RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 DDNO94850 711 aaPredicted RBP12.58□□□□□ -0.4
CCDC47-203ENST00000580986 LDHCP07864 332 aa12.58□□□□□ -0.4
CCDC47-203ENST00000580986 SDSP20132 328 aa12.58□□□□□ -0.4
CCDC47-203ENST00000580986 ADD2P35612 726 aa12.58□□□□□ -0.4
CCDC47-203ENST00000580986 RGS3P49796 1198 aa12.58□□□□□ -0.4
CCDC47-203ENST00000580986 GMPSP49915 693 aaPredicted RBP12.58□□□□□ -0.4
CCDC47-203ENST00000580986 NUBP1P53384 320 aa12.58□□□□□ -0.4
CCDC47-203ENST00000580986 MECOMQ03112 1051 aa12.58□□□□□ -0.4
CCDC47-203ENST00000580986 TBC1D9Q6ZT07 1266 aa12.58□□□□□ -0.4
CCDC47-203ENST00000580986 FBXW7Q969H0 707 aa12.58□□□□□ -0.4
CCDC47-203ENST00000580986 TEKT1Q969V4 418 aa12.58□□□□□ -0.4
CCDC47-203ENST00000580986 EDC3Q96F86 508 aaKnown RBP12.58□□□□□ -0.4
CCDC47-203ENST00000580986 ZDHHC15Q96MV8 337 aa12.58□□□□□ -0.4
CCDC47-203ENST00000580986 TTF2Q9UNY4 1162 aaKnown RBP12.58□□□□□ -0.4
CCDC47-203ENST00000580986 NDUFB9Q9Y6M9 179 aa12.58□□□□□ -0.4
CCDC47-203ENST00000580986 TCRBV5S4A2TA0A5A2 114 aa12.57□□□□□ -0.4
CCDC47-203ENST00000580986 TRIM6-TRIM34B2RNG4 842 aa12.57□□□□□ -0.4
CCDC47-203ENST00000580986 PDE6AP16499 860 aa12.57□□□□□ -0.4
CCDC47-203ENST00000580986 GRIK5Q16478 980 aa12.57□□□□□ -0.4
CCDC47-203ENST00000580986 NAA16Q6N069 864 aaPredicted RBP12.57□□□□□ -0.4
CCDC47-203ENST00000580986 KIAA0825Q8IV33 1275 aa12.57□□□□□ -0.4
CCDC47-203ENST00000580986 ZNF384Q8TF68 577 aa12.57□□□□□ -0.4
CCDC47-203ENST00000580986 ZBED3Q96IU2 234 aaPredicted RBP12.57□□□□□ -0.4
CCDC47-203ENST00000580986 FSD1Q9BTV5 496 aa12.57□□□□□ -0.4
CCDC47-203ENST00000580986 RAI14Q9P0K7 980 aa12.57□□□□□ -0.4
CCDC47-203ENST00000580986 JAG2Q9Y219 1238 aa12.57□□□□□ -0.4
CCDC47-203ENST00000580986 GJA3Q9Y6H8 435 aa12.57□□□□□ -0.4
CCDC47-203ENST00000580986 MROH7-TTC4A0A0A0MT08 1334 aa12.57□□□□□ -0.4
CCDC47-203ENST00000580986 H7C1D1 291 aa12.56□□□□□ -0.4
CCDC47-203ENST00000580986 LMOD1P29536 600 aaPredicted RBP12.56□□□□□ -0.4
CCDC47-203ENST00000580986 CRKP46108 304 aa12.56□□□□□ -0.4
CCDC47-203ENST00000580986 PPP4CP60510 307 aa12.56□□□□□ -0.4
CCDC47-203ENST00000580986 SLC9C2Q5TAH2 1124 aa12.56□□□□□ -0.4
CCDC47-203ENST00000580986 MICALL2Q8IY33 904 aa12.56□□□□□ -0.4
CCDC47-203ENST00000580986 APPBP2Q92624 585 aa12.56□□□□□ -0.4
CCDC47-203ENST00000580986 MXD3Q9BW11 206 aa12.56□□□□□ -0.4
CCDC47-203ENST00000580986 ADARB2Q9NS39 739 aaKnown RBP12.56□□□□□ -0.4
CCDC47-203ENST00000580986 CNOT7Q9UIV1 285 aaKnown RBP12.56□□□□□ -0.4
CCDC47-203ENST00000580986 GPR75-ASB3A0A0A6YYF3 556 aa12.55□□□□□ -0.4
CCDC47-203ENST00000580986 RNF113AO15541 343 aaKnown RBP12.55□□□□□ -0.4
CCDC47-203ENST00000580986 PLCG2P16885 1265 aa12.55□□□□□ -0.4
CCDC47-203ENST00000580986 USP50Q70EL3 339 aaPredicted RBP12.55□□□□□ -0.4
CCDC47-203ENST00000580986 SKAP1Q86WV1 359 aa12.55□□□□□ -0.4
CCDC47-203ENST00000580986 MAGEB6Q8N7X4 407 aa12.55□□□□□ -0.4
CCDC47-203ENST00000580986 RILPL2Q969X0 211 aa12.55□□□□□ -0.4
CCDC47-203ENST00000580986 MYOZ2Q9NPC6 264 aa12.55□□□□□ -0.4
CCDC47-203ENST00000580986 PCDH10Q9P2E7 1040 aa12.55□□□□□ -0.4
CCDC47-203ENST00000580986 HACL1Q9UJ83 578 aa12.55□□□□□ -0.4
CCDC47-203ENST00000580986 COLQQ9Y215 455 aaPredicted RBP12.55□□□□□ -0.4
CCDC47-203ENST00000580986 ADAMTSL1Q8N6G6 1762 aa12.55□□□□□ -0.4
CCDC47-203ENST00000580986 RAD50Q92878 1312 aa12.55□□□□□ -0.4
CCDC47-203ENST00000580986 ZNF532Q9HCE3 1301 aa12.55□□□□□ -0.4
CCDC47-203ENST00000580986 FOCADQ5VW36 1801 aa12.55□□□□□ -0.4
CCDC47-203ENST00000580986 BAG3O95817 575 aa12.54□□□□□ -0.4
CCDC47-203ENST00000580986 CYP7A1P22680 504 aa12.54□□□□□ -0.4
CCDC47-203ENST00000580986 ZMYM1Q5SVZ6 1142 aa12.54□□□□□ -0.4
CCDC47-203ENST00000580986 FKBP1CQ5VVH2 108 aa12.54□□□□□ -0.4
CCDC47-203ENST00000580986 PNMA8AQ86V59 439 aaPredicted RBP12.54□□□□□ -0.4
CCDC47-203ENST00000580986 ZC3H15Q8WU90 426 aaKnown RBP12.54□□□□□ -0.4
CCDC47-203ENST00000580986 FAM212AQ96EL1 285 aa12.54□□□□□ -0.4
CCDC47-203ENST00000580986 HELLSQ9NRZ9 838 aa12.54□□□□□ -0.4
CCDC47-203ENST00000580986 DAGLAQ9Y4D2 1042 aa12.54□□□□□ -0.4
CCDC47-203ENST00000580986 VEGFAP15692 232 aaPredicted RBP12.53□□□□□ -0.4
CCDC47-203ENST00000580986 DLGAP5Q15398 846 aa12.53□□□□□ -0.4
CCDC47-203ENST00000580986 DIXDC1Q155Q3 683 aa12.53□□□□□ -0.4
CCDC47-203ENST00000580986 KIF4BQ2VIQ3 1234 aa12.53□□□□□ -0.4
CCDC47-203ENST00000580986 CFAP100Q494V2 611 aa12.53□□□□□ -0.4
CCDC47-203ENST00000580986 APOBEC3HQ6NTF7 200 aaKnown RBP12.53□□□□□ -0.4
CCDC47-203ENST00000580986 RIOK1Q9BRS2 568 aaKnown RBP12.53□□□□□ -0.4
CCDC47-203ENST00000580986 NOL10Q9BSC4 688 aaKnown RBP12.53□□□□□ -0.4
CCDC47-203ENST00000580986 PITPNM2Q9BZ72 1349 aa12.53□□□□□ -0.4
CCDC47-203ENST00000580986 RPAP1Q9BWH6 1393 aaPredicted RBP12.53□□□□□ -0.4
CCDC47-203ENST00000580986 COL2A1P02458 1487 aaPredicted RBP12.53□□□□□ -0.4
CCDC47-203ENST00000580986 POTECB2RU33 542 aa12.52□□□□□ -0.41
CCDC47-203ENST00000580986 F8W031 263 aaPredicted RBP12.52□□□□□ -0.41
CCDC47-203ENST00000580986 WNT10BO00744 389 aa12.52□□□□□ -0.41
CCDC47-203ENST00000580986 MYO1BO43795 1136 aa12.52□□□□□ -0.41
CCDC47-203ENST00000580986 CHMLP26374 656 aa12.52□□□□□ -0.41
CCDC47-203ENST00000580986 EPHX2P34913 555 aa12.52□□□□□ -0.41
CCDC47-203ENST00000580986 EPS15P42566 896 aa12.52□□□□□ -0.41
CCDC47-203ENST00000580986 MFAP1P55081 439 aaKnown RBP12.52□□□□□ -0.41
CCDC47-203ENST00000580986 CASC1Q6TDU7 716 aa12.52□□□□□ -0.41
CCDC47-203ENST00000580986 ADGRA1Q86SQ6 560 aa12.52□□□□□ -0.41
CCDC47-203ENST00000580986 RUFY2Q8WXA3 655 aa12.52□□□□□ -0.41
CCDC47-203ENST00000580986 TAF1DQ9H5J8 278 aaPredicted RBP12.52□□□□□ -0.41
CCDC47-203ENST00000580986 DIAPH3Q9NSV4 1193 aa12.52□□□□□ -0.41
CCDC47-203ENST00000580986 PGAP2Q9UHJ9 254 aa12.52□□□□□ -0.41
CCDC47-203ENST00000580986 DDX60LQ5H9U9 1706 aaKnown RBP12.51□□□□□ -0.41
CCDC47-203ENST00000580986 CDK5RAP2Q96SN8 1893 aa12.51□□□□□ -0.41
CCDC47-203ENST00000580986 EIF5BO60841 1220 aaKnown RBP12.51□□□□□ -0.41
CCDC47-203ENST00000580986 CDC45O75419 566 aa12.51□□□□□ -0.41
CCDC47-203ENST00000580986 GNAT2P19087 354 aa12.51□□□□□ -0.41
CCDC47-203ENST00000580986 BTDP43251 543 aa12.51□□□□□ -0.41
CCDC47-203ENST00000580986 RHBDL3P58872 404 aa12.51□□□□□ -0.41
CCDC47-203ENST00000580986 MCMDC2Q4G0Z9 681 aa12.51□□□□□ -0.41
CCDC47-203ENST00000580986 IER5LQ5T953 404 aa12.51□□□□□ -0.41
CCDC47-203ENST00000580986 OSBP2Q969R2 916 aa12.51□□□□□ -0.41
CCDC47-203ENST00000580986 PRMT6Q96LA8 375 aaPredicted RBP12.51□□□□□ -0.41
CCDC47-203ENST00000580986 IDI2Q9BXS1 227 aa12.51□□□□□ -0.41
CCDC47-203ENST00000580986 MAGEB6P1A0A0J9YX57 407 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms