RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 GLRX3O76003 335 aaKnown RBP22.94■■□□□ 1.26
CCDC9-205ENST00000600117 TBC1D9Q6ZT07 1266 aa22.94■■□□□ 1.26
CCDC9-205ENST00000600117 SUGT1Q9Y2Z0 365 aa22.94■■□□□ 1.26
CCDC9-205ENST00000600117 ERC2O15083 957 aa22.93■■□□□ 1.26
CCDC9-205ENST00000600117 PRDX5P30044 214 aa22.93■■□□□ 1.26
CCDC9-205ENST00000600117 RBM26Q5T8P6 1007 aaKnown RBP22.93■■□□□ 1.26
CCDC9-205ENST00000600117 SKAP1Q86WV1 359 aa22.93■■□□□ 1.26
CCDC9-205ENST00000600117 KIAA0825Q8IV33 1275 aa22.93■■□□□ 1.26
CCDC9-205ENST00000600117 SULF1Q8IWU6 871 aa22.93■■□□□ 1.26
CCDC9-205ENST00000600117 EDC3Q96F86 508 aaKnown RBP22.93■■□□□ 1.26
CCDC9-205ENST00000600117 ANTXR1Q9H6X2 564 aa22.93■■□□□ 1.26
CCDC9-205ENST00000600117 PIH1D3Q9NQM4 214 aaKnown RBP22.93■■□□□ 1.26
CCDC9-205ENST00000600117 HPS5Q9UPZ3 1129 aa22.93■■□□□ 1.26
CCDC9-205ENST00000600117 MYO5AQ9Y4I1 1855 aaKnown RBP22.93■■□□□ 1.26
CCDC9-205ENST00000600117 DOCK2Q92608 1830 aa22.92■■□□□ 1.26
CCDC9-205ENST00000600117 PKN2Q16513 984 aaKnown RBP22.92■■□□□ 1.26
CCDC9-205ENST00000600117 ZGPATQ8N5A5 531 aaKnown RBP22.92■■□□□ 1.26
CCDC9-205ENST00000600117 DNAJC2Q99543 621 aaKnown RBP22.92■■□□□ 1.26
CCDC9-205ENST00000600117 USP17L8P0C7I0 530 aa22.91■■□□□ 1.26
CCDC9-205ENST00000600117 ZNF280AP59817 542 aaPredicted RBP22.91■■□□□ 1.26
CCDC9-205ENST00000600117 KIF4BQ2VIQ3 1234 aa22.91■■□□□ 1.26
CCDC9-205ENST00000600117 GGA3Q9NZ52 723 aa22.91■■□□□ 1.26
CCDC9-205ENST00000600117 ABCF2Q9UG63 623 aa22.91■■□□□ 1.26
CCDC9-205ENST00000600117 GTF3C3Q9Y5Q9 886 aa22.91■■□□□ 1.26
CCDC9-205ENST00000600117 F8W031 263 aaPredicted RBP22.9■■□□□ 1.26
CCDC9-205ENST00000600117 GOLIM4O00461 696 aa22.9■■□□□ 1.26
CCDC9-205ENST00000600117 LDHBP07195 334 aaKnown RBP22.9■■□□□ 1.26
CCDC9-205ENST00000600117 RASAL3Q86YV0 1011 aa22.9■■□□□ 1.26
CCDC9-205ENST00000600117 CDCA5Q96FF9 252 aa22.9■■□□□ 1.26
CCDC9-205ENST00000600117 PAG1Q9NWQ8 432 aa22.9■■□□□ 1.26
CCDC9-205ENST00000600117 TTF2Q9UNY4 1162 aaKnown RBP22.9■■□□□ 1.26
CCDC9-205ENST00000600117 MKI67P46013 3256 aaKnown RBP22.9■■□□□ 1.26
CCDC9-205ENST00000600117 SPTY2D1Q68D10 685 aaPredicted RBP22.89■■□□□ 1.25
CCDC9-205ENST00000600117 ZNF384Q8TF68 577 aa22.89■■□□□ 1.25
CCDC9-205ENST00000600117 MAST2Q6P0Q8 1798 aa22.89■■□□□ 1.25
CCDC9-205ENST00000600117 TTF1Q15361 905 aaPredicted RBP22.88■■□□□ 1.25
CCDC9-205ENST00000600117 ERICH6Q7L0X2 663 aa22.88■■□□□ 1.25
CCDC9-205ENST00000600117 PAPPA2Q9BXP8 1791 aa22.87■■□□□ 1.25
CCDC9-205ENST00000600117 MAP4K4O95819 1239 aaPredicted RBP22.87■■□□□ 1.25
CCDC9-205ENST00000600117 MMP14P50281 582 aa22.87■■□□□ 1.25
CCDC9-205ENST00000600117 FKBP1BP68106 108 aa22.87■■□□□ 1.25
CCDC9-205ENST00000600117 LRP2BPQ9P2M1 347 aa22.87■■□□□ 1.25
CCDC9-205ENST00000600117 HTTP42858 3142 aa22.86■■□□□ 1.25
CCDC9-205ENST00000600117 MAST3O60307 1309 aa22.86■■□□□ 1.25
CCDC9-205ENST00000600117 IGSF3O75054 1194 aa22.86■■□□□ 1.25
CCDC9-205ENST00000600117 HDLBPQ00341 1268 aaKnown RBP22.86■■□□□ 1.25
CCDC9-205ENST00000600117 MECOMQ03112 1051 aa22.86■■□□□ 1.25
CCDC9-205ENST00000600117 OGFOD1Q8N543 542 aa22.86■■□□□ 1.25
CCDC9-205ENST00000600117 NSUN4Q96CB9 384 aaKnown RBP22.86■■□□□ 1.25
CCDC9-205ENST00000600117 MRIQ9BWK5 157 aa22.86■■□□□ 1.25
CCDC9-205ENST00000600117 RAI14Q9P0K7 980 aa22.86■■□□□ 1.25
CCDC9-205ENST00000600117 HDAC9Q9UKV0 1011 aa22.86■■□□□ 1.25
CCDC9-205ENST00000600117 ASTN2O75129 1339 aaPredicted RBP22.85■■□□□ 1.25
CCDC9-205ENST00000600117 DIXDC1Q155Q3 683 aa22.85■■□□□ 1.25
CCDC9-205ENST00000600117 ZBED3Q96IU2 234 aaPredicted RBP22.85■■□□□ 1.25
CCDC9-205ENST00000600117 MYOZ2Q9NPC6 264 aa22.85■■□□□ 1.25
CCDC9-205ENST00000600117 SERPINA10Q9UK55 444 aa22.85■■□□□ 1.25
CCDC9-205ENST00000600117 PCDHAC2Q9Y5I4 1007 aa22.85■■□□□ 1.25
CCDC9-205ENST00000600117 IDH1O75874 414 aaKnown RBP22.84■■□□□ 1.25
CCDC9-205ENST00000600117 GSPT1P15170 499 aaKnown RBP22.84■■□□□ 1.25
CCDC9-205ENST00000600117 CRKP46108 304 aa22.84■■□□□ 1.25
CCDC9-205ENST00000600117 CFAP100Q494V2 611 aa22.84■■□□□ 1.25
CCDC9-205ENST00000600117 TTC22Q5TAA0 569 aa22.84■■□□□ 1.25
CCDC9-205ENST00000600117 DZIP1Q86YF9 867 aaKnown RBP22.84■■□□□ 1.25
CCDC9-205ENST00000600117 KBTBD3Q8NAB2 608 aa22.84■■□□□ 1.25
CCDC9-205ENST00000600117 MTMR14Q8NCE2 650 aa22.84■■□□□ 1.25
CCDC9-205ENST00000600117 ZNF296Q8WUU4 475 aaPredicted RBP22.84■■□□□ 1.25
CCDC9-205ENST00000600117 MYH2Q9UKX2 1941 aa22.84■■□□□ 1.25
CCDC9-205ENST00000600117 ANGEL2Q5VTE6 544 aaKnown RBP22.83■■□□□ 1.25
CCDC9-205ENST00000600117 HHIPL2Q6UWX4 724 aa22.83■■□□□ 1.25
CCDC9-205ENST00000600117 CENPFP49454 3210 aa22.83■■□□□ 1.24
CCDC9-205ENST00000600117 GAKO14976 1311 aa22.82■■□□□ 1.24
CCDC9-205ENST00000600117 MYH7P12883 1935 aa22.82■■□□□ 1.24
CCDC9-205ENST00000600117 RGS3P49796 1198 aa22.82■■□□□ 1.24
CCDC9-205ENST00000600117 MAP3K12Q12852 859 aa22.82■■□□□ 1.24
CCDC9-205ENST00000600117 TEKT1Q969V4 418 aa22.82■■□□□ 1.24
CCDC9-205ENST00000600117 FAM163AQ96GL9 167 aaPredicted RBP22.82■■□□□ 1.24
CCDC9-205ENST00000600117 DAGLAQ9Y4D2 1042 aa22.82■■□□□ 1.24
CCDC9-205ENST00000600117 PDE6AP16499 860 aa22.81■■□□□ 1.24
CCDC9-205ENST00000600117 NOM1Q5C9Z4 860 aaKnown RBP22.81■■□□□ 1.24
CCDC9-205ENST00000600117 EVI5LQ96CN4 794 aa22.81■■□□□ 1.24
CCDC9-205ENST00000600117 ZDHHC15Q96MV8 337 aa22.81■■□□□ 1.24
CCDC9-205ENST00000600117 MROH7-TTC4A0A0A0MT08 1334 aa22.81■■□□□ 1.24
CCDC9-205ENST00000600117 PITPNM2Q9BZ72 1349 aa22.81■■□□□ 1.24
CCDC9-205ENST00000600117 TCRBV5S4A2TA0A5A2 114 aa22.8■■□□□ 1.24
CCDC9-205ENST00000600117 SPDYE2BA6NHP3 402 aa22.8■■□□□ 1.24
CCDC9-205ENST00000600117 WNT10BO00744 389 aa22.8■■□□□ 1.24
CCDC9-205ENST00000600117 TBC1D8O95759 1140 aa22.8■■□□□ 1.24
CCDC9-205ENST00000600117 SPDYE6P0CI01 402 aa22.8■■□□□ 1.24
CCDC9-205ENST00000600117 ADD2P35612 726 aa22.8■■□□□ 1.24
CCDC9-205ENST00000600117 GSTO1P78417 241 aa22.8■■□□□ 1.24
CCDC9-205ENST00000600117 DLGAP5Q15398 846 aa22.8■■□□□ 1.24
CCDC9-205ENST00000600117 NAA16Q6N069 864 aaPredicted RBP22.8■■□□□ 1.24
CCDC9-205ENST00000600117 APOBEC3HQ6NTF7 200 aaKnown RBP22.8■■□□□ 1.24
CCDC9-205ENST00000600117 FBXO46Q6PJ61 603 aaPredicted RBP22.8■■□□□ 1.24
CCDC9-205ENST00000600117 MAGEB6Q8N7X4 407 aa22.8■■□□□ 1.24
CCDC9-205ENST00000600117 PRMT6Q96LA8 375 aaPredicted RBP22.8■■□□□ 1.24
CCDC9-205ENST00000600117 CHGBP05060 677 aa22.79■■□□□ 1.24
CCDC9-205ENST00000600117 LDHCP07864 332 aa22.79■■□□□ 1.24
CCDC9-205ENST00000600117 NBPF9Q3BBW0 867 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms