RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 POTEIP0CG38 1075 aa24.17■■□□□ 1.46
SHKBP1-222ENST00000600320 POTEJP0CG39 1038 aa24.17■■□□□ 1.46
SHKBP1-222ENST00000600320 EAPPQ56P03 285 aaPredicted RBP24.17■■□□□ 1.46
SHKBP1-222ENST00000600320 APPBP2Q92624 585 aa24.17■■□□□ 1.46
SHKBP1-222ENST00000600320 OSBP2Q969R2 916 aa24.17■■□□□ 1.46
SHKBP1-222ENST00000600320 AATFQ9NY61 560 aaKnown RBP eCLIP24.17■■□□□ 1.46
SHKBP1-222ENST00000600320 RHBDL3P58872 404 aa24.16■■□□□ 1.46
SHKBP1-222ENST00000600320 ZMYM1Q5SVZ6 1142 aa24.16■■□□□ 1.46
SHKBP1-222ENST00000600320 CDC42EP5Q6NZY7 148 aa24.16■■□□□ 1.46
SHKBP1-222ENST00000600320 TMED8Q6PL24 325 aaPredicted RBP24.16■■□□□ 1.46
SHKBP1-222ENST00000600320 SEC62Q99442 399 aaKnown RBP24.16■■□□□ 1.46
SHKBP1-222ENST00000600320 PUS7LQ9H0K6 701 aaKnown RBP24.16■■□□□ 1.46
SHKBP1-222ENST00000600320 CLRN2A0PK11 232 aa24.15■■□□□ 1.46
SHKBP1-222ENST00000600320 KIF3CO14782 793 aa24.15■■□□□ 1.46
SHKBP1-222ENST00000600320 PPP4CP60510 307 aa24.15■■□□□ 1.46
SHKBP1-222ENST00000600320 NMIQ13287 307 aaPredicted RBP24.15■■□□□ 1.46
SHKBP1-222ENST00000600320 LRRFIP1Q32MZ4 808 aaKnown RBP24.15■■□□□ 1.46
SHKBP1-222ENST00000600320 FAM227BQ96M60 508 aa24.15■■□□□ 1.46
SHKBP1-222ENST00000600320 RIOK1Q9BRS2 568 aaKnown RBP24.15■■□□□ 1.46
SHKBP1-222ENST00000600320 ZNF70Q9UC06 446 aaPredicted RBP24.15■■□□□ 1.46
SHKBP1-222ENST00000600320 A0A0D9SFI3 127 aa24.14■■□□□ 1.45
SHKBP1-222ENST00000600320 M0R2C6 588 aa24.14■■□□□ 1.45
SHKBP1-222ENST00000600320 C1QTNF8P60827 252 aa24.14■■□□□ 1.45
SHKBP1-222ENST00000600320 SPDYE2Q495Y8 402 aa24.14■■□□□ 1.45
SHKBP1-222ENST00000600320 PNMA8AQ86V59 439 aaPredicted RBP24.14■■□□□ 1.45
SHKBP1-222ENST00000600320 SH3RF3Q8TEJ3 882 aaPredicted RBP24.14■■□□□ 1.45
SHKBP1-222ENST00000600320 USP40Q9NVE5 1235 aa24.14■■□□□ 1.45
SHKBP1-222ENST00000600320 ECM29Q5VYK3 1845 aa24.13■■□□□ 1.45
SHKBP1-222ENST00000600320 MAGEB6P1A0A0J9YX57 407 aa24.13■■□□□ 1.45
SHKBP1-222ENST00000600320 CACNB3P54284 484 aa24.13■■□□□ 1.45
SHKBP1-222ENST00000600320 LCORLQ8N3X6 602 aa24.13■■□□□ 1.45
SHKBP1-222ENST00000600320 GGA3Q9NZ52 723 aa24.13■■□□□ 1.45
SHKBP1-222ENST00000600320 SCAF8Q9UPN6 1271 aaKnown RBP24.13■■□□□ 1.45
SHKBP1-222ENST00000600320 MBD4O95243 580 aa24.12■■□□□ 1.45
SHKBP1-222ENST00000600320 BAG3O95817 575 aa24.12■■□□□ 1.45
SHKBP1-222ENST00000600320 CHMLP26374 656 aa24.12■■□□□ 1.45
SHKBP1-222ENST00000600320 ANGEL2Q5VTE6 544 aaKnown RBP24.12■■□□□ 1.45
SHKBP1-222ENST00000600320 TICAM2Q86XR7 235 aa24.12■■□□□ 1.45
SHKBP1-222ENST00000600320 NOL10Q9BSC4 688 aaKnown RBP24.12■■□□□ 1.45
SHKBP1-222ENST00000600320 ARMT1Q9H993 441 aa24.12■■□□□ 1.45
SHKBP1-222ENST00000600320 CCDC129Q6ZRS4 1044 aa24.11■■□□□ 1.45
SHKBP1-222ENST00000600320 DIAPH3Q9NSV4 1193 aa24.11■■□□□ 1.45
SHKBP1-222ENST00000600320 PGAP2Q9UHJ9 254 aa24.11■■□□□ 1.45
SHKBP1-222ENST00000600320 MYO1BO43795 1136 aa24.1■■□□□ 1.45
SHKBP1-222ENST00000600320 NFIAQ12857 509 aa24.1■■□□□ 1.45
SHKBP1-222ENST00000600320 IL25Q9H293 177 aa24.1■■□□□ 1.45
SHKBP1-222ENST00000600320 VEZTQ9HBM0 779 aa24.1■■□□□ 1.45
SHKBP1-222ENST00000600320 HIP1O00291 1037 aa24.09■■□□□ 1.45
SHKBP1-222ENST00000600320 GPAA1O43292 621 aa24.09■■□□□ 1.45
SHKBP1-222ENST00000600320 WDHD1O75717 1129 aaPredicted RBP24.09■■□□□ 1.45
SHKBP1-222ENST00000600320 CWC27Q6UX04 472 aaKnown RBP24.09■■□□□ 1.45
SHKBP1-222ENST00000600320 LDHDQ86WU2 507 aa24.09■■□□□ 1.45
SHKBP1-222ENST00000600320 TEX11Q8IYF3 940 aa24.09■■□□□ 1.45
SHKBP1-222ENST00000600320 ZC3H15Q8WU90 426 aaKnown RBP24.09■■□□□ 1.45
SHKBP1-222ENST00000600320 HELLSQ9NRZ9 838 aa24.09■■□□□ 1.45
SHKBP1-222ENST00000600320 CLEC11AQ9Y240 323 aa24.09■■□□□ 1.45
SHKBP1-222ENST00000600320 TCP10L2B9ZVM9 353 aa24.08■■□□□ 1.45
SHKBP1-222ENST00000600320 PRKAB2O43741 272 aa24.08■■□□□ 1.45
SHKBP1-222ENST00000600320 ZNF589Q86UQ0 364 aaPredicted RBP24.08■■□□□ 1.45
SHKBP1-222ENST00000600320 AIDAQ96BJ3 306 aa24.08■■□□□ 1.45
SHKBP1-222ENST00000600320 STRBPQ96SI9 672 aaKnown RBP24.08■■□□□ 1.45
SHKBP1-222ENST00000600320 DDX4Q9NQI0 724 aaKnown RBP24.08■■□□□ 1.45
SHKBP1-222ENST00000600320 CDK5RAP2Q96SN8 1893 aa24.07■■□□□ 1.44
SHKBP1-222ENST00000600320 PLCG2P16885 1265 aa24.07■■□□□ 1.44
SHKBP1-222ENST00000600320 MCMDC2Q4G0Z9 681 aa24.07■■□□□ 1.44
SHKBP1-222ENST00000600320 IDI2Q9BXS1 227 aa24.07■■□□□ 1.44
SHKBP1-222ENST00000600320 TMOD2Q9NZR1 351 aa24.07■■□□□ 1.44
SHKBP1-222ENST00000600320 FAM198AQ9UFP1 575 aa24.07■■□□□ 1.44
SHKBP1-222ENST00000600320 POLR2AP24928 1970 aaKnown RBP24.07■■□□□ 1.44
SHKBP1-222ENST00000600320 PITPNM2Q9BZ72 1349 aa24.07■■□□□ 1.44
SHKBP1-222ENST00000600320 CNTNAP1P78357 1384 aa24.06■■□□□ 1.44
SHKBP1-222ENST00000600320 CDC45O75419 566 aa24.06■■□□□ 1.44
SHKBP1-222ENST00000600320 MAP1SQ66K74 1059 aaPredicted RBP24.06■■□□□ 1.44
SHKBP1-222ENST00000600320 DLK2Q6UY11 383 aa24.06■■□□□ 1.44
SHKBP1-222ENST00000600320 TGFBRAP1Q8WUH2 860 aa24.06■■□□□ 1.44
SHKBP1-222ENST00000600320 ADM5C9JUS6 153 aa24.05■■□□□ 1.44
SHKBP1-222ENST00000600320 PICALMQ13492 652 aa24.05■■□□□ 1.44
SHKBP1-222ENST00000600320 CERS3Q8IU89 383 aa24.05■■□□□ 1.44
SHKBP1-222ENST00000600320 APOBEC3FQ8IUX4 373 aaKnown RBP24.05■■□□□ 1.44
SHKBP1-222ENST00000600320 MAPKAPK5Q8IW41 473 aa24.05■■□□□ 1.44
SHKBP1-222ENST00000600320 ZFPM1Q8IX07 1006 aa24.05■■□□□ 1.44
SHKBP1-222ENST00000600320 SDR42E1Q8WUS8 393 aa24.05■■□□□ 1.44
SHKBP1-222ENST00000600320 DCPSQ96C86 337 aaKnown RBP24.05■■□□□ 1.44
SHKBP1-222ENST00000600320 TCP10Q12799 353 aa24.04■■□□□ 1.44
SHKBP1-222ENST00000600320 FKBP1CQ5VVH2 108 aa24.04■■□□□ 1.44
SHKBP1-222ENST00000600320 GLIS2Q9BZE0 524 aaPredicted RBP24.04■■□□□ 1.44
SHKBP1-222ENST00000600320 CRNKL1Q9BZJ0 848 aaKnown RBP24.04■■□□□ 1.44
SHKBP1-222ENST00000600320 SLC4A4Q9Y6R1 1079 aa24.04■■□□□ 1.44
SHKBP1-222ENST00000600320 FOCADQ5VW36 1801 aa24.03■■□□□ 1.44
SHKBP1-222ENST00000600320 FOXP2O15409 715 aa24.03■■□□□ 1.44
SHKBP1-222ENST00000600320 RASA3Q14644 834 aa24.03■■□□□ 1.44
SHKBP1-222ENST00000600320 VPS53Q5VIR6 699 aa24.03■■□□□ 1.44
SHKBP1-222ENST00000600320 USP48Q86UV5 1035 aa24.03■■□□□ 1.44
SHKBP1-222ENST00000600320 FLT1P17948 1338 aa24.03■■□□□ 1.44
SHKBP1-222ENST00000600320 CCDC171Q6TFL3 1326 aa24.03■■□□□ 1.44
SHKBP1-222ENST00000600320 ENTPD3O75355 529 aa24.02■■□□□ 1.44
SHKBP1-222ENST00000600320 USP5P45974 858 aa24.02■■□□□ 1.44
SHKBP1-222ENST00000600320 CHADLQ6NUI6 762 aa24.02■■□□□ 1.44
SHKBP1-222ENST00000600320 KRT26Q7Z3Y9 468 aa24.02■■□□□ 1.44
SHKBP1-222ENST00000600320 CDAN1Q8IWY9 1227 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms