RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 KLRG2A4D1S0 409 aaPredicted RBP8.95□□□□□ -0.98
SMAD4-210ENST00000590061 POLRMTO00411 1230 aaKnown RBP8.95□□□□□ -0.98
SMAD4-210ENST00000590061 MMP10P09238 476 aa8.95□□□□□ -0.98
SMAD4-210ENST00000590061 HOXA10P31260 410 aaPredicted RBP8.95□□□□□ -0.98
SMAD4-210ENST00000590061 QPCTQ16769 361 aa8.95□□□□□ -0.98
SMAD4-210ENST00000590061 ERFEQ4G0M1 354 aa8.95□□□□□ -0.98
SMAD4-210ENST00000590061 CC2D2BQ6DHV5 1058 aa8.95□□□□□ -0.98
SMAD4-210ENST00000590061 CASC1Q6TDU7 716 aa8.95□□□□□ -0.98
SMAD4-210ENST00000590061 CYP4X1Q8N118 509 aa8.95□□□□□ -0.98
SMAD4-210ENST00000590061 RHPN1Q8TCX5 695 aa8.95□□□□□ -0.98
SMAD4-210ENST00000590061 CRAMP1Q96RY5 1269 aa8.95□□□□□ -0.98
SMAD4-210ENST00000590061 BSDC1Q9NW68 430 aaPredicted RBP8.95□□□□□ -0.98
SMAD4-210ENST00000590061 TTC41PQ6P2S7 1318 aa8.95□□□□□ -0.98
SMAD4-210ENST00000590061 H0YIN7 160 aa8.94□□□□□ -0.98
SMAD4-210ENST00000590061 ST8SIA5O15466 376 aa8.94□□□□□ -0.98
SMAD4-210ENST00000590061 LILRB3O75022 631 aa8.94□□□□□ -0.98
SMAD4-210ENST00000590061 HCLS1P14317 486 aaPredicted RBP8.94□□□□□ -0.98
SMAD4-210ENST00000590061 NPR1P16066 1061 aa8.94□□□□□ -0.98
SMAD4-210ENST00000590061 SMPD1P17405 629 aa8.94□□□□□ -0.98
SMAD4-210ENST00000590061 RPS8P62241 208 aaKnown RBP8.94□□□□□ -0.98
SMAD4-210ENST00000590061 PTPN12Q05209 780 aaKnown RBP8.94□□□□□ -0.98
SMAD4-210ENST00000590061 CRY2Q49AN0 593 aa8.94□□□□□ -0.98
SMAD4-210ENST00000590061 RTL5Q5HYW3 569 aaPredicted RBP8.94□□□□□ -0.98
SMAD4-210ENST00000590061 SOGA3Q5TF21 947 aa8.94□□□□□ -0.98
SMAD4-210ENST00000590061 PRR5LQ6MZQ0 368 aa8.94□□□□□ -0.98
SMAD4-210ENST00000590061 TMED8Q6PL24 325 aaPredicted RBP8.94□□□□□ -0.98
SMAD4-210ENST00000590061 LYPD8Q6UX82 237 aa8.94□□□□□ -0.98
SMAD4-210ENST00000590061 CNKSR1Q969H4 720 aa8.94□□□□□ -0.98
SMAD4-210ENST00000590061 OSBPL3Q9H4L5 887 aa8.94□□□□□ -0.98
SMAD4-210ENST00000590061 AAASQ9NRG9 546 aa8.94□□□□□ -0.98
SMAD4-210ENST00000590061 C4AP0C0L4 1744 aa8.94□□□□□ -0.98
SMAD4-210ENST00000590061 COL24A1Q17RW2 1714 aa8.94□□□□□ -0.98
SMAD4-210ENST00000590061 FAM177BA6PVY3 158 aa8.93□□□□□ -0.98
SMAD4-210ENST00000590061 GLRX3O76003 335 aaKnown RBP8.93□□□□□ -0.98
SMAD4-210ENST00000590061 F12P00748 615 aaPredicted RBP8.93□□□□□ -0.98
SMAD4-210ENST00000590061 RFX5P48382 616 aaPredicted RBP8.93□□□□□ -0.98
SMAD4-210ENST00000590061 KCNH2Q12809 1159 aa8.93□□□□□ -0.98
SMAD4-210ENST00000590061 METTL24Q5JXM2 366 aa8.93□□□□□ -0.98
SMAD4-210ENST00000590061 CCDC158Q5M9N0 1113 aa8.93□□□□□ -0.98
SMAD4-210ENST00000590061 GORABQ5T7V8 394 aa8.93□□□□□ -0.98
SMAD4-210ENST00000590061 STYK1Q6J9G0 422 aa8.93□□□□□ -0.98
SMAD4-210ENST00000590061 SNIP1Q8TAD8 396 aaKnown RBP8.93□□□□□ -0.98
SMAD4-210ENST00000590061 MASTLQ96GX5 879 aa8.93□□□□□ -0.98
SMAD4-210ENST00000590061 UNC93B1Q9H1C4 597 aa8.93□□□□□ -0.98
SMAD4-210ENST00000590061 GREM2Q9H772 168 aa8.93□□□□□ -0.98
SMAD4-210ENST00000590061 GPBP1L1Q9HC44 474 aaPredicted RBP8.93□□□□□ -0.98
SMAD4-210ENST00000590061 GNL3LQ9NVN8 582 aaKnown RBP8.93□□□□□ -0.98
SMAD4-210ENST00000590061 STAP2Q9UGK3 403 aa8.93□□□□□ -0.98
SMAD4-210ENST00000590061 EXOC6BQ9Y2D4 811 aa8.93□□□□□ -0.98
SMAD4-210ENST00000590061 LAMB2P55268 1798 aa8.92□□□□□ -0.98
SMAD4-210ENST00000590061 ABCC12Q96J65 1359 aa8.92□□□□□ -0.98
SMAD4-210ENST00000590061 HIP1O00291 1037 aa8.92□□□□□ -0.98
SMAD4-210ENST00000590061 HMGB1P09429 215 aaKnown RBP8.92□□□□□ -0.98
SMAD4-210ENST00000590061 IFIT1P09914 478 aaKnown RBP8.92□□□□□ -0.98
SMAD4-210ENST00000590061 SLC5A1P13866 664 aa8.92□□□□□ -0.98
SMAD4-210ENST00000590061 MX1P20591 662 aa8.92□□□□□ -0.98
SMAD4-210ENST00000590061 TGFB2P61812 414 aa8.92□□□□□ -0.98
SMAD4-210ENST00000590061 GRAPQ13588 217 aa8.92□□□□□ -0.98
SMAD4-210ENST00000590061 PUM3Q15397 648 aaKnown RBP8.92□□□□□ -0.98
SMAD4-210ENST00000590061 BMP2KLQ5H9B9 411 aa8.92□□□□□ -0.98
SMAD4-210ENST00000590061 EPHA10Q5JZY3 1008 aa8.92□□□□□ -0.98
SMAD4-210ENST00000590061 GRAPLQ8TC17 118 aaPredicted RBP8.92□□□□□ -0.98
SMAD4-210ENST00000590061 LPIN2Q92539 896 aa8.92□□□□□ -0.98
SMAD4-210ENST00000590061 LNPKQ9C0E8 428 aa8.92□□□□□ -0.98
SMAD4-210ENST00000590061 KDM4CQ9H3R0 1056 aa8.92□□□□□ -0.98
SMAD4-210ENST00000590061 ECHDC1Q9NTX5 307 aa8.92□□□□□ -0.98
SMAD4-210ENST00000590061 SIAH2O43255 324 aa8.91□□□□□ -0.98
SMAD4-210ENST00000590061 PDE8BO95263 885 aa8.91□□□□□ -0.98
SMAD4-210ENST00000590061 UQCRFS1P1P0C7P4 283 aa8.91□□□□□ -0.98
SMAD4-210ENST00000590061 KCNJ4P48050 445 aa8.91□□□□□ -0.98
SMAD4-210ENST00000590061 CLK2P49760 499 aaKnown RBP8.91□□□□□ -0.98
SMAD4-210ENST00000590061 SMCPP49901 116 aaPredicted RBP8.91□□□□□ -0.98
SMAD4-210ENST00000590061 SH3BP2P78314 561 aa8.91□□□□□ -0.98
SMAD4-210ENST00000590061 UBE4AQ14139 1066 aa8.91□□□□□ -0.98
SMAD4-210ENST00000590061 CAVIN4Q5BKX8 364 aa8.91□□□□□ -0.98
SMAD4-210ENST00000590061 AACSQ86V21 672 aa8.91□□□□□ -0.98
SMAD4-210ENST00000590061 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.91□□□□□ -0.98
SMAD4-210ENST00000590061 LEMD3Q9Y2U8 911 aa8.91□□□□□ -0.98
SMAD4-210ENST00000590061 RIPOR2Q9Y4F9 1068 aa8.91□□□□□ -0.98
SMAD4-210ENST00000590061 CD2APQ9Y5K6 639 aa8.91□□□□□ -0.98
SMAD4-210ENST00000590061 J3QL48 77 aa8.9□□□□□ -0.98
SMAD4-210ENST00000590061 APBB1O00213 710 aa8.9□□□□□ -0.98
SMAD4-210ENST00000590061 DDR1Q08345 913 aa8.9□□□□□ -0.98
SMAD4-210ENST00000590061 ATP2B3Q16720 1220 aa8.9□□□□□ -0.98
SMAD4-210ENST00000590061 CSPP1Q1MSJ5 1256 aa8.9□□□□□ -0.98
SMAD4-210ENST00000590061 TNNI3KQ59H18 835 aa8.9□□□□□ -0.98
SMAD4-210ENST00000590061 AMIGO3Q86WK7 504 aa8.9□□□□□ -0.98
SMAD4-210ENST00000590061 SUPT20HQ8NEM7 779 aa8.9□□□□□ -0.98
SMAD4-210ENST00000590061 IL27Q8NEV9 243 aa8.9□□□□□ -0.98
SMAD4-210ENST00000590061 JARID2Q92833 1246 aaPredicted RBP8.9□□□□□ -0.98
SMAD4-210ENST00000590061 ZNF512BQ96KM6 892 aaPredicted RBP8.9□□□□□ -0.98
SMAD4-210ENST00000590061 SIL1Q9H173 461 aa8.9□□□□□ -0.98
SMAD4-210ENST00000590061 UPF2Q9HAU5 1272 aaKnown RBP8.9□□□□□ -0.98
SMAD4-210ENST00000590061 SPON1Q9HCB6 807 aa8.9□□□□□ -0.98
SMAD4-210ENST00000590061 FPGT-TNNI3KV9GXZ4 949 aa8.9□□□□□ -0.98
SMAD4-210ENST00000590061 XDHP47989 1333 aa8.89□□□□□ -0.99
SMAD4-210ENST00000590061 TTC24A2A3L6 582 aaPredicted RBP8.89□□□□□ -0.99
SMAD4-210ENST00000590061 POTECB2RU33 542 aa8.89□□□□□ -0.99
SMAD4-210ENST00000590061 SRGNP10124 158 aa8.89□□□□□ -0.99
SMAD4-210ENST00000590061 ATP5JP18859 108 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms