MINDY4BA8MYZ0 360 aa21.3■■□□□ 1
VRK3-225ENST00000601912 TBC1D10CQ8IV04 446 aa21.3■■□□□ 1
VRK3-225ENST00000601912 JDP2Q8WYK2 163 aa21.3■■□□□ 1
VRK3-225ENST00000601912 ZSCAN31Q96LW9 406 aaPredicted RBP21.3■■□□□ 1
VRK3-225ENST00000601912 NBPF3Q9H094 633 aa21.3■■□□□ 1
VRK3-225ENST00000601912 CNNM2Q9H8M5 875 aa21.3■■□□□ 1
VRK3-225ENST00000601912 ZNRF3Q9ULT6 936 aa21.3■■□□□ 1
VRK3-225ENST00000601912 SCN9AQ15858 1988 aa21.3■■□□□ 1
VRK3-225ENST00000601912 MYO3BQ8WXR4 1341 aa21.29■■□□□ 1
VRK3-225ENST00000601912 MCM5P33992 734 aa21.29■■□□□ 1
VRK3-225ENST00000601912 HDLBPQ00341 1268 aaKnown RBP21.29■■□□□ 1
VRK3-225ENST00000601912 EXOSC10Q01780 885 aaKnown RBP21.29■■□□□ 1
VRK3-225ENST00000601912 AKNAD1Q5T1N1 836 aa21.29■■□□□ 1
VRK3-225ENST00000601912 MFSD6Q6ZSS7 791 aa21.29■■□□□ 1
VRK3-225ENST00000601912 KIAA0825Q8IV33 1275 aa21.29■■□□□ 1
VRK3-225ENST00000601912 TCEANC2Q96MN5 208 aa21.29■■□□□ 1
VRK3-225ENST00000601912 SLKQ9H2G2 1235 aaPredicted RBP21.29■■□□□ 1
VRK3-225ENST00000601912 ARPP21Q9UBL0 812 aaPredicted RBP21.29■■□□□ 1
VRK3-225ENST00000601912 ANAPC4Q9UJX5 808 aa21.29■■□□□ 1
VRK3-225ENST00000601912 LTBP3Q9NS15 1303 aa21.29■■□□□ 1
VRK3-225ENST00000601912 FER1L6Q2WGJ9 1857 aa21.28■■□□□ 1
VRK3-225ENST00000601912 SCNN1DP51172 638 aa21.28■■□□□ 1
VRK3-225ENST00000601912 CTDSPL2Q05D32 466 aa21.28■■□□□ 1
VRK3-225ENST00000601912 CTR9Q6PD62 1173 aa21.28■■□□□ 1
VRK3-225ENST00000601912 Q6ZUG5 572 aa21.28■■□□□ 1
VRK3-225ENST00000601912 AMOTL1Q8IY63 956 aa21.28■■□□□ 1
VRK3-225ENST00000601912 TEX11Q8IYF3 940 aa21.28■■□□□ 1
VRK3-225ENST00000601912 KRT23Q9C075 422 aa21.28■■□□□ 1
VRK3-225ENST00000601912 FHDC1Q9C0D6 1143 aaPredicted RBP21.28■■□□□ 1
VRK3-225ENST00000601912 USP17L12C9JPN9 530 aa21.28■■□□□ 1
VRK3-225ENST00000601912 USP17L21D6R901 530 aa21.28■■□□□ 1
VRK3-225ENST00000601912 NFKBIEO00221 500 aa21.28■■□□□ 1
VRK3-225ENST00000601912 COL9A3Q14050 684 aaPredicted RBP21.28■■□□□ 1
VRK3-225ENST00000601912 SBK1Q52WX2 424 aa21.28■■□□□ 1
VRK3-225ENST00000601912 MB21D2Q8IYB1 491 aaPredicted RBP21.28■■□□□ 1
VRK3-225ENST00000601912 TGFBRAP1Q8WUH2 860 aa21.28■■□□□ 1
VRK3-225ENST00000601912 STAG1Q8WVM7 1258 aa21.28■■□□□ 1
VRK3-225ENST00000601912 SH2B1Q9NRF2 756 aaPredicted RBP21.28■■□□□ 1
VRK3-225ENST00000601912 MCM9Q9NXL9 1143 aa21.28■■□□□ 1
VRK3-225ENST00000601912 WDR19Q8NEZ3 1342 aa21.27■■□□□ 1
VRK3-225ENST00000601912 SLC3A2P08195 630 aaKnown RBP21.27■■□□□ 1
VRK3-225ENST00000601912 CRKP46108 304 aa21.27■■□□□ 1
VRK3-225ENST00000601912 RAD17O75943 681 aa21.26■□□□□ 0.99
VRK3-225ENST00000601912 VIL1P09327 827 aaKnown RBP21.26■□□□□ 0.99
VRK3-225ENST00000601912 PCP11498 1178 aaKnown RBP21.26■□□□□ 0.99
VRK3-225ENST00000601912 RHBDL3P58872 404 aa21.26■□□□□ 0.99
VRK3-225ENST00000601912 CUL4AQ13619 759 aa21.26■□□□□ 0.99
VRK3-225ENST00000601912 TOB2Q14106 344 aaPredicted RBP21.26■□□□□ 0.99
VRK3-225ENST00000601912 RSBN1LQ6PCB5 846 aaPredicted RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms