RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 ANKRD2Q9GZV1 360 aa11.24□□□□□ -0.61
VPS25-205ENST00000590339 LEMD3Q9Y2U8 911 aa11.24□□□□□ -0.61
VPS25-205ENST00000590339 COL1A1P02452 1464 aaPredicted RBP11.24□□□□□ -0.61
VPS25-205ENST00000590339 DUOX1Q9NRD9 1551 aa11.24□□□□□ -0.61
VPS25-205ENST00000590339 M0R2C6 588 aa11.23□□□□□ -0.61
VPS25-205ENST00000590339 ZBTB22O15209 634 aa11.23□□□□□ -0.61
VPS25-205ENST00000590339 HSP90AA1P07900 732 aaKnown RBP11.23□□□□□ -0.61
VPS25-205ENST00000590339 HSPA1AP0DMV8 641 aaKnown RBP11.23□□□□□ -0.61
VPS25-205ENST00000590339 HSPA1BP0DMV9 641 aaKnown RBP11.23□□□□□ -0.61
VPS25-205ENST00000590339 ZKSCAN1P17029 563 aaPredicted RBP11.23□□□□□ -0.61
VPS25-205ENST00000590339 CASTP20810 708 aaKnown RBP11.23□□□□□ -0.61
VPS25-205ENST00000590339 RPS12P25398 132 aaKnown RBP11.23□□□□□ -0.61
VPS25-205ENST00000590339 KLRK1P26718 216 aa11.23□□□□□ -0.61
VPS25-205ENST00000590339 VEGFBP49765 207 aa11.23□□□□□ -0.61
VPS25-205ENST00000590339 TTF1Q15361 905 aaPredicted RBP11.23□□□□□ -0.61
VPS25-205ENST00000590339 VPS53Q5VIR6 699 aa11.23□□□□□ -0.61
VPS25-205ENST00000590339 CST9Q5W186 159 aa11.23□□□□□ -0.61
VPS25-205ENST00000590339 RSBN1LQ6PCB5 846 aaPredicted RBP11.23□□□□□ -0.61
VPS25-205ENST00000590339 PODNQ7Z5L7 613 aa11.23□□□□□ -0.61
VPS25-205ENST00000590339 APPBP2Q92624 585 aa11.23□□□□□ -0.61
VPS25-205ENST00000590339 JAKMIP1Q96N16 626 aaKnown RBP11.23□□□□□ -0.61
VPS25-205ENST00000590339 ALDH8A1Q9H2A2 487 aaPredicted RBP11.23□□□□□ -0.61
VPS25-205ENST00000590339 CWC22Q9HCG8 908 aaKnown RBP11.23□□□□□ -0.61
VPS25-205ENST00000590339 USP17L3A6NCW0 530 aa11.22□□□□□ -0.61
VPS25-205ENST00000590339 USP17L4A6NCW7 530 aa11.22□□□□□ -0.61
VPS25-205ENST00000590339 FOXP2O15409 715 aa11.22□□□□□ -0.61
VPS25-205ENST00000590339 CELF2O95319 508 aaKnown RBP11.22□□□□□ -0.61
VPS25-205ENST00000590339 SCN4AP35499 1836 aa11.22□□□□□ -0.61
VPS25-205ENST00000590339 ADD2P35612 726 aa11.22□□□□□ -0.61
VPS25-205ENST00000590339 AK2P54819 239 aa11.22□□□□□ -0.61
VPS25-205ENST00000590339 RASGRF1Q13972 1273 aa11.22□□□□□ -0.61
VPS25-205ENST00000590339 UBE4AQ14139 1066 aa11.22□□□□□ -0.61
VPS25-205ENST00000590339 KIF4BQ2VIQ3 1234 aa11.22□□□□□ -0.61
VPS25-205ENST00000590339 SLFNL1Q499Z3 407 aa11.22□□□□□ -0.61
VPS25-205ENST00000590339 CLEC17AQ6ZS10 378 aa11.22□□□□□ -0.61
VPS25-205ENST00000590339 RUFY3Q7L099 469 aa11.22□□□□□ -0.61
VPS25-205ENST00000590339 CDC37L1Q7L3B6 337 aa11.22□□□□□ -0.61
VPS25-205ENST00000590339 USP17L1Q7RTZ2 530 aa11.22□□□□□ -0.61
VPS25-205ENST00000590339 ZC3H15Q8WU90 426 aaKnown RBP11.22□□□□□ -0.61
VPS25-205ENST00000590339 OSBP2Q969R2 916 aa11.22□□□□□ -0.61
VPS25-205ENST00000590339 PIH1D3Q9NQM4 214 aaKnown RBP11.22□□□□□ -0.61
VPS25-205ENST00000590339 PGAP2Q9UHJ9 254 aa11.22□□□□□ -0.61
VPS25-205ENST00000590339 TAF6LQ9Y6J9 622 aa11.22□□□□□ -0.61
VPS25-205ENST00000590339 CNTNAP1P78357 1384 aa11.21□□□□□ -0.61
VPS25-205ENST00000590339 IRS2Q9Y4H2 1338 aa11.21□□□□□ -0.61
VPS25-205ENST00000590339 PSMA5P28066 241 aa11.21□□□□□ -0.61
VPS25-205ENST00000590339 KRT32Q14532 448 aa11.21□□□□□ -0.61
VPS25-205ENST00000590339 UBE3CQ15386 1083 aa11.21□□□□□ -0.61
VPS25-205ENST00000590339 ZSCAN25Q6NSZ9 544 aa11.21□□□□□ -0.61
VPS25-205ENST00000590339 ZGPATQ8N5A5 531 aaKnown RBP11.21□□□□□ -0.61
VPS25-205ENST00000590339 DCPSQ96C86 337 aaKnown RBP11.21□□□□□ -0.61
VPS25-205ENST00000590339 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.21□□□□□ -0.61
VPS25-205ENST00000590339 COA1Q9GZY4 146 aa11.21□□□□□ -0.61
VPS25-205ENST00000590339 FOXD4L1Q9NU39 408 aa11.21□□□□□ -0.61
VPS25-205ENST00000590339 CYP46A1Q9Y6A2 500 aa11.21□□□□□ -0.61
VPS25-205ENST00000590339 ASTN2O75129 1339 aaPredicted RBP11.2□□□□□ -0.62
VPS25-205ENST00000590339 PDS5AQ29RF7 1337 aaKnown RBP11.2□□□□□ -0.62
VPS25-205ENST00000590339 TCRBV5S4A2TA0A5A2 114 aa11.2□□□□□ -0.62
VPS25-205ENST00000590339 CYP21A2P08686 494 aa11.2□□□□□ -0.62
VPS25-205ENST00000590339 USP17L8P0C7I0 530 aa11.2□□□□□ -0.62
VPS25-205ENST00000590339 HSPD1P10809 573 aaKnown RBP11.2□□□□□ -0.62
VPS25-205ENST00000590339 CPA1P15085 419 aa11.2□□□□□ -0.62
VPS25-205ENST00000590339 RPS6KB1P23443 525 aa11.2□□□□□ -0.62
VPS25-205ENST00000590339 MCM4P33991 863 aa11.2□□□□□ -0.62
VPS25-205ENST00000590339 GTF2IP78347 998 aa11.2□□□□□ -0.62
VPS25-205ENST00000590339 NUCB2P80303 420 aa11.2□□□□□ -0.62
VPS25-205ENST00000590339 COL9A3Q14050 684 aaPredicted RBP11.2□□□□□ -0.62
VPS25-205ENST00000590339 TTLL5Q6EMB2 1281 aa11.2□□□□□ -0.62
VPS25-205ENST00000590339 KRT26Q7Z3Y9 468 aa11.2□□□□□ -0.62
VPS25-205ENST00000590339 SPATA5Q8NB90 893 aa11.2□□□□□ -0.62
VPS25-205ENST00000590339 AGBL3Q8NEM8 1001 aa11.2□□□□□ -0.62
VPS25-205ENST00000590339 TNPO1Q92973 898 aaKnown RBP11.2□□□□□ -0.62
VPS25-205ENST00000590339 PDRG1Q9NUG6 133 aa11.2□□□□□ -0.62
VPS25-205ENST00000590339 SCAF8Q9UPN6 1271 aaKnown RBP11.2□□□□□ -0.62
VPS25-205ENST00000590339 LIMCH1Q9UPQ0 1083 aa11.2□□□□□ -0.62
VPS25-205ENST00000590339 ZMYM6O95789 1325 aa11.19□□□□□ -0.62
VPS25-205ENST00000590339 WDR33Q9C0J8 1336 aaKnown RBP11.19□□□□□ -0.62
VPS25-205ENST00000590339 RASSF10A6NK89 507 aa11.19□□□□□ -0.62
VPS25-205ENST00000590339 ADM5C9JUS6 153 aa11.19□□□□□ -0.62
VPS25-205ENST00000590339 PDE6AP16499 860 aa11.19□□□□□ -0.62
VPS25-205ENST00000590339 ST3GAL1Q11201 340 aa11.19□□□□□ -0.62
VPS25-205ENST00000590339 DACT2Q5SW24 774 aa11.19□□□□□ -0.62
VPS25-205ENST00000590339 COL13A1Q5TAT6 717 aaPredicted RBP11.19□□□□□ -0.62
VPS25-205ENST00000590339 CYP4F22Q6NT55 531 aa11.19□□□□□ -0.62
VPS25-205ENST00000590339 BLOC1S2Q6QNY1 142 aa11.19□□□□□ -0.62
VPS25-205ENST00000590339 STOX1Q6ZVD7 989 aa11.19□□□□□ -0.62
VPS25-205ENST00000590339 ZSCAN31Q96LW9 406 aaPredicted RBP11.19□□□□□ -0.62
VPS25-205ENST00000590339 CD209Q9NNX6 404 aa11.19□□□□□ -0.62
VPS25-205ENST00000590339 SH2B1Q9NRF2 756 aaPredicted RBP11.19□□□□□ -0.62
VPS25-205ENST00000590339 JAG2Q9Y219 1238 aa11.19□□□□□ -0.62
VPS25-205ENST00000590339 LAMB1P07942 1786 aa11.18□□□□□ -0.62
VPS25-205ENST00000590339 GPAA1O43292 621 aa11.18□□□□□ -0.62
VPS25-205ENST00000590339 LARGE1O95461 756 aa11.18□□□□□ -0.62
VPS25-205ENST00000590339 ZNF280AP59817 542 aaPredicted RBP11.18□□□□□ -0.62
VPS25-205ENST00000590339 STRIP1Q5VSL9 837 aa11.18□□□□□ -0.62
VPS25-205ENST00000590339 ANGEL2Q5VTE6 544 aaKnown RBP11.18□□□□□ -0.62
VPS25-205ENST00000590339 NOL8Q76FK4 1167 aaKnown RBP11.18□□□□□ -0.62
VPS25-205ENST00000590339 KIAA0825Q8IV33 1275 aa11.18□□□□□ -0.62
VPS25-205ENST00000590339 SULF1Q8IWU6 871 aa11.18□□□□□ -0.62
VPS25-205ENST00000590339 OGFOD1Q8N543 542 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms