RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 DBNDD2Q9BQY9 259 aa25.11■■□□□ 1.61
SS18-224ENST00000584083 ZBTB40Q9NUA8 1239 aa25.11■■□□□ 1.61
SS18-224ENST00000584083 PDE3AQ14432 1141 aa25.1■■□□□ 1.61
SS18-224ENST00000584083 CCDC158Q5M9N0 1113 aa25.1■■□□□ 1.61
SS18-224ENST00000584083 TTC39AQ5SRH9 613 aa25.1■■□□□ 1.61
SS18-224ENST00000584083 PI16Q6UXB8 463 aa25.1■■□□□ 1.61
SS18-224ENST00000584083 SLF2Q8IX21 1173 aa25.1■■□□□ 1.61
SS18-224ENST00000584083 CLMNQ96JQ2 1002 aa25.1■■□□□ 1.61
SS18-224ENST00000584083 USP40Q9NVE5 1235 aa25.1■■□□□ 1.61
SS18-224ENST00000584083 EXOC6BQ9Y2D4 811 aa25.1■■□□□ 1.61
SS18-224ENST00000584083 TRPA1O75762 1119 aa25.09■■□□□ 1.61
SS18-224ENST00000584083 C20orf194Q5TEA3 1177 aa25.09■■□□□ 1.61
SS18-224ENST00000584083 ERC1Q8IUD2 1116 aa25.09■■□□□ 1.61
SS18-224ENST00000584083 RPAP2Q8IXW5 612 aaPredicted RBP25.09■■□□□ 1.61
SS18-224ENST00000584083 YTHDC1Q96MU7 727 aaKnown RBP25.09■■□□□ 1.61
SS18-224ENST00000584083 RNF186Q9NXI6 227 aa25.09■■□□□ 1.61
SS18-224ENST00000584083 CASP8AP2Q9UKL3 1982 aa25.09■■□□□ 1.61
SS18-224ENST00000584083 UNCXA6NJT0 531 aa25.08■■□□□ 1.61
SS18-224ENST00000584083 MCAMP43121 646 aa25.08■■□□□ 1.61
SS18-224ENST00000584083 SPRYD7Q5W111 196 aa25.08■■□□□ 1.61
SS18-224ENST00000584083 TBC1D9Q6ZT07 1266 aa25.08■■□□□ 1.61
SS18-224ENST00000584083 ANKRD13AQ8IZ07 590 aa25.08■■□□□ 1.61
SS18-224ENST00000584083 HMMRO75330 724 aa25.07■■□□□ 1.6
SS18-224ENST00000584083 TCP10Q12799 353 aa25.07■■□□□ 1.6
SS18-224ENST00000584083 HSP90AB4PQ58FF6 505 aa25.07■■□□□ 1.6
SS18-224ENST00000584083 HOOK2Q96ED9 719 aa25.07■■□□□ 1.6
SS18-224ENST00000584083 CCDC8Q9H0W5 538 aaPredicted RBP25.07■■□□□ 1.6
SS18-224ENST00000584083 SAGE1Q9NXZ1 904 aa25.07■■□□□ 1.6
SS18-224ENST00000584083 OTOFQ9HC10 1997 aa25.06■■□□□ 1.6
SS18-224ENST00000584083 MECOMQ03112 1051 aa25.06■■□□□ 1.6
SS18-224ENST00000584083 FAM151AQ8WW52 585 aa25.06■■□□□ 1.6
SS18-224ENST00000584083 SNRKQ9NRH2 765 aa25.06■■□□□ 1.6
SS18-224ENST00000584083 RAI14Q9P0K7 980 aa25.06■■□□□ 1.6
SS18-224ENST00000584083 GAKO14976 1311 aa25.06■■□□□ 1.6
SS18-224ENST00000584083 SREBF2Q12772 1141 aa25.05■■□□□ 1.6
SS18-224ENST00000584083 EAF2Q96CJ1 260 aaPredicted RBP25.05■■□□□ 1.6
SS18-224ENST00000584083 FAM163AQ96GL9 167 aaPredicted RBP25.05■■□□□ 1.6
SS18-224ENST00000584083 WNK4Q96J92 1243 aa25.05■■□□□ 1.6
SS18-224ENST00000584083 LRP2BPQ9P2M1 347 aa25.05■■□□□ 1.6
SS18-224ENST00000584083 DBNLQ9UJU6 430 aaKnown RBP25.05■■□□□ 1.6
SS18-224ENST00000584083 GSTO1P78417 241 aa25.04■■□□□ 1.6
SS18-224ENST00000584083 NFIAQ12857 509 aa25.04■■□□□ 1.6
SS18-224ENST00000584083 ELP3Q9H9T3 547 aa25.04■■□□□ 1.6
SS18-224ENST00000584083 TLR7Q9NYK1 1049 aaKnown RBP25.04■■□□□ 1.6
SS18-224ENST00000584083 APBB1O00213 710 aa25.03■■□□□ 1.6
SS18-224ENST00000584083 LDHCP07864 332 aa25.03■■□□□ 1.6
SS18-224ENST00000584083 BTDP43251 543 aa25.03■■□□□ 1.6
SS18-224ENST00000584083 TM4SF4P48230 202 aa25.03■■□□□ 1.6
SS18-224ENST00000584083 MAP3K9P80192 1104 aa25.03■■□□□ 1.6
SS18-224ENST00000584083 SIRT2Q8IXJ6 389 aa25.03■■□□□ 1.6
SS18-224ENST00000584083 MROH7-TTC4A0A0A0MT08 1334 aa25.03■■□□□ 1.6
SS18-224ENST00000584083 RPAP1Q9BWH6 1393 aaPredicted RBP25.03■■□□□ 1.6
SS18-224ENST00000584083 ZBTB48P10074 688 aaPredicted RBP25.02■■□□□ 1.6
SS18-224ENST00000584083 DCAF15Q66K64 600 aa25.02■■□□□ 1.6
SS18-224ENST00000584083 AACSQ86V21 672 aa25.02■■□□□ 1.6
SS18-224ENST00000584083 ZNF512BQ96KM6 892 aaPredicted RBP25.02■■□□□ 1.6
SS18-224ENST00000584083 IL1RAPL2Q9NP60 686 aa25.02■■□□□ 1.6
SS18-224ENST00000584083 FAM198AQ9UFP1 575 aa25.02■■□□□ 1.6
SS18-224ENST00000584083 CSADQ9Y600 493 aa25.02■■□□□ 1.6
SS18-224ENST00000584083 MANSC4A6NHS7 340 aaPredicted RBP25.01■■□□□ 1.59
SS18-224ENST00000584083 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.01■■□□□ 1.59
SS18-224ENST00000584083 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.01■■□□□ 1.59
SS18-224ENST00000584083 RHPN1Q8TCX5 695 aa25.01■■□□□ 1.59
SS18-224ENST00000584083 NSUN4Q96CB9 384 aaKnown RBP25.01■■□□□ 1.59
SS18-224ENST00000584083 MYO5AQ9Y4I1 1855 aaKnown RBP25■■□□□ 1.59
SS18-224ENST00000584083 RGS3P49796 1198 aa25■■□□□ 1.59
SS18-224ENST00000584083 VGLL4Q14135 290 aa25■■□□□ 1.59
SS18-224ENST00000584083 MIGA2Q7L4E1 593 aa25■■□□□ 1.59
SS18-224ENST00000584083 ZNF384Q8TF68 577 aa25■■□□□ 1.59
SS18-224ENST00000584083 OPTNQ96CV9 577 aa25■■□□□ 1.59
SS18-224ENST00000584083 WRNIP1Q96S55 665 aa25■■□□□ 1.59
SS18-224ENST00000584083 BCL11AQ9H165 835 aa25■■□□□ 1.59
SS18-224ENST00000584083 GPR75-ASB3A0A0A6YYF3 556 aa24.99■■□□□ 1.59
SS18-224ENST00000584083 ZAP70P43403 619 aa24.99■■□□□ 1.59
SS18-224ENST00000584083 INHBEP58166 350 aa24.99■■□□□ 1.59
SS18-224ENST00000584083 ZFPM1Q8IX07 1006 aa24.99■■□□□ 1.59
SS18-224ENST00000584083 KIF1BPQ96EK5 621 aa24.99■■□□□ 1.59
SS18-224ENST00000584083 IDI2Q9BXS1 227 aa24.99■■□□□ 1.59
SS18-224ENST00000584083 ZNF341Q9BYN7 854 aa24.99■■□□□ 1.59
SS18-224ENST00000584083 ENTPD3O75355 529 aa24.98■■□□□ 1.59
SS18-224ENST00000584083 CAPN15O75808 1086 aa24.98■■□□□ 1.59
SS18-224ENST00000584083 CYP2E1P05181 493 aaPredicted RBP24.98■■□□□ 1.59
SS18-224ENST00000584083 GJA5P36382 358 aa24.98■■□□□ 1.59
SS18-224ENST00000584083 ZSCAN29Q8IWY8 852 aaPredicted RBP24.98■■□□□ 1.59
SS18-224ENST00000584083 CLASRPQ8N2M8 674 aaKnown RBP24.98■■□□□ 1.59
SS18-224ENST00000584083 NOL10Q9BSC4 688 aaKnown RBP24.98■■□□□ 1.59
SS18-224ENST00000584083 RAB11FIP3O75154 756 aa24.97■■□□□ 1.59
SS18-224ENST00000584083 TBC1D8O95759 1140 aa24.97■■□□□ 1.59
SS18-224ENST00000584083 PICALMQ13492 652 aa24.97■■□□□ 1.59
SS18-224ENST00000584083 NAA16Q6N069 864 aaPredicted RBP24.97■■□□□ 1.59
SS18-224ENST00000584083 LAMB1P07942 1786 aa24.96■■□□□ 1.59
SS18-224ENST00000584083 MAST2Q6P0Q8 1798 aa24.96■■□□□ 1.59
SS18-224ENST00000584083 WDHD1O75717 1129 aaPredicted RBP24.96■■□□□ 1.59
SS18-224ENST00000584083 CNKSR2Q8WXI2 1034 aa24.96■■□□□ 1.59
SS18-224ENST00000584083 ZKSCAN4Q969J2 545 aaPredicted RBP24.96■■□□□ 1.59
SS18-224ENST00000584083 DOCK2Q92608 1830 aa24.96■■□□□ 1.59
SS18-224ENST00000584083 RHBDL3P58872 404 aa24.95■■□□□ 1.58
SS18-224ENST00000584083 IFNL1Q8IU54 200 aa24.95■■□□□ 1.58
SS18-224ENST00000584083 OTUD5Q96G74 571 aa24.95■■□□□ 1.58
SS18-224ENST00000584083 PIH1D3Q9NQM4 214 aaKnown RBP24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms