RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 PPP2R3BQ9Y5P8 575 aa11.22□□□□□ -0.61
NDE1-207ENST00000573203 AOX1Q06278 1338 aa11.21□□□□□ -0.61
NDE1-207ENST00000573203 A0A1B0GUL7 405 aa11.21□□□□□ -0.61
NDE1-207ENST00000573203 UBE2Q2LH0YL09 131 aa11.21□□□□□ -0.61
NDE1-207ENST00000573203 SEMA3EO15041 775 aa11.21□□□□□ -0.61
NDE1-207ENST00000573203 ZBTB7BO15156 539 aaPredicted RBP11.21□□□□□ -0.61
NDE1-207ENST00000573203 ADORA1P30542 326 aa11.21□□□□□ -0.61
NDE1-207ENST00000573203 PHKA1P46020 1223 aa11.21□□□□□ -0.61
NDE1-207ENST00000573203 ATP8B2P98198 1209 aa11.21□□□□□ -0.61
NDE1-207ENST00000573203 OS9Q13438 667 aaPredicted RBP11.21□□□□□ -0.61
NDE1-207ENST00000573203 TNFAIP1Q13829 316 aa11.21□□□□□ -0.61
NDE1-207ENST00000573203 PRKG1Q13976 671 aa11.21□□□□□ -0.61
NDE1-207ENST00000573203 ARMC9Q7Z3E5 817 aa11.21□□□□□ -0.61
NDE1-207ENST00000573203 TEKT1Q969V4 418 aa11.21□□□□□ -0.61
NDE1-207ENST00000573203 NEUROD6Q96NK8 337 aa11.21□□□□□ -0.61
NDE1-207ENST00000573203 ZNF70Q9UC06 446 aaPredicted RBP11.21□□□□□ -0.61
NDE1-207ENST00000573203 RCAN3Q9UKA8 241 aa11.21□□□□□ -0.61
NDE1-207ENST00000573203 DENND2AQ9ULE3 1009 aa11.21□□□□□ -0.61
NDE1-207ENST00000573203 FAM155AB1AL88 458 aaPredicted RBP11.2□□□□□ -0.62
NDE1-207ENST00000573203 SLC10A3P09131 477 aa11.2□□□□□ -0.62
NDE1-207ENST00000573203 LBX1P52954 281 aa11.2□□□□□ -0.62
NDE1-207ENST00000573203 MKRN3Q13064 507 aaKnown RBP11.2□□□□□ -0.62
NDE1-207ENST00000573203 RASA3Q14644 834 aa11.2□□□□□ -0.62
NDE1-207ENST00000573203 MVPQ14764 893 aaKnown RBP11.2□□□□□ -0.62
NDE1-207ENST00000573203 SUPT20HL1Q3ZLR7 823 aa11.2□□□□□ -0.62
NDE1-207ENST00000573203 GORABQ5T7V8 394 aa11.2□□□□□ -0.62
NDE1-207ENST00000573203 CCDC102BQ68D86 513 aa11.2□□□□□ -0.62
NDE1-207ENST00000573203 XAGE2Q96GT9 111 aa11.2□□□□□ -0.62
NDE1-207ENST00000573203 ZIC5Q96T25 663 aa11.2□□□□□ -0.62
NDE1-207ENST00000573203 OCEL1Q9H607 264 aa11.2□□□□□ -0.62
NDE1-207ENST00000573203 ANGEL1Q9UNK9 670 aaKnown RBP11.2□□□□□ -0.62
NDE1-207ENST00000573203 COLQQ9Y215 455 aaPredicted RBP11.2□□□□□ -0.62
NDE1-207ENST00000573203 AKAP11Q9UKA4 1901 aa11.19□□□□□ -0.62
NDE1-207ENST00000573203 TCP10L2B9ZVM9 353 aa11.19□□□□□ -0.62
NDE1-207ENST00000573203 PPP1R12BO60237 982 aaPredicted RBP11.19□□□□□ -0.62
NDE1-207ENST00000573203 SURF6O75683 361 aaKnown RBP11.19□□□□□ -0.62
NDE1-207ENST00000573203 LDHBP07195 334 aaKnown RBP11.19□□□□□ -0.62
NDE1-207ENST00000573203 HSPA8P11142 646 aaKnown RBP11.19□□□□□ -0.62
NDE1-207ENST00000573203 PLCG2P16885 1265 aa11.19□□□□□ -0.62
NDE1-207ENST00000573203 TNNI2P48788 182 aa11.19□□□□□ -0.62
NDE1-207ENST00000573203 KIF23Q02241 960 aaPredicted RBP11.19□□□□□ -0.62
NDE1-207ENST00000573203 RASAL3Q86YV0 1011 aa11.19□□□□□ -0.62
NDE1-207ENST00000573203 SSH3Q8TE77 659 aa11.19□□□□□ -0.62
NDE1-207ENST00000573203 ZDHHC15Q96MV8 337 aa11.19□□□□□ -0.62
NDE1-207ENST00000573203 MRIQ9BWK5 157 aa11.19□□□□□ -0.62
NDE1-207ENST00000573203 PRDM10Q9NQV6 1147 aa11.19□□□□□ -0.62
NDE1-207ENST00000573203 TMOD2Q9NZR1 351 aa11.19□□□□□ -0.62
NDE1-207ENST00000573203 MYH2Q9UKX2 1941 aa11.18□□□□□ -0.62
NDE1-207ENST00000573203 CA12O43570 354 aa11.18□□□□□ -0.62
NDE1-207ENST00000573203 PRDX5P30044 214 aa11.18□□□□□ -0.62
NDE1-207ENST00000573203 RASGRF1Q13972 1273 aa11.18□□□□□ -0.62
NDE1-207ENST00000573203 NBPF12Q5TAG4 269 aaPredicted RBP11.18□□□□□ -0.62
NDE1-207ENST00000573203 HHIPL2Q6UWX4 724 aa11.18□□□□□ -0.62
NDE1-207ENST00000573203 TNS4Q8IZW8 715 aa11.18□□□□□ -0.62
NDE1-207ENST00000573203 ZGPATQ8N5A5 531 aaKnown RBP11.18□□□□□ -0.62
NDE1-207ENST00000573203 PPP4R2Q9NY27 417 aa11.18□□□□□ -0.62
NDE1-207ENST00000573203 FZD1Q9UP38 647 aa11.18□□□□□ -0.62
NDE1-207ENST00000573203 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.18□□□□□ -0.62
NDE1-207ENST00000573203 SALL1Q9NSC2 1324 aa11.17□□□□□ -0.62
NDE1-207ENST00000573203 SSC5DA1L4H1 1573 aa11.17□□□□□ -0.62
NDE1-207ENST00000573203 CACNB3P54284 484 aa11.17□□□□□ -0.62
NDE1-207ENST00000573203 IFFO2Q5TF58 517 aa11.17□□□□□ -0.62
NDE1-207ENST00000573203 APOBEC3HQ6NTF7 200 aaKnown RBP11.17□□□□□ -0.62
NDE1-207ENST00000573203 CEP85Q6P2H3 762 aa11.17□□□□□ -0.62
NDE1-207ENST00000573203 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.17□□□□□ -0.62
NDE1-207ENST00000573203 TMEM39BQ9GZU3 492 aa11.17□□□□□ -0.62
NDE1-207ENST00000573203 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.17□□□□□ -0.62
NDE1-207ENST00000573203 ABCF2Q9UG63 623 aa11.17□□□□□ -0.62
NDE1-207ENST00000573203 TSKSQ9UJT2 592 aa11.17□□□□□ -0.62
NDE1-207ENST00000573203 COG6Q9Y2V7 657 aa11.17□□□□□ -0.62
NDE1-207ENST00000573203 PDS5AQ29RF7 1337 aaKnown RBP11.16□□□□□ -0.62
NDE1-207ENST00000573203 AK9Q5TCS8 1911 aa11.16□□□□□ -0.62
NDE1-207ENST00000573203 IREB2P48200 963 aaKnown RBP11.16□□□□□ -0.62
NDE1-207ENST00000573203 DIXDC1Q155Q3 683 aa11.16□□□□□ -0.62
NDE1-207ENST00000573203 MAP3K11Q16584 847 aa11.16□□□□□ -0.62
NDE1-207ENST00000573203 TNNI3KQ59H18 835 aa11.16□□□□□ -0.62
NDE1-207ENST00000573203 LDLRAD1Q5T700 205 aa11.16□□□□□ -0.62
NDE1-207ENST00000573203 SPTY2D1Q68D10 685 aaPredicted RBP11.16□□□□□ -0.62
NDE1-207ENST00000573203 DZIP1Q86YF9 867 aaKnown RBP11.16□□□□□ -0.62
NDE1-207ENST00000573203 SLC10A4Q96EP9 437 aa11.16□□□□□ -0.62
NDE1-207ENST00000573203 CSRNP1Q96S65 589 aa11.16□□□□□ -0.62
NDE1-207ENST00000573203 CHMP4BQ9H444 224 aaKnown RBP11.16□□□□□ -0.62
NDE1-207ENST00000573203 GPR108Q9NPR9 543 aa11.16□□□□□ -0.62
NDE1-207ENST00000573203 DDX19BQ9UMR2 479 aa11.16□□□□□ -0.62
NDE1-207ENST00000573203 DAGLAQ9Y4D2 1042 aa11.16□□□□□ -0.62
NDE1-207ENST00000573203 FPGT-TNNI3KV9GXZ4 949 aa11.16□□□□□ -0.62
NDE1-207ENST00000573203 USP2O75604 605 aaPredicted RBP11.15□□□□□ -0.62
NDE1-207ENST00000573203 UQCRFS1P1P0C7P4 283 aa11.15□□□□□ -0.62
NDE1-207ENST00000573203 ARID4AP29374 1257 aaPredicted RBP11.15□□□□□ -0.62
NDE1-207ENST00000573203 FKBP1CQ5VVH2 108 aa11.15□□□□□ -0.62
NDE1-207ENST00000573203 FAM83AQ86UY5 434 aa11.15□□□□□ -0.62
NDE1-207ENST00000573203 SLF2Q8IX21 1173 aa11.15□□□□□ -0.62
NDE1-207ENST00000573203 TEPSINQ96N21 525 aa11.15□□□□□ -0.62
NDE1-207ENST00000573203 NOP58Q9Y2X3 529 aaKnown RBP11.15□□□□□ -0.62
NDE1-207ENST00000573203 UNCXA6NJT0 531 aa11.14□□□□□ -0.63
NDE1-207ENST00000573203 TRPA1O75762 1119 aa11.14□□□□□ -0.63
NDE1-207ENST00000573203 RRP1P56182 461 aaKnown RBP11.14□□□□□ -0.63
NDE1-207ENST00000573203 CCDC158Q5M9N0 1113 aa11.14□□□□□ -0.63
NDE1-207ENST00000573203 TTC39AQ5SRH9 613 aa11.14□□□□□ -0.63
NDE1-207ENST00000573203 CDC42EP5Q6NZY7 148 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms