RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 WDR33Q9C0J8 1336 aaKnown RBP12.03□□□□□ -0.48
GTF3C1-212ENST00000570129 ARAP2Q8WZ64 1704 aa12.03□□□□□ -0.48
GTF3C1-212ENST00000570129 IFIT2P09913 472 aaKnown RBP12.02□□□□□ -0.49
GTF3C1-212ENST00000570129 BTDP43251 543 aa12.02□□□□□ -0.49
GTF3C1-212ENST00000570129 TTLL12Q14166 644 aaPredicted RBP12.02□□□□□ -0.49
GTF3C1-212ENST00000570129 MIGA2Q7L4E1 593 aa12.02□□□□□ -0.49
GTF3C1-212ENST00000570129 DZIP1Q86YF9 867 aaKnown RBP12.02□□□□□ -0.49
GTF3C1-212ENST00000570129 APOBEC3FQ8IUX4 373 aaKnown RBP12.02□□□□□ -0.49
GTF3C1-212ENST00000570129 CLASRPQ8N2M8 674 aaKnown RBP12.02□□□□□ -0.49
GTF3C1-212ENST00000570129 C2orf69Q8N8R5 385 aa12.02□□□□□ -0.49
GTF3C1-212ENST00000570129 JMYQ8N9B5 988 aa12.02□□□□□ -0.49
GTF3C1-212ENST00000570129 SH3RF3Q8TEJ3 882 aaPredicted RBP12.02□□□□□ -0.49
GTF3C1-212ENST00000570129 DNAJC2Q99543 621 aaKnown RBP12.02□□□□□ -0.49
GTF3C1-212ENST00000570129 LRRCC1Q9C099 1032 aa12.02□□□□□ -0.49
GTF3C1-212ENST00000570129 LRP2BPQ9P2M1 347 aa12.02□□□□□ -0.49
GTF3C1-212ENST00000570129 TSKSQ9UJT2 592 aa12.02□□□□□ -0.49
GTF3C1-212ENST00000570129 SUGT1Q9Y2Z0 365 aa12.02□□□□□ -0.49
GTF3C1-212ENST00000570129 GAKO14976 1311 aa12.02□□□□□ -0.49
GTF3C1-212ENST00000570129 GOLIM4O00461 696 aa12.01□□□□□ -0.49
GTF3C1-212ENST00000570129 WDHD1O75717 1129 aaPredicted RBP12.01□□□□□ -0.49
GTF3C1-212ENST00000570129 EVX2Q03828 476 aa12.01□□□□□ -0.49
GTF3C1-212ENST00000570129 HSP90AB4PQ58FF6 505 aa12.01□□□□□ -0.49
GTF3C1-212ENST00000570129 B4GALNT3Q6L9W6 998 aa12.01□□□□□ -0.49
GTF3C1-212ENST00000570129 MIGA1Q8NAN2 632 aa12.01□□□□□ -0.49
GTF3C1-212ENST00000570129 ZNF512BQ96KM6 892 aaPredicted RBP12.01□□□□□ -0.49
GTF3C1-212ENST00000570129 CHMP4BQ9H444 224 aaKnown RBP12.01□□□□□ -0.49
GTF3C1-212ENST00000570129 ANGEL1Q9UNK9 670 aaKnown RBP12.01□□□□□ -0.49
GTF3C1-212ENST00000570129 PDS5AQ29RF7 1337 aaKnown RBP12.01□□□□□ -0.49
GTF3C1-212ENST00000570129 AKAP11Q9UKA4 1901 aa12□□□□□ -0.49
GTF3C1-212ENST00000570129 GPR75-ASB3A0A0A6YYF3 556 aa12□□□□□ -0.49
GTF3C1-212ENST00000570129 DDTLA6NHG4 134 aaPredicted RBP12□□□□□ -0.49
GTF3C1-212ENST00000570129 FAM196BA6NMK8 535 aa12□□□□□ -0.49
GTF3C1-212ENST00000570129 ZBTB22O15209 634 aa12□□□□□ -0.49
GTF3C1-212ENST00000570129 IDH1O75874 414 aaKnown RBP12□□□□□ -0.49
GTF3C1-212ENST00000570129 CYP7A1P22680 504 aa12□□□□□ -0.49
GTF3C1-212ENST00000570129 GJA5P36382 358 aa12□□□□□ -0.49
GTF3C1-212ENST00000570129 RGS3P49796 1198 aa12□□□□□ -0.49
GTF3C1-212ENST00000570129 ZNF157P51786 506 aaPredicted RBP12□□□□□ -0.49
GTF3C1-212ENST00000570129 PICALMQ13492 652 aa12□□□□□ -0.49
GTF3C1-212ENST00000570129 SLC4A8Q2Y0W8 1093 aa12□□□□□ -0.49
GTF3C1-212ENST00000570129 ANKRD45Q5TZF3 282 aa12□□□□□ -0.49
GTF3C1-212ENST00000570129 FAM163AQ96GL9 167 aaPredicted RBP12□□□□□ -0.49
GTF3C1-212ENST00000570129 MROH7-TTC4A0A0A0MT08 1334 aa12□□□□□ -0.49
GTF3C1-212ENST00000570129 SMIM22K7EJ46 135 aa11.99□□□□□ -0.49
GTF3C1-212ENST00000570129 MYO1BO43795 1136 aa11.99□□□□□ -0.49
GTF3C1-212ENST00000570129 ATP5JP18859 108 aa11.99□□□□□ -0.49
GTF3C1-212ENST00000570129 MMP14P50281 582 aa11.99□□□□□ -0.49
GTF3C1-212ENST00000570129 KIF23Q02241 960 aaPredicted RBP11.99□□□□□ -0.49
GTF3C1-212ENST00000570129 RRP1BQ14684 758 aaKnown RBP11.99□□□□□ -0.49
GTF3C1-212ENST00000570129 LDLRAD1Q5T700 205 aa11.99□□□□□ -0.49
GTF3C1-212ENST00000570129 SPTY2D1Q68D10 685 aaPredicted RBP11.99□□□□□ -0.49
GTF3C1-212ENST00000570129 RGMBQ6NW40 437 aa11.99□□□□□ -0.49
GTF3C1-212ENST00000570129 SKAP1Q86WV1 359 aa11.99□□□□□ -0.49
GTF3C1-212ENST00000570129 RASAL3Q86YV0 1011 aa11.99□□□□□ -0.49
GTF3C1-212ENST00000570129 MAGEB6Q8N7X4 407 aa11.99□□□□□ -0.49
GTF3C1-212ENST00000570129 AATFQ9NY61 560 aaKnown RBP eCLIP11.99□□□□□ -0.49
GTF3C1-212ENST00000570129 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.99□□□□□ -0.49
GTF3C1-212ENST00000570129 MYH13Q9UKX3 1938 aa11.98□□□□□ -0.49
GTF3C1-212ENST00000570129 TRPM7Q96QT4 1865 aa11.98□□□□□ -0.49
GTF3C1-212ENST00000570129 MYO5AQ9Y4I1 1855 aaKnown RBP11.98□□□□□ -0.49
GTF3C1-212ENST00000570129 FOXN1O15353 648 aa11.98□□□□□ -0.49
GTF3C1-212ENST00000570129 HSPA1AP0DMV8 641 aaKnown RBP11.98□□□□□ -0.49
GTF3C1-212ENST00000570129 HSPA1BP0DMV9 641 aaKnown RBP11.98□□□□□ -0.49
GTF3C1-212ENST00000570129 HDAC1Q13547 482 aaPredicted RBP11.98□□□□□ -0.49
GTF3C1-212ENST00000570129 SHROOM1Q2M3G4 852 aaPredicted RBP11.98□□□□□ -0.49
GTF3C1-212ENST00000570129 NAA16Q6N069 864 aaPredicted RBP11.98□□□□□ -0.49
GTF3C1-212ENST00000570129 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.98□□□□□ -0.49
GTF3C1-212ENST00000570129 ZKSCAN4Q969J2 545 aaPredicted RBP11.98□□□□□ -0.49
GTF3C1-212ENST00000570129 MAST3O60307 1309 aa11.97□□□□□ -0.49
GTF3C1-212ENST00000570129 TCRBV5S4A2TA0A5A2 114 aa11.97□□□□□ -0.49
GTF3C1-212ENST00000570129 PDE6AP16499 860 aa11.97□□□□□ -0.49
GTF3C1-212ENST00000570129 INPP5BP32019 993 aa11.97□□□□□ -0.49
GTF3C1-212ENST00000570129 JAG1P78504 1218 aa11.97□□□□□ -0.49
GTF3C1-212ENST00000570129 CCDC84Q86UT8 332 aaPredicted RBP11.97□□□□□ -0.49
GTF3C1-212ENST00000570129 MAPKAPK5Q8IW41 473 aa11.97□□□□□ -0.49
GTF3C1-212ENST00000570129 ZGPATQ8N5A5 531 aaKnown RBP11.97□□□□□ -0.49
GTF3C1-212ENST00000570129 FAM151AQ8WW52 585 aa11.97□□□□□ -0.49
GTF3C1-212ENST00000570129 CSRNP1Q96S65 589 aa11.97□□□□□ -0.49
GTF3C1-212ENST00000570129 HAUS7Q99871 368 aa11.97□□□□□ -0.49
GTF3C1-212ENST00000570129 LNPKQ9C0E8 428 aa11.97□□□□□ -0.49
GTF3C1-212ENST00000570129 ELP3Q9H9T3 547 aa11.97□□□□□ -0.49
GTF3C1-212ENST00000570129 WBP1LQ9NX94 342 aa11.97□□□□□ -0.49
GTF3C1-212ENST00000570129 SAP30BPQ9UHR5 308 aaKnown RBP11.97□□□□□ -0.49
GTF3C1-212ENST00000570129 RFX7Q2KHR2 1363 aa11.96□□□□□ -0.49
GTF3C1-212ENST00000570129 SALL3Q9BXA9 1300 aa11.96□□□□□ -0.49
GTF3C1-212ENST00000570129 PRKAB2O43741 272 aa11.96□□□□□ -0.49
GTF3C1-212ENST00000570129 SLC10A3P09131 477 aa11.96□□□□□ -0.49
GTF3C1-212ENST00000570129 TEX11Q8IYF3 940 aa11.96□□□□□ -0.49
GTF3C1-212ENST00000570129 PI4K2BQ8TCG2 481 aa11.96□□□□□ -0.49
GTF3C1-212ENST00000570129 TGFBRAP1Q8WUH2 860 aa11.96□□□□□ -0.49
GTF3C1-212ENST00000570129 R3HDMLQ9H3Y0 253 aa11.96□□□□□ -0.49
GTF3C1-212ENST00000570129 ECHDC1Q9NTX5 307 aa11.96□□□□□ -0.49
GTF3C1-212ENST00000570129 PAG1Q9NWQ8 432 aa11.96□□□□□ -0.49
GTF3C1-212ENST00000570129 ZNF532Q9HCE3 1301 aa11.95□□□□□ -0.5
GTF3C1-212ENST00000570129 NPM3O75607 178 aaKnown RBP11.95□□□□□ -0.5
GTF3C1-212ENST00000570129 PDE4AP27815 886 aa11.95□□□□□ -0.5
GTF3C1-212ENST00000570129 PPP4CP60510 307 aa11.95□□□□□ -0.5
GTF3C1-212ENST00000570129 SUPT20HL1Q3ZLR7 823 aa11.95□□□□□ -0.5
GTF3C1-212ENST00000570129 SLC9C2Q5TAH2 1124 aa11.95□□□□□ -0.5
GTF3C1-212ENST00000570129 FKBP1CQ5VVH2 108 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms