RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 IFT43Q96FT9 208 aa6.59□□□□□ -1.35
LINC01538-201ENST00000588074 CCDC113Q9H0I3 377 aa6.59□□□□□ -1.35
LINC01538-201ENST00000588074 MAPK8IP1Q9UQF2 711 aa6.59□□□□□ -1.35
LINC01538-201ENST00000588074 TLR6Q9Y2C9 796 aa6.59□□□□□ -1.35
LINC01538-201ENST00000588074 USP20Q9Y2K6 914 aa6.59□□□□□ -1.35
LINC01538-201ENST00000588074 FRMD4BQ9Y2L6 1034 aa6.59□□□□□ -1.35
LINC01538-201ENST00000588074 PTCH2Q9Y6C5 1203 aa6.59□□□□□ -1.35
LINC01538-201ENST00000588074 MYOM3Q5VTT5 1437 aa6.59□□□□□ -1.36
LINC01538-201ENST00000588074 NCOA2Q15596 1464 aa6.59□□□□□ -1.36
LINC01538-201ENST00000588074 EML1O00423 815 aa6.58□□□□□ -1.36
LINC01538-201ENST00000588074 PDPK1O15530 556 aa6.58□□□□□ -1.36
LINC01538-201ENST00000588074 TNFRSF21O75509 655 aa6.58□□□□□ -1.36
LINC01538-201ENST00000588074 MAGEA9P43362 315 aa6.58□□□□□ -1.36
LINC01538-201ENST00000588074 RWDD2BP57060 319 aa6.58□□□□□ -1.36
LINC01538-201ENST00000588074 ZNF445P59923 1031 aa6.58□□□□□ -1.36
LINC01538-201ENST00000588074 PCNX4Q63HM2 1172 aa6.58□□□□□ -1.36
LINC01538-201ENST00000588074 CCSAPQ6IQ19 270 aaPredicted RBP6.58□□□□□ -1.36
LINC01538-201ENST00000588074 C10orf67Q8IYJ2 551 aa6.58□□□□□ -1.36
LINC01538-201ENST00000588074 KLRG1Q96E93 195 aa6.58□□□□□ -1.36
LINC01538-201ENST00000588074 ZNF512BQ96KM6 892 aaPredicted RBP6.58□□□□□ -1.36
LINC01538-201ENST00000588074 GBP4Q96PP9 640 aa6.58□□□□□ -1.36
LINC01538-201ENST00000588074 VEZTQ9HBM0 779 aa6.58□□□□□ -1.36
LINC01538-201ENST00000588074 ARNT2Q9HBZ2 717 aa6.58□□□□□ -1.36
LINC01538-201ENST00000588074 SPTLC3Q9NUV7 552 aa6.58□□□□□ -1.36
LINC01538-201ENST00000588074 ZNF446Q9NWS9 450 aa6.58□□□□□ -1.36
LINC01538-201ENST00000588074 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.58□□□□□ -1.36
LINC01538-201ENST00000588074 SUN2Q9UH99 717 aa6.58□□□□□ -1.36
LINC01538-201ENST00000588074 BCS1LQ9Y276 419 aa6.58□□□□□ -1.36
LINC01538-201ENST00000588074 COMMD10Q9Y6G5 202 aa6.58□□□□□ -1.36
LINC01538-201ENST00000588074 ARHGAP31Q2M1Z3 1444 aa6.58□□□□□ -1.36
LINC01538-201ENST00000588074 KIF4AO95239 1232 aa6.58□□□□□ -1.36
LINC01538-201ENST00000588074 SART3Q15020 963 aaKnown RBP6.58□□□□□ -1.36
LINC01538-201ENST00000588074 C2orf27AQ580R0 203 aa6.58□□□□□ -1.36
LINC01538-201ENST00000588074 KRBA2Q6ZNG9 492 aa6.58□□□□□ -1.36
LINC01538-201ENST00000588074 GET4Q7L5D6 327 aaPredicted RBP6.58□□□□□ -1.36
LINC01538-201ENST00000588074 TRIM74Q86UV6 250 aa6.58□□□□□ -1.36
LINC01538-201ENST00000588074 TRIM73Q86UV7 250 aa6.58□□□□□ -1.36
LINC01538-201ENST00000588074 ZNF396Q96N95 335 aaPredicted RBP6.58□□□□□ -1.36
LINC01538-201ENST00000588074 SH3GL3Q99963 347 aa6.58□□□□□ -1.36
LINC01538-201ENST00000588074 MMTAG2Q9BU76 263 aaKnown RBP6.58□□□□□ -1.36
LINC01538-201ENST00000588074 VPS9D1Q9Y2B5 631 aa6.58□□□□□ -1.36
LINC01538-201ENST00000588074 SPAG9O60271 1321 aaKnown RBP6.58□□□□□ -1.36
LINC01538-201ENST00000588074 USP19O94966 1318 aa6.58□□□□□ -1.36
LINC01538-201ENST00000588074 PLEKHG2Q9H7P9 1386 aa6.58□□□□□ -1.36
LINC01538-201ENST00000588074 FAM163BP0C2L3 166 aa6.57□□□□□ -1.36
LINC01538-201ENST00000588074 ICA1Q05084 483 aa6.57□□□□□ -1.36
LINC01538-201ENST00000588074 MCL1Q07820 350 aa6.57□□□□□ -1.36
LINC01538-201ENST00000588074 MTFR1Q15390 333 aa6.57□□□□□ -1.36
LINC01538-201ENST00000588074 C10orf62Q5T681 223 aaPredicted RBP6.57□□□□□ -1.36
LINC01538-201ENST00000588074 KANK3Q6NY19 840 aa6.57□□□□□ -1.36
LINC01538-201ENST00000588074 POTEAQ6S8J7 498 aa6.57□□□□□ -1.36
LINC01538-201ENST00000588074 SYT10Q6XYQ8 523 aa6.57□□□□□ -1.36
LINC01538-201ENST00000588074 MMS22LQ6ZRQ5 1243 aa6.57□□□□□ -1.36
LINC01538-201ENST00000588074 PODNQ7Z5L7 613 aa6.57□□□□□ -1.36
LINC01538-201ENST00000588074 SRLQ86TD4 932 aa6.57□□□□□ -1.36
LINC01538-201ENST00000588074 RSRP1Q9BUV0 290 aa6.57□□□□□ -1.36
LINC01538-201ENST00000588074 TNKS2Q9H2K2 1166 aa6.57□□□□□ -1.36
LINC01538-201ENST00000588074 ZNF232Q9UNY5 417 aa6.57□□□□□ -1.36
LINC01538-201ENST00000588074 KDM2BQ8NHM5 1336 aa6.57□□□□□ -1.36
LINC01538-201ENST00000588074 ERICH3Q5RHP9 1530 aa6.57□□□□□ -1.36
LINC01538-201ENST00000588074 HAX1O00165 279 aa6.57□□□□□ -1.36
LINC01538-201ENST00000588074 CPP00450 1065 aa6.57□□□□□ -1.36
LINC01538-201ENST00000588074 TPM1P09493 284 aa6.57□□□□□ -1.36
LINC01538-201ENST00000588074 GARTP22102 1010 aa6.57□□□□□ -1.36
LINC01538-201ENST00000588074 NAP1L1P55209 391 aaKnown RBP6.57□□□□□ -1.36
LINC01538-201ENST00000588074 IFRD2Q12894 506 aaPredicted RBP6.57□□□□□ -1.36
LINC01538-201ENST00000588074 TEX35Q5T0J7 233 aa6.57□□□□□ -1.36
LINC01538-201ENST00000588074 EFCAB13Q8IY85 973 aa6.57□□□□□ -1.36
LINC01538-201ENST00000588074 DCBLD2Q96PD2 775 aa6.57□□□□□ -1.36
LINC01538-201ENST00000588074 LZTS2Q9BRK4 669 aa6.57□□□□□ -1.36
LINC01538-201ENST00000588074 SRRTQ9BXP5 876 aaKnown RBP6.57□□□□□ -1.36
LINC01538-201ENST00000588074 CWC25Q9NXE8 425 aaPredicted RBP6.57□□□□□ -1.36
LINC01538-201ENST00000588074 STRIP2Q9ULQ0 834 aa6.57□□□□□ -1.36
LINC01538-201ENST00000588074 CNTLNQ9NXG0 1405 aa6.56□□□□□ -1.36
LINC01538-201ENST00000588074 PES1O00541 588 aaKnown RBP6.56□□□□□ -1.36
LINC01538-201ENST00000588074 IRS4O14654 1257 aaPredicted RBP6.56□□□□□ -1.36
LINC01538-201ENST00000588074 PEX19P40855 299 aa6.56□□□□□ -1.36
LINC01538-201ENST00000588074 SMTNP53814 917 aa6.56□□□□□ -1.36
LINC01538-201ENST00000588074 NEXNQ0ZGT2 675 aa6.56□□□□□ -1.36
LINC01538-201ENST00000588074 CCDC30Q5VVM6 783 aa6.56□□□□□ -1.36
LINC01538-201ENST00000588074 ZKSCAN2Q63HK3 967 aa6.56□□□□□ -1.36
LINC01538-201ENST00000588074 C3orf58Q8NDZ4 430 aa6.56□□□□□ -1.36
LINC01538-201ENST00000588074 CCDC26Q8TAB7 109 aa6.56□□□□□ -1.36
LINC01538-201ENST00000588074 PPM1EQ8WY54 764 aa6.56□□□□□ -1.36
LINC01538-201ENST00000588074 PLD4Q96BZ4 506 aa6.56□□□□□ -1.36
LINC01538-201ENST00000588074 FAXDC2Q96IV6 333 aa6.56□□□□□ -1.36
LINC01538-201ENST00000588074 TMEM74Q96NL1 305 aa6.56□□□□□ -1.36
LINC01538-201ENST00000588074 CPSF2Q9P2I0 782 aaKnown RBP6.56□□□□□ -1.36
LINC01538-201ENST00000588074 ABCF2Q9UG63 623 aa6.56□□□□□ -1.36
LINC01538-201ENST00000588074 NLRP1Q9C000 1473 aa6.56□□□□□ -1.36
LINC01538-201ENST00000588074 SMC2O95347 1197 aa6.56□□□□□ -1.36
LINC01538-201ENST00000588074 BPNT1O95861 308 aa6.56□□□□□ -1.36
LINC01538-201ENST00000588074 RASGRF1Q13972 1273 aa6.56□□□□□ -1.36
LINC01538-201ENST00000588074 TTLL5Q6EMB2 1281 aa6.56□□□□□ -1.36
LINC01538-201ENST00000588074 IQUBQ8NA54 791 aa6.56□□□□□ -1.36
LINC01538-201ENST00000588074 LSM14AQ8ND56 463 aaKnown RBP6.56□□□□□ -1.36
LINC01538-201ENST00000588074 KIF1BPQ96EK5 621 aa6.56□□□□□ -1.36
LINC01538-201ENST00000588074 LRCH3Q96II8 777 aa6.56□□□□□ -1.36
LINC01538-201ENST00000588074 RHOVQ96L33 236 aa6.56□□□□□ -1.36
LINC01538-201ENST00000588074 NOC4LQ9BVI4 516 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms