RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 CNPY2Q9Y2B0 182 aa12.18□□□□□ -0.46
VPS25-203ENST00000589520 CHD4Q14839 1912 aa12.17□□□□□ -0.46
VPS25-203ENST00000589520 DOCK2Q92608 1830 aa12.17□□□□□ -0.46
VPS25-203ENST00000589520 KLF18A0A0U1RQI7 1052 aa12.17□□□□□ -0.46
VPS25-203ENST00000589520 ERICH2A1L162 156 aa12.17□□□□□ -0.46
VPS25-203ENST00000589520 LDHCP07864 332 aa12.17□□□□□ -0.46
VPS25-203ENST00000589520 SLC3A2P08195 630 aaKnown RBP12.17□□□□□ -0.46
VPS25-203ENST00000589520 ANTXR2P58335 489 aa12.17□□□□□ -0.46
VPS25-203ENST00000589520 DNM1Q05193 864 aaKnown RBP12.17□□□□□ -0.46
VPS25-203ENST00000589520 LCORLQ8N3X6 602 aa12.17□□□□□ -0.46
VPS25-203ENST00000589520 NSUN4Q96CB9 384 aaKnown RBP12.17□□□□□ -0.46
VPS25-203ENST00000589520 ATP8A2Q9NTI2 1148 aa12.17□□□□□ -0.46
VPS25-203ENST00000589520 PODXL2Q9NZ53 605 aa12.17□□□□□ -0.46
VPS25-203ENST00000589520 CCDC196A0A1B0GTZ2 297 aa12.16□□□□□ -0.46
VPS25-203ENST00000589520 GOLGA6L4A6NEF3 574 aa12.16□□□□□ -0.46
VPS25-203ENST00000589520 JAK2O60674 1132 aa12.16□□□□□ -0.46
VPS25-203ENST00000589520 CTDNEP1O95476 244 aa12.16□□□□□ -0.46
VPS25-203ENST00000589520 CCT2P78371 535 aaKnown RBP12.16□□□□□ -0.46
VPS25-203ENST00000589520 PPARAQ07869 468 aa12.16□□□□□ -0.46
VPS25-203ENST00000589520 CCDC183Q5T5S1 534 aa12.16□□□□□ -0.46
VPS25-203ENST00000589520 CDC37L1Q7L3B6 337 aa12.16□□□□□ -0.46
VPS25-203ENST00000589520 AMIGO3Q86WK7 504 aa12.16□□□□□ -0.46
VPS25-203ENST00000589520 TBC1D10CQ8IV04 446 aa12.16□□□□□ -0.46
VPS25-203ENST00000589520 TDRD7Q8NHU6 1098 aaKnown RBP12.16□□□□□ -0.46
VPS25-203ENST00000589520 IGDCC4Q8TDY8 1250 aa12.16□□□□□ -0.46
VPS25-203ENST00000589520 WASF1Q92558 559 aa12.16□□□□□ -0.46
VPS25-203ENST00000589520 ESR2Q92731 530 aa12.16□□□□□ -0.46
VPS25-203ENST00000589520 RIOK1Q9BRS2 568 aaKnown RBP12.16□□□□□ -0.46
VPS25-203ENST00000589520 CRNKL1Q9BZJ0 848 aaKnown RBP12.16□□□□□ -0.46
VPS25-203ENST00000589520 EPB41L4AQ9HCS5 686 aaPredicted RBP12.16□□□□□ -0.46
VPS25-203ENST00000589520 NAP1L2Q9ULW6 460 aaPredicted RBP12.16□□□□□ -0.46
VPS25-203ENST00000589520 UTRNP46939 3433 aa12.15□□□□□ -0.46
VPS25-203ENST00000589520 IRS2Q9Y4H2 1338 aa12.15□□□□□ -0.46
VPS25-203ENST00000589520 A0A0G2JLW4 131 aa12.15□□□□□ -0.46
VPS25-203ENST00000589520 CCDC69A6NI79 296 aa12.15□□□□□ -0.46
VPS25-203ENST00000589520 GOLGA8BA8MQT2 603 aa12.15□□□□□ -0.46
VPS25-203ENST00000589520 ZBTB43O43298 467 aa12.15□□□□□ -0.46
VPS25-203ENST00000589520 FGRP09769 529 aa12.15□□□□□ -0.46
VPS25-203ENST00000589520 METAP2P50579 478 aaKnown RBP eCLIP12.15□□□□□ -0.46
VPS25-203ENST00000589520 RESTQ13127 1097 aa12.15□□□□□ -0.46
VPS25-203ENST00000589520 TMEM67Q5HYA8 995 aa12.15□□□□□ -0.46
VPS25-203ENST00000589520 SMIM5Q71RC9 77 aa12.15□□□□□ -0.46
VPS25-203ENST00000589520 CHST3Q7LGC8 479 aa12.15□□□□□ -0.46
VPS25-203ENST00000589520 SLF2Q8IX21 1173 aa12.15□□□□□ -0.46
VPS25-203ENST00000589520 NBPF3Q9H094 633 aa12.15□□□□□ -0.46
VPS25-203ENST00000589520 TMEM63CQ9P1W3 806 aa12.15□□□□□ -0.46
VPS25-203ENST00000589520 BRPF3Q9ULD4 1205 aa12.15□□□□□ -0.46
VPS25-203ENST00000589520 SLC12A7Q9Y666 1083 aa12.15□□□□□ -0.46
VPS25-203ENST00000589520 B4E1Z4 1266 aa12.14□□□□□ -0.47
VPS25-203ENST00000589520 POLRMTO00411 1230 aaKnown RBP12.14□□□□□ -0.47
VPS25-203ENST00000589520 IFIT3O14879 490 aaKnown RBP12.14□□□□□ -0.47
VPS25-203ENST00000589520 FIBPO43427 364 aa12.14□□□□□ -0.47
VPS25-203ENST00000589520 BAG3O95817 575 aa12.14□□□□□ -0.47
VPS25-203ENST00000589520 ALDH1B1P30837 517 aa12.14□□□□□ -0.47
VPS25-203ENST00000589520 SBK1Q52WX2 424 aa12.14□□□□□ -0.47
VPS25-203ENST00000589520 CCDC178Q5BJE1 867 aa12.14□□□□□ -0.47
VPS25-203ENST00000589520 NFXL1Q6ZNB6 911 aa12.14□□□□□ -0.47
VPS25-203ENST00000589520 CYB5R4Q7L1T6 521 aa12.14□□□□□ -0.47
VPS25-203ENST00000589520 BRAPQ7Z569 592 aa12.14□□□□□ -0.47
VPS25-203ENST00000589520 GAS2L3Q86XJ1 694 aa12.14□□□□□ -0.47
VPS25-203ENST00000589520 SP8Q8IXZ3 490 aa12.14□□□□□ -0.47
VPS25-203ENST00000589520 MIGA1Q8NAN2 632 aa12.14□□□□□ -0.47
VPS25-203ENST00000589520 DDX11Q96FC9 970 aa12.14□□□□□ -0.47
VPS25-203ENST00000589520 SPATA32Q96LK8 384 aa12.14□□□□□ -0.47
VPS25-203ENST00000589520 TFCP2L1Q9NZI6 479 aa12.14□□□□□ -0.47
VPS25-203ENST00000589520 ZSWIM5Q9P217 1185 aa12.14□□□□□ -0.47
VPS25-203ENST00000589520 GGA1Q9UJY5 639 aa12.14□□□□□ -0.47
VPS25-203ENST00000589520 HPS5Q9UPZ3 1129 aa12.14□□□□□ -0.47
VPS25-203ENST00000589520 NID2Q14112 1375 aa12.14□□□□□ -0.47
VPS25-203ENST00000589520 STK36Q9NRP7 1315 aa12.13□□□□□ -0.47
VPS25-203ENST00000589520 PRKAB2O43741 272 aa12.13□□□□□ -0.47
VPS25-203ENST00000589520 KDM4AO75164 1064 aa12.13□□□□□ -0.47
VPS25-203ENST00000589520 GADD45BO75293 160 aaPredicted RBP12.13□□□□□ -0.47
VPS25-203ENST00000589520 PDE6BP35913 854 aa12.13□□□□□ -0.47
VPS25-203ENST00000589520 PPP4CP60510 307 aa12.13□□□□□ -0.47
VPS25-203ENST00000589520 MECOMQ03112 1051 aa12.13□□□□□ -0.47
VPS25-203ENST00000589520 FOXD4L6Q3SYB3 417 aaPredicted RBP12.13□□□□□ -0.47
VPS25-203ENST00000589520 APOA5Q6Q788 366 aa12.13□□□□□ -0.47
VPS25-203ENST00000589520 FOXD4L3Q6VB84 417 aaPredicted RBP12.13□□□□□ -0.47
VPS25-203ENST00000589520 DZIP1Q86YF9 867 aaKnown RBP12.13□□□□□ -0.47
VPS25-203ENST00000589520 PROM2Q8N271 834 aa12.13□□□□□ -0.47
VPS25-203ENST00000589520 FBXO18Q8NFZ0 1043 aa12.13□□□□□ -0.47
VPS25-203ENST00000589520 TBC1D22AQ8WUA7 517 aa12.13□□□□□ -0.47
VPS25-203ENST00000589520 AKT1S1Q96B36 256 aa12.13□□□□□ -0.47
VPS25-203ENST00000589520 C8orf76Q96K31 380 aa12.13□□□□□ -0.47
VPS25-203ENST00000589520 NOL10Q9BSC4 688 aaKnown RBP12.13□□□□□ -0.47
VPS25-203ENST00000589520 TMX4Q9H1E5 349 aaPredicted RBP12.13□□□□□ -0.47
VPS25-203ENST00000589520 LY9Q9HBG7 655 aa12.13□□□□□ -0.47
VPS25-203ENST00000589520 ORC3Q9UBD5 711 aaPredicted RBP12.13□□□□□ -0.47
VPS25-203ENST00000589520 ARPP21Q9UBL0 812 aaPredicted RBP12.13□□□□□ -0.47
VPS25-203ENST00000589520 RCOR1Q9UKL0 485 aa12.13□□□□□ -0.47
VPS25-203ENST00000589520 IQSEC3Q9UPP2 1182 aaPredicted RBP12.13□□□□□ -0.47
VPS25-203ENST00000589520 C4AP0C0L4 1744 aa12.13□□□□□ -0.47
VPS25-203ENST00000589520 NEDD4P46934 1319 aa12.12□□□□□ -0.47
VPS25-203ENST00000589520 TNS1Q9HBL0 1735 aaKnown RBP12.12□□□□□ -0.47
VPS25-203ENST00000589520 APBA3O96018 575 aa12.12□□□□□ -0.47
VPS25-203ENST00000589520 LDHBP07195 334 aaKnown RBP12.12□□□□□ -0.47
VPS25-203ENST00000589520 CALM1P0DP23 149 aa12.12□□□□□ -0.47
VPS25-203ENST00000589520 CALM2P0DP24 149 aa12.12□□□□□ -0.47
VPS25-203ENST00000589520 CALM3P0DP25 149 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms