RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 LMNB2Q03252 620 aa4.06□□□□□ -1.76
COPS3-213ENST00000577210 COL9A2Q14055 689 aaPredicted RBP4.06□□□□□ -1.76
COPS3-213ENST00000577210 ADGRE1Q14246 886 aa4.06□□□□□ -1.76
COPS3-213ENST00000577210 EXOSC6Q5RKV6 272 aaKnown RBP4.06□□□□□ -1.76
COPS3-213ENST00000577210 PCNX4Q63HM2 1172 aa4.06□□□□□ -1.76
COPS3-213ENST00000577210 ANKRD34AQ69YU3 496 aa4.06□□□□□ -1.76
COPS3-213ENST00000577210 AGMOQ6ZNB7 445 aa4.06□□□□□ -1.76
COPS3-213ENST00000577210 ERMP1Q7Z2K6 904 aa4.06□□□□□ -1.76
COPS3-213ENST00000577210 USP48Q86UV5 1035 aa4.06□□□□□ -1.76
COPS3-213ENST00000577210 ZNF428Q96B54 188 aa4.06□□□□□ -1.76
COPS3-213ENST00000577210 LENG1Q96BZ8 264 aaPredicted RBP4.06□□□□□ -1.76
COPS3-213ENST00000577210 CBX8Q9HC52 389 aa4.06□□□□□ -1.76
COPS3-213ENST00000577210 SUPT16HQ9Y5B9 1047 aaKnown RBP4.06□□□□□ -1.76
COPS3-213ENST00000577210 MAOBP27338 520 aa4.05□□□□□ -1.76
COPS3-213ENST00000577210 CDC25BP30305 580 aa4.05□□□□□ -1.76
COPS3-213ENST00000577210 GBP2P32456 591 aaPredicted RBP4.05□□□□□ -1.76
COPS3-213ENST00000577210 ZC3H6P61129 1189 aaKnown RBP4.05□□□□□ -1.76
COPS3-213ENST00000577210 FAAP100Q0VG06 881 aa4.05□□□□□ -1.76
COPS3-213ENST00000577210 PDE3AQ14432 1141 aa4.05□□□□□ -1.76
COPS3-213ENST00000577210 PRSS36Q5K4E3 855 aa4.05□□□□□ -1.76
COPS3-213ENST00000577210 NUTM2GQ5VZR2 741 aa4.05□□□□□ -1.76
COPS3-213ENST00000577210 NT5DC4Q86YG4 428 aa4.05□□□□□ -1.76
COPS3-213ENST00000577210 TRIM42Q8IWZ5 723 aa4.05□□□□□ -1.76
COPS3-213ENST00000577210 KLHDC7BQ96G42 594 aa4.05□□□□□ -1.76
COPS3-213ENST00000577210 ACSBG1Q96GR2 724 aa4.05□□□□□ -1.76
COPS3-213ENST00000577210 C8orf37Q96NL8 207 aa4.05□□□□□ -1.76
COPS3-213ENST00000577210 YIPF2Q9BWQ6 316 aa4.05□□□□□ -1.76
COPS3-213ENST00000577210 USP26Q9BXU7 913 aa4.05□□□□□ -1.76
COPS3-213ENST00000577210 KRTAP4-7Q9BYR0 210 aa4.05□□□□□ -1.76
COPS3-213ENST00000577210 SUGCTQ9HAC7 445 aa4.05□□□□□ -1.76
COPS3-213ENST00000577210 RAD18Q9NS91 495 aa4.05□□□□□ -1.76
COPS3-213ENST00000577210 RNF19AQ9NV58 838 aa4.05□□□□□ -1.76
COPS3-213ENST00000577210 TACC3Q9Y6A5 838 aa4.05□□□□□ -1.76
COPS3-213ENST00000577210 SCO2A0A1W2PP80 73 aa4.04□□□□□ -1.76
COPS3-213ENST00000577210 SART1O43290 800 aaKnown RBP4.04□□□□□ -1.76
COPS3-213ENST00000577210 EIF4A3P38919 411 aaKnown RBP4.04□□□□□ -1.76
COPS3-213ENST00000577210 NLRP12P59046 1061 aa4.04□□□□□ -1.76
COPS3-213ENST00000577210 HDLBPQ00341 1268 aaKnown RBP4.04□□□□□ -1.76
COPS3-213ENST00000577210 MLECQ14165 292 aa4.04□□□□□ -1.76
COPS3-213ENST00000577210 UVSSAQ2YD98 709 aa4.04□□□□□ -1.76
COPS3-213ENST00000577210 SNAP47Q5SQN1 464 aa4.04□□□□□ -1.76
COPS3-213ENST00000577210 FDX2Q6P4F2 183 aa4.04□□□□□ -1.76
COPS3-213ENST00000577210 TXNDC11Q6PKC3 985 aa4.04□□□□□ -1.76
COPS3-213ENST00000577210 ACAD11Q709F0 780 aa4.04□□□□□ -1.76
COPS3-213ENST00000577210 TXNRD3Q86VQ6 643 aa4.04□□□□□ -1.76
COPS3-213ENST00000577210 KIAA0825Q8IV33 1275 aa4.04□□□□□ -1.76
COPS3-213ENST00000577210 KCT2Q8NC54 265 aa4.04□□□□□ -1.76
COPS3-213ENST00000577210 PHC3Q8NDX5 983 aa4.04□□□□□ -1.76
COPS3-213ENST00000577210 KCNB2Q92953 911 aa4.04□□□□□ -1.76
COPS3-213ENST00000577210 RUSC1Q9BVN2 902 aa4.04□□□□□ -1.76
COPS3-213ENST00000577210 KCNQ5Q9NR82 932 aa4.04□□□□□ -1.76
COPS3-213ENST00000577210 IGSF5Q9NSI5 407 aa4.04□□□□□ -1.76
COPS3-213ENST00000577210 DDX41Q9UJV9 622 aaKnown RBP4.04□□□□□ -1.76
COPS3-213ENST00000577210 USP21Q9UK80 565 aa4.04□□□□□ -1.76
COPS3-213ENST00000577210 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.04□□□□□ -1.76
COPS3-213ENST00000577210 SNCAIPQ9Y6H5 919 aa4.04□□□□□ -1.76
COPS3-213ENST00000577210 LOC100289279A0A1B0GTE1 492 aa4.03□□□□□ -1.76
COPS3-213ENST00000577210 DEAF1O75398 565 aaPredicted RBP4.03□□□□□ -1.76
COPS3-213ENST00000577210 FBXO24O75426 580 aa4.03□□□□□ -1.76
COPS3-213ENST00000577210 CELA3AP09093 270 aa4.03□□□□□ -1.76
COPS3-213ENST00000577210 BMP6P22004 513 aa4.03□□□□□ -1.76
COPS3-213ENST00000577210 ZNF157P51786 506 aaPredicted RBP4.03□□□□□ -1.76
COPS3-213ENST00000577210 PDE4BQ07343 736 aa4.03□□□□□ -1.76
COPS3-213ENST00000577210 ZNF252P-AS1Q0IIN9 211 aa4.03□□□□□ -1.76
COPS3-213ENST00000577210 CAMK2GQ13555 558 aaPredicted RBP4.03□□□□□ -1.76
COPS3-213ENST00000577210 MPP2Q14168 576 aa4.03□□□□□ -1.76
COPS3-213ENST00000577210 CWF19L2Q2TBE0 894 aaKnown RBP4.03□□□□□ -1.76
COPS3-213ENST00000577210 KIF4BQ2VIQ3 1234 aa4.03□□□□□ -1.76
COPS3-213ENST00000577210 LDLRAD1Q5T700 205 aa4.03□□□□□ -1.76
COPS3-213ENST00000577210 MAP1SQ66K74 1059 aaPredicted RBP4.03□□□□□ -1.76
COPS3-213ENST00000577210 HDXQ7Z353 690 aa4.03□□□□□ -1.76
COPS3-213ENST00000577210 METTL16Q86W50 562 aaKnown RBP4.03□□□□□ -1.76
COPS3-213ENST00000577210 GALNT11Q8NCW6 608 aa4.03□□□□□ -1.76
COPS3-213ENST00000577210 SMG8Q8ND04 991 aaKnown RBP4.03□□□□□ -1.76
COPS3-213ENST00000577210 RHOVQ96L33 236 aa4.03□□□□□ -1.76
COPS3-213ENST00000577210 SPON2Q9BUD6 331 aa4.03□□□□□ -1.76
COPS3-213ENST00000577210 CARD10Q9BWT7 1032 aa4.03□□□□□ -1.76
COPS3-213ENST00000577210 NT5C1AQ9BXI3 368 aa4.03□□□□□ -1.76
COPS3-213ENST00000577210 ATXN3LQ9H3M9 355 aa4.03□□□□□ -1.76
COPS3-213ENST00000577210 AKTIPQ9H8T0 292 aa4.03□□□□□ -1.76
COPS3-213ENST00000577210 KBTBD4Q9NVX7 518 aa4.03□□□□□ -1.76
COPS3-213ENST00000577210 HIF3AQ9Y2N7 669 aa4.03□□□□□ -1.76
COPS3-213ENST00000577210 IMPDH2P12268 514 aa4.02□□□□□ -1.77
COPS3-213ENST00000577210 ID3Q02535 119 aa4.02□□□□□ -1.77
COPS3-213ENST00000577210 RPL6Q02878 288 aaKnown RBP4.02□□□□□ -1.77
COPS3-213ENST00000577210 SF3A1Q15459 793 aaKnown RBP4.02□□□□□ -1.77
COPS3-213ENST00000577210 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.02□□□□□ -1.77
COPS3-213ENST00000577210 PDZD3Q86UT5 571 aa4.02□□□□□ -1.77
COPS3-213ENST00000577210 KRTAP19-1Q8IUB9 90 aa4.02□□□□□ -1.77
COPS3-213ENST00000577210 SLC43A3Q8NBI5 491 aa4.02□□□□□ -1.77
COPS3-213ENST00000577210 GATAD2BQ8WXI9 593 aa4.02□□□□□ -1.77
COPS3-213ENST00000577210 TP53INP1Q96A56 240 aa4.02□□□□□ -1.77
COPS3-213ENST00000577210 ELMO3Q96BJ8 720 aa4.02□□□□□ -1.77
COPS3-213ENST00000577210 TRIM56Q9BRZ2 755 aaKnown RBP4.02□□□□□ -1.77
COPS3-213ENST00000577210 SSBP4Q9BWG4 385 aaPredicted RBP4.02□□□□□ -1.77
COPS3-213ENST00000577210 LRRC3Q9BY71 257 aa4.02□□□□□ -1.77
COPS3-213ENST00000577210 TMPRSS13Q9BYE2 586 aa4.02□□□□□ -1.77
COPS3-213ENST00000577210 NRSN2Q9GZP1 204 aa4.02□□□□□ -1.77
COPS3-213ENST00000577210 CAPN10Q9HC96 672 aa4.02□□□□□ -1.77
COPS3-213ENST00000577210 PICK1Q9NRD5 415 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms