RNA–Protein interactions for RNA: ENST00000584483.5

SMARCD2-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 821 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-211ENST00000584483 SH3RF3Q8TEJ3 882 aaPredicted RBP17.13■□□□□ 0.33
SMARCD2-211ENST00000584483 SDR42E1Q8WUS8 393 aa17.13■□□□□ 0.33
SMARCD2-211ENST00000584483 ZBTB12Q9Y330 459 aaPredicted RBP17.13■□□□□ 0.33
SMARCD2-211ENST00000584483 TACC3Q9Y6A5 838 aa17.13■□□□□ 0.33
SMARCD2-211ENST00000584483 SLC4A4Q9Y6R1 1079 aa17.13■□□□□ 0.33
SMARCD2-211ENST00000584483 BAZ2AQ9UIF9 1905 aaKnown RBP17.13■□□□□ 0.33
SMARCD2-211ENST00000584483 SMIM22K7EJ46 135 aa17.12■□□□□ 0.33
SMARCD2-211ENST00000584483 FZD9O00144 591 aa17.12■□□□□ 0.33
SMARCD2-211ENST00000584483 BTDP43251 543 aa17.12■□□□□ 0.33
SMARCD2-211ENST00000584483 ANAPC15P60006 121 aa17.12■□□□□ 0.33
SMARCD2-211ENST00000584483 STOX1Q6ZVD7 989 aa17.12■□□□□ 0.33
SMARCD2-211ENST00000584483 JDP2Q8WYK2 163 aa17.12■□□□□ 0.33
SMARCD2-211ENST00000584483 NBPF3Q9H094 633 aa17.12■□□□□ 0.33
SMARCD2-211ENST00000584483 LAMA4Q16363 1823 aa17.12■□□□□ 0.33
SMARCD2-211ENST00000584483 MCCP23508 829 aa17.11■□□□□ 0.33
SMARCD2-211ENST00000584483 CRKP46108 304 aa17.11■□□□□ 0.33
SMARCD2-211ENST00000584483 TSGA10IPQ3SY00 556 aa17.11■□□□□ 0.33
SMARCD2-211ENST00000584483 CIAPIN1Q6FI81 312 aa17.11■□□□□ 0.33
SMARCD2-211ENST00000584483 APOBEC3HQ6NTF7 200 aaKnown RBP17.11■□□□□ 0.33
SMARCD2-211ENST00000584483 HHIPL2Q6UWX4 724 aa17.11■□□□□ 0.33
SMARCD2-211ENST00000584483 MRIQ9BWK5 157 aa17.11■□□□□ 0.33
SMARCD2-211ENST00000584483 MKRN1Q9UHC7 482 aaKnown RBP17.11■□□□□ 0.33
SMARCD2-211ENST00000584483 FOCADQ5VW36 1801 aa17.1■□□□□ 0.33
SMARCD2-211ENST00000584483 ECM29Q5VYK3 1845 aa17.1■□□□□ 0.33
SMARCD2-211ENST00000584483 CD2BP2O95400 341 aaKnown RBP17.1■□□□□ 0.33
SMARCD2-211ENST00000584483 APPP05067 770 aa17.1■□□□□ 0.33
SMARCD2-211ENST00000584483 GNAT2P19087 354 aa17.1■□□□□ 0.33
SMARCD2-211ENST00000584483 EVX2Q03828 476 aa17.1■□□□□ 0.33
SMARCD2-211ENST00000584483 NKX2-3Q8TAU0 364 aa17.1■□□□□ 0.33
SMARCD2-211ENST00000584483 SHTN1A0MZ66 631 aa17.09■□□□□ 0.33
SMARCD2-211ENST00000584483 CPA1P15085 419 aa17.09■□□□□ 0.33
SMARCD2-211ENST00000584483 LMNB1P20700 586 aa17.09■□□□□ 0.33
SMARCD2-211ENST00000584483 HAND2P61296 217 aa17.09■□□□□ 0.33
SMARCD2-211ENST00000584483 HDLBPQ00341 1268 aaKnown RBP17.09■□□□□ 0.33
SMARCD2-211ENST00000584483 SLF2Q8IX21 1173 aa17.09■□□□□ 0.33
SMARCD2-211ENST00000584483 CRNKL1Q9BZJ0 848 aaKnown RBP17.09■□□□□ 0.33
SMARCD2-211ENST00000584483 DCP1AQ9NPI6 582 aaPredicted RBP17.09■□□□□ 0.33
SMARCD2-211ENST00000584483 ZMYM6O95789 1325 aa17.09■□□□□ 0.33
SMARCD2-211ENST00000584483 ZNF541Q9H0D2 1346 aa17.09■□□□□ 0.33
SMARCD2-211ENST00000584483 RPAP1Q9BWH6 1393 aaPredicted RBP17.09■□□□□ 0.33
SMARCD2-211ENST00000584483 CYP2D7A0A087X1C5 515 aa17.08■□□□□ 0.32
SMARCD2-211ENST00000584483 BAG3O95817 575 aa17.08■□□□□ 0.32
SMARCD2-211ENST00000584483 TEKT1Q969V4 418 aa17.08■□□□□ 0.32
SMARCD2-211ENST00000584483 ZDHHC15Q96MV8 337 aa17.08■□□□□ 0.32
SMARCD2-211ENST00000584483 INCENPQ9NQS7 918 aa17.08■□□□□ 0.32
SMARCD2-211ENST00000584483 CTNNA3Q9UI47 895 aa17.08■□□□□ 0.32
SMARCD2-211ENST00000584483 DDX60LQ5H9U9 1706 aaKnown RBP17.07■□□□□ 0.32
SMARCD2-211ENST00000584483 MYO3BQ8WXR4 1341 aa17.07■□□□□ 0.32
SMARCD2-211ENST00000584483 E7EWF7 191 aa17.07■□□□□ 0.32
SMARCD2-211ENST00000584483 CTDSPL2Q05D32 466 aa17.07■□□□□ 0.32
SMARCD2-211ENST00000584483 RABEP1Q15276 862 aa17.07■□□□□ 0.32
SMARCD2-211ENST00000584483 CDC42EP5Q6NZY7 148 aa17.07■□□□□ 0.32
SMARCD2-211ENST00000584483 CTR9Q6PD62 1173 aa17.07■□□□□ 0.32
SMARCD2-211ENST00000584483 TBC1D10CQ8IV04 446 aa17.07■□□□□ 0.32
SMARCD2-211ENST00000584483 AGBL3Q8NEM8 1001 aa17.07■□□□□ 0.32
SMARCD2-211ENST00000584483 TGFBRAP1Q8WUH2 860 aa17.07■□□□□ 0.32
SMARCD2-211ENST00000584483 UPF3BQ9BZI7 483 aaKnown RBP17.07■□□□□ 0.32
SMARCD2-211ENST00000584483 SERPINA10Q9UK55 444 aa17.07■□□□□ 0.32
SMARCD2-211ENST00000584483 NAV1Q8NEY1 1877 aa17.07■□□□□ 0.32
SMARCD2-211ENST00000584483 WDHD1O75717 1129 aaPredicted RBP17.06■□□□□ 0.32
SMARCD2-211ENST00000584483 CYP2D6P10635 497 aa17.06■□□□□ 0.32
SMARCD2-211ENST00000584483 TNIP1Q15025 636 aa17.06■□□□□ 0.32
SMARCD2-211ENST00000584483 CFAP100Q494V2 611 aa17.06■□□□□ 0.32
SMARCD2-211ENST00000584483 RNF20Q5VTR2 975 aa17.06■□□□□ 0.32
SMARCD2-211ENST00000584483 GIMAP6Q6P9H5 292 aa17.06■□□□□ 0.32
SMARCD2-211ENST00000584483 PRMT6Q96LA8 375 aaPredicted RBP17.06■□□□□ 0.32
SMARCD2-211ENST00000584483 JAKMIP1Q96N16 626 aaKnown RBP17.06■□□□□ 0.32
SMARCD2-211ENST00000584483 TM6SF1Q9BZW5 370 aa17.06■□□□□ 0.32
SMARCD2-211ENST00000584483 NAPBQ9H115 298 aa17.06■□□□□ 0.32
SMARCD2-211ENST00000584483 ZSWIM6Q9HCJ5 1215 aa17.06■□□□□ 0.32
SMARCD2-211ENST00000584483 DDX4Q9NQI0 724 aaKnown RBP17.06■□□□□ 0.32
SMARCD2-211ENST00000584483 ATP8A2Q9NTI2 1148 aa17.06■□□□□ 0.32
SMARCD2-211ENST00000584483 USP40Q9NVE5 1235 aa17.06■□□□□ 0.32
SMARCD2-211ENST00000584483 TIAM2Q8IVF5 1701 aa17.06■□□□□ 0.32
SMARCD2-211ENST00000584483 LAMB1P07942 1786 aa17.05■□□□□ 0.32
SMARCD2-211ENST00000584483 USP17L12C9JPN9 530 aa17.05■□□□□ 0.32
SMARCD2-211ENST00000584483 USP17L21D6R901 530 aa17.05■□□□□ 0.32
SMARCD2-211ENST00000584483 ZNF213O14771 459 aa17.05■□□□□ 0.32
SMARCD2-211ENST00000584483 USP17L8P0C7I0 530 aa17.05■□□□□ 0.32
SMARCD2-211ENST00000584483 ZKSCAN1P17029 563 aaPredicted RBP17.05■□□□□ 0.32
SMARCD2-211ENST00000584483 ANP32AP39687 249 aaKnown RBP17.05■□□□□ 0.32
SMARCD2-211ENST00000584483 TDO2P48775 406 aa17.05■□□□□ 0.32
SMARCD2-211ENST00000584483 IMMTQ16891 758 aaKnown RBP17.05■□□□□ 0.32
SMARCD2-211ENST00000584483 MAPKAPK5Q8IW41 473 aa17.05■□□□□ 0.32
SMARCD2-211ENST00000584483 TEX11Q8IYF3 940 aa17.05■□□□□ 0.32
SMARCD2-211ENST00000584483 ZBED3Q96IU2 234 aaPredicted RBP17.05■□□□□ 0.32
SMARCD2-211ENST00000584483 TTC14Q96N46 770 aa17.05■□□□□ 0.32
SMARCD2-211ENST00000584483 NOL10Q9BSC4 688 aaKnown RBP17.05■□□□□ 0.32
SMARCD2-211ENST00000584483 MYH1P12882 1939 aa17.05■□□□□ 0.32
SMARCD2-211ENST00000584483 CASTP20810 708 aaKnown RBP17.04■□□□□ 0.32
SMARCD2-211ENST00000584483 GMPSP49915 693 aaPredicted RBP17.04■□□□□ 0.32
SMARCD2-211ENST00000584483 NEK4P51957 841 aa17.04■□□□□ 0.32
SMARCD2-211ENST00000584483 EIF6P56537 245 aaKnown RBP17.04■□□□□ 0.32
SMARCD2-211ENST00000584483 GPR162Q16538 588 aa17.04■□□□□ 0.32
SMARCD2-211ENST00000584483 TBC1D2Q9BYX2 928 aa17.04■□□□□ 0.32
SMARCD2-211ENST00000584483 NACAP1Q9BZK3 213 aa17.04■□□□□ 0.32
SMARCD2-211ENST00000584483 RNF181Q9P0P0 153 aa17.04■□□□□ 0.32
SMARCD2-211ENST00000584483 ANAPC4Q9UJX5 808 aa17.04■□□□□ 0.32
SMARCD2-211ENST00000584483 GJA3Q9Y6H8 435 aa17.04■□□□□ 0.32
SMARCD2-211ENST00000584483 FLT1P17948 1338 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms