RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 SURF6O75683 361 aaKnown RBP16.2■□□□□ 0.18
ERBB2-220ENST00000584684 UQCRFS1P1P0C7P4 283 aa16.2■□□□□ 0.18
ERBB2-220ENST00000584684 OS9Q13438 667 aaPredicted RBP16.2■□□□□ 0.18
ERBB2-220ENST00000584684 GORABQ5T7V8 394 aa16.2■□□□□ 0.18
ERBB2-220ENST00000584684 CDC42EP5Q6NZY7 148 aa16.2■□□□□ 0.18
ERBB2-220ENST00000584684 SLF2Q8IX21 1173 aa16.2■□□□□ 0.18
ERBB2-220ENST00000584684 SPATA5Q8NB90 893 aa16.2■□□□□ 0.18
ERBB2-220ENST00000584684 SLC10A4Q96EP9 437 aa16.2■□□□□ 0.18
ERBB2-220ENST00000584684 FAM163AQ96GL9 167 aaPredicted RBP16.2■□□□□ 0.18
ERBB2-220ENST00000584684 WNK4Q96J92 1243 aa16.2■□□□□ 0.18
ERBB2-220ENST00000584684 CLMNQ96JQ2 1002 aa16.2■□□□□ 0.18
ERBB2-220ENST00000584684 ZNF512BQ96KM6 892 aaPredicted RBP16.2■□□□□ 0.18
ERBB2-220ENST00000584684 CFHR5Q9BXR6 569 aa16.2■□□□□ 0.18
ERBB2-220ENST00000584684 HMG20BQ9P0W2 317 aa16.2■□□□□ 0.18
ERBB2-220ENST00000584684 TRPA1O75762 1119 aa16.19■□□□□ 0.18
ERBB2-220ENST00000584684 DZIP1Q86YF9 867 aaKnown RBP16.19■□□□□ 0.18
ERBB2-220ENST00000584684 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.19■□□□□ 0.18
ERBB2-220ENST00000584684 FAM151AQ8WW52 585 aa16.19■□□□□ 0.18
ERBB2-220ENST00000584684 CHMP4BQ9H444 224 aaKnown RBP16.19■□□□□ 0.18
ERBB2-220ENST00000584684 ZBTB40Q9NUA8 1239 aa16.19■□□□□ 0.18
ERBB2-220ENST00000584684 MANSC4A6NHS7 340 aaPredicted RBP16.18■□□□□ 0.18
ERBB2-220ENST00000584684 IGSF3O75054 1194 aa16.18■□□□□ 0.18
ERBB2-220ENST00000584684 MCAMP43121 646 aa16.18■□□□□ 0.18
ERBB2-220ENST00000584684 INHBEP58166 350 aa16.18■□□□□ 0.18
ERBB2-220ENST00000584684 PDE3AQ14432 1141 aa16.18■□□□□ 0.18
ERBB2-220ENST00000584684 NOM1Q5C9Z4 860 aaKnown RBP16.18■□□□□ 0.18
ERBB2-220ENST00000584684 ERC1Q8IUD2 1116 aa16.18■□□□□ 0.18
ERBB2-220ENST00000584684 ABCF2Q9UG63 623 aa16.18■□□□□ 0.18
ERBB2-220ENST00000584684 MROH7-TTC4A0A0A0MT08 1334 aa16.18■□□□□ 0.18
ERBB2-220ENST00000584684 MECOMQ03112 1051 aa16.17■□□□□ 0.18
ERBB2-220ENST00000584684 DCAF15Q66K64 600 aa16.17■□□□□ 0.18
ERBB2-220ENST00000584684 PI16Q6UXB8 463 aa16.17■□□□□ 0.18
ERBB2-220ENST00000584684 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.17■□□□□ 0.18
ERBB2-220ENST00000584684 ERICH6Q7L0X2 663 aa16.17■□□□□ 0.18
ERBB2-220ENST00000584684 RPAP2Q8IXW5 612 aaPredicted RBP16.17■□□□□ 0.18
ERBB2-220ENST00000584684 DBNDD2Q9BQY9 259 aa16.17■□□□□ 0.18
ERBB2-220ENST00000584684 IDI2Q9BXS1 227 aa16.17■□□□□ 0.18
ERBB2-220ENST00000584684 COG6Q9Y2V7 657 aa16.17■□□□□ 0.18
ERBB2-220ENST00000584684 COL2A1P02458 1487 aaPredicted RBP16.16■□□□□ 0.18
ERBB2-220ENST00000584684 ATRNL1Q5VV63 1379 aa16.16■□□□□ 0.18
ERBB2-220ENST00000584684 MAP4K4O95819 1239 aaPredicted RBP16.16■□□□□ 0.18
ERBB2-220ENST00000584684 ALDH1A1P00352 501 aa16.16■□□□□ 0.18
ERBB2-220ENST00000584684 MAP3K9P80192 1104 aa16.16■□□□□ 0.18
ERBB2-220ENST00000584684 NFIAQ12857 509 aa16.16■□□□□ 0.18
ERBB2-220ENST00000584684 MKRN3Q13064 507 aaKnown RBP16.16■□□□□ 0.18
ERBB2-220ENST00000584684 VGLL4Q14135 290 aa16.16■□□□□ 0.18
ERBB2-220ENST00000584684 HSP90AB4PQ58FF6 505 aa16.16■□□□□ 0.18
ERBB2-220ENST00000584684 CCDC158Q5M9N0 1113 aa16.16■□□□□ 0.18
ERBB2-220ENST00000584684 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.16■□□□□ 0.18
ERBB2-220ENST00000584684 ZNF384Q8TF68 577 aa16.16■□□□□ 0.18
ERBB2-220ENST00000584684 FAM198AQ9UFP1 575 aa16.16■□□□□ 0.18
ERBB2-220ENST00000584684 DBNLQ9UJU6 430 aaKnown RBP16.16■□□□□ 0.18
ERBB2-220ENST00000584684 GPR75-ASB3A0A0A6YYF3 556 aa16.15■□□□□ 0.18
ERBB2-220ENST00000584684 HMMRO75330 724 aa16.15■□□□□ 0.18
ERBB2-220ENST00000584684 ENTPD3O75355 529 aa16.15■□□□□ 0.18
ERBB2-220ENST00000584684 GJA5P36382 358 aa16.15■□□□□ 0.18
ERBB2-220ENST00000584684 GSTO1P78417 241 aa16.15■□□□□ 0.18
ERBB2-220ENST00000584684 TTC39AQ5SRH9 613 aa16.15■□□□□ 0.18
ERBB2-220ENST00000584684 NSUN4Q96CB9 384 aaKnown RBP16.15■□□□□ 0.18
ERBB2-220ENST00000584684 USP40Q9NVE5 1235 aa16.15■□□□□ 0.18
ERBB2-220ENST00000584684 CSADQ9Y600 493 aa16.15■□□□□ 0.18
ERBB2-220ENST00000584684 TESPA1A2RU30 521 aaPredicted RBP16.14■□□□□ 0.17
ERBB2-220ENST00000584684 SPDYE5A6NIY4 337 aa16.14■□□□□ 0.17
ERBB2-220ENST00000584684 NPM3O75607 178 aaKnown RBP16.14■□□□□ 0.17
ERBB2-220ENST00000584684 BTDP43251 543 aa16.14■□□□□ 0.17
ERBB2-220ENST00000584684 EAF2Q96CJ1 260 aaPredicted RBP16.14■□□□□ 0.17
ERBB2-220ENST00000584684 OPTNQ96CV9 577 aa16.14■□□□□ 0.17
ERBB2-220ENST00000584684 WRNIP1Q96S55 665 aa16.14■□□□□ 0.17
ERBB2-220ENST00000584684 ZNF341Q9BYN7 854 aa16.14■□□□□ 0.17
ERBB2-220ENST00000584684 ELP3Q9H9T3 547 aa16.14■□□□□ 0.17
ERBB2-220ENST00000584684 AK9Q5TCS8 1911 aa16.13■□□□□ 0.17
ERBB2-220ENST00000584684 WDHD1O75717 1129 aaPredicted RBP16.13■□□□□ 0.17
ERBB2-220ENST00000584684 LDHCP07864 332 aa16.13■□□□□ 0.17
ERBB2-220ENST00000584684 RHBDL3P58872 404 aa16.13■□□□□ 0.17
ERBB2-220ENST00000584684 IFNL1Q8IU54 200 aa16.13■□□□□ 0.17
ERBB2-220ENST00000584684 SIRT2Q8IXJ6 389 aa16.13■□□□□ 0.17
ERBB2-220ENST00000584684 TLR7Q9NYK1 1049 aaKnown RBP16.13■□□□□ 0.17
ERBB2-220ENST00000584684 ZNF112Q9UJU3 913 aa16.13■□□□□ 0.17
ERBB2-220ENST00000584684 EXOC6BQ9Y2D4 811 aa16.13■□□□□ 0.17
ERBB2-220ENST00000584684 SNCAIPQ9Y6H5 919 aa16.13■□□□□ 0.17
ERBB2-220ENST00000584684 FOCADQ5VW36 1801 aa16.12■□□□□ 0.17
ERBB2-220ENST00000584684 MYO5AQ9Y4I1 1855 aaKnown RBP16.12■□□□□ 0.17
ERBB2-220ENST00000584684 IGF2BP3O00425 579 aaKnown RBP eCLIP16.12■□□□□ 0.17
ERBB2-220ENST00000584684 RGS3P49796 1198 aa16.12■□□□□ 0.17
ERBB2-220ENST00000584684 TCP10Q12799 353 aa16.12■□□□□ 0.17
ERBB2-220ENST00000584684 TBC1D9Q6ZT07 1266 aa16.12■□□□□ 0.17
ERBB2-220ENST00000584684 ERO1BQ86YB8 467 aa16.12■□□□□ 0.17
ERBB2-220ENST00000584684 ABHD8Q96I13 439 aa16.12■□□□□ 0.17
ERBB2-220ENST00000584684 MS4A4AQ96JQ5 239 aa16.12■□□□□ 0.17
ERBB2-220ENST00000584684 RAI14Q9P0K7 980 aa16.12■□□□□ 0.17
ERBB2-220ENST00000584684 LRP2BPQ9P2M1 347 aa16.12■□□□□ 0.17
ERBB2-220ENST00000584684 GTF2A2P52657 109 aa16.11■□□□□ 0.17
ERBB2-220ENST00000584684 NOL9Q5SY16 702 aaKnown RBP16.11■□□□□ 0.17
ERBB2-220ENST00000584684 C20orf194Q5TEA3 1177 aa16.11■□□□□ 0.17
ERBB2-220ENST00000584684 TMED8Q6PL24 325 aaPredicted RBP16.11■□□□□ 0.17
ERBB2-220ENST00000584684 RHPN1Q8TCX5 695 aa16.11■□□□□ 0.17
ERBB2-220ENST00000584684 KIF1BPQ96EK5 621 aa16.11■□□□□ 0.17
ERBB2-220ENST00000584684 MCOLN1Q9GZU1 580 aa16.11■□□□□ 0.17
ERBB2-220ENST00000584684 CDK5RAP2Q96SN8 1893 aa16.11■□□□□ 0.17
ERBB2-220ENST00000584684 TBC1D8O95759 1140 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms