RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	PDRG1	Q9NUG6	133 aa		13.93	□□□□□ -0.18
SPG7-222	ENST00000569820		U3KPZ7	1027 aa	Predicted RBP	13.93	□□□□□ -0.18
SPG7-222	ENST00000569820	ELP1	O95163	1332 aa		13.93	□□□□□ -0.18
SPG7-222	ENST00000569820		M0R2C6	588 aa		13.93	□□□□□ -0.18
SPG7-222	ENST00000569820	IGHMBP2	P38935	993 aa	Known RBP	13.93	□□□□□ -0.18
SPG7-222	ENST00000569820	SF3B3	Q15393	1217 aa	Known RBP	13.93	□□□□□ -0.18
SPG7-222	ENST00000569820	CCDC144B	Q3MJ40	725 aa		13.93	□□□□□ -0.18
SPG7-222	ENST00000569820	CCDC144CP	Q8IYA2	1237 aa		13.93	□□□□□ -0.18
SPG7-222	ENST00000569820	ARHGEF1	Q92888	912 aa	Known RBP	13.93	□□□□□ -0.18
SPG7-222	ENST00000569820	LRRC4B	Q9NT99	713 aa		13.93	□□□□□ -0.18
SPG7-222	ENST00000569820	DACT1	Q9NYF0	836 aa		13.93	□□□□□ -0.18
SPG7-222	ENST00000569820	ZPR1	O75312	459 aa		13.92	□□□□□ -0.18
SPG7-222	ENST00000569820	CDC25B	P30305	580 aa		13.92	□□□□□ -0.18
SPG7-222	ENST00000569820	SLC10A5	Q5PT55	438 aa		13.92	□□□□□ -0.18
SPG7-222	ENST00000569820	OSBP2	Q969R2	916 aa		13.92	□□□□□ -0.18
SPG7-222	ENST00000569820	NOL10	Q9BSC4	688 aa	Known RBP	13.92	□□□□□ -0.18
SPG7-222	ENST00000569820	DSCC1	Q9BVC3	393 aa		13.92	□□□□□ -0.18
SPG7-222	ENST00000569820	ST7	Q9NRC1	585 aa		13.92	□□□□□ -0.18
SPG7-222	ENST00000569820	GOLGA6L4	A6NEF3	574 aa		13.92	□□□□□ -0.18
SPG7-222	ENST00000569820	SNAP23	O00161	211 aa		13.92	□□□□□ -0.18
SPG7-222	ENST00000569820	NEMF	O60524	1076 aa		13.92	□□□□□ -0.18
SPG7-222	ENST00000569820	ZFY	P08048	801 aa	Predicted RBP	13.92	□□□□□ -0.18
SPG7-222	ENST00000569820	SLC5A1	P13866	664 aa		13.92	□□□□□ -0.18
SPG7-222	ENST00000569820	PSMA5	P28066	241 aa		13.92	□□□□□ -0.18
SPG7-222	ENST00000569820	ZNF165	P49910	485 aa		13.92	□□□□□ -0.18
SPG7-222	ENST00000569820	CTR9	Q6PD62	1173 aa		13.92	□□□□□ -0.18
SPG7-222	ENST00000569820	NYAP1	Q6ZVC0	841 aa		13.92	□□□□□ -0.18
SPG7-222	ENST00000569820	LRRC8A	Q8IWT6	810 aa		13.92	□□□□□ -0.18
SPG7-222	ENST00000569820	DDX19A	Q9NUU7	478 aa	Known RBP	13.92	□□□□□ -0.18
SPG7-222	ENST00000569820	USP27X	A6NNY8	438 aa		13.91	□□□□□ -0.18
SPG7-222	ENST00000569820	CYP21A2	P08686	494 aa		13.91	□□□□□ -0.18
SPG7-222	ENST00000569820	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.91	□□□□□ -0.18
SPG7-222	ENST00000569820	ZSCAN31	Q96LW9	406 aa	Predicted RBP	13.91	□□□□□ -0.18
SPG7-222	ENST00000569820	SETDB2	Q96T68	719 aa		13.91	□□□□□ -0.18
SPG7-222	ENST00000569820	CDC5L	Q99459	802 aa	Known RBP	13.91	□□□□□ -0.18
SPG7-222	ENST00000569820	NYX	Q9GZU5	481 aa		13.91	□□□□□ -0.18
SPG7-222	ENST00000569820	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.91	□□□□□ -0.18
SPG7-222	ENST00000569820	DTNB	O60941	627 aa		13.91	□□□□□ -0.18
SPG7-222	ENST00000569820	SLU7	O95391	586 aa	Known RBP	13.91	□□□□□ -0.18
SPG7-222	ENST00000569820	UQCRFS1P1	P0C7P4	283 aa		13.91	□□□□□ -0.18
SPG7-222	ENST00000569820	HSPD1	P10809	573 aa	Known RBP	13.91	□□□□□ -0.18
SPG7-222	ENST00000569820	RPS6KB1	P23443	525 aa		13.91	□□□□□ -0.18
SPG7-222	ENST00000569820	TNNT3	P45378	269 aa	Predicted RBP	13.91	□□□□□ -0.18
SPG7-222	ENST00000569820	CHRND	Q07001	517 aa		13.91	□□□□□ -0.18
SPG7-222	ENST00000569820	BLOC1S2	Q6QNY1	142 aa		13.91	□□□□□ -0.18
SPG7-222	ENST00000569820	CYP2C19	P33261	490 aa		13.9	□□□□□ -0.18
SPG7-222	ENST00000569820	KRT32	Q14532	448 aa		13.9	□□□□□ -0.18
SPG7-222	ENST00000569820	BMS1	Q14692	1282 aa	Known RBP	13.9	□□□□□ -0.18
SPG7-222	ENST00000569820	RBM43	Q6ZSC3	357 aa	Known RBP	13.9	□□□□□ -0.18
SPG7-222	ENST00000569820	FAM196A	Q6ZSG2	479 aa		13.9	□□□□□ -0.18
SPG7-222	ENST00000569820	APPBP2	Q92624	585 aa		13.9	□□□□□ -0.18
SPG7-222	ENST00000569820	DNAJC25	Q9H1X3	360 aa		13.9	□□□□□ -0.18
SPG7-222	ENST00000569820	CLSTN2	Q9H4D0	955 aa		13.9	□□□□□ -0.18
SPG7-222	ENST00000569820	PIH1D3	Q9NQM4	214 aa	Known RBP	13.9	□□□□□ -0.18
SPG7-222	ENST00000569820	FOXP2	O15409	715 aa		13.9	□□□□□ -0.18
SPG7-222	ENST00000569820	KRT27	Q7Z3Y8	459 aa		13.9	□□□□□ -0.18
SPG7-222	ENST00000569820	CHMP4C	Q96CF2	233 aa		13.9	□□□□□ -0.18
SPG7-222	ENST00000569820	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	13.9	□□□□□ -0.18
SPG7-222	ENST00000569820	ZNF446	Q9NWS9	450 aa		13.9	□□□□□ -0.18
SPG7-222	ENST00000569820	SKIL	P12757	684 aa		13.89	□□□□□ -0.19
SPG7-222	ENST00000569820	TTF1	Q15361	905 aa	Predicted RBP	13.89	□□□□□ -0.19
SPG7-222	ENST00000569820	LARP1B	Q659C4	914 aa	Known RBP	13.89	□□□□□ -0.19
SPG7-222	ENST00000569820	FERMT3	Q86UX7	667 aa		13.89	□□□□□ -0.19
SPG7-222	ENST00000569820	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.89	□□□□□ -0.19
SPG7-222	ENST00000569820	ANKRD18A	Q8IVF6	992 aa		13.89	□□□□□ -0.19
SPG7-222	ENST00000569820	GOLGA6L19	H0YKK7	550 aa		13.89	□□□□□ -0.19
SPG7-222	ENST00000569820	CAVIN2	O95810	425 aa		13.89	□□□□□ -0.19
SPG7-222	ENST00000569820	ADD2	P35612	726 aa		13.89	□□□□□ -0.19
SPG7-222	ENST00000569820	ST3GAL1	Q11201	340 aa		13.89	□□□□□ -0.19
SPG7-222	ENST00000569820	RASGRF1	Q13972	1273 aa		13.89	□□□□□ -0.19
SPG7-222	ENST00000569820	WASHC4	Q2M389	1173 aa		13.89	□□□□□ -0.19
SPG7-222	ENST00000569820	STOX1	Q6ZVD7	989 aa		13.89	□□□□□ -0.19
SPG7-222	ENST00000569820	ZBTB9	Q96C00	473 aa		13.89	□□□□□ -0.19
SPG7-222	ENST00000569820	TCEANC2	Q96MN5	208 aa		13.89	□□□□□ -0.19
SPG7-222	ENST00000569820	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.89	□□□□□ -0.19	2e-6	■■■□□ 15.8
SPG7-222	ENST00000569820	SCAND2P	Q9GZW5	306 aa	Predicted RBP	13.89	□□□□□ -0.19
SPG7-222	ENST00000569820	PUS7L	Q9H0K6	701 aa	Known RBP	13.89	□□□□□ -0.19
SPG7-222	ENST00000569820	RFC4	P35249	363 aa		13.88	□□□□□ -0.19
SPG7-222	ENST00000569820	TOB2	Q14106	344 aa	Predicted RBP	13.88	□□□□□ -0.19
SPG7-222	ENST00000569820	TRAPPC3L	Q5T215	181 aa		13.88	□□□□□ -0.19
SPG7-222	ENST00000569820	CDC37L1	Q7L3B6	337 aa		13.88	□□□□□ -0.19
SPG7-222	ENST00000569820	SPATA32	Q96LK8	384 aa		13.88	□□□□□ -0.19
SPG7-222	ENST00000569820	MYCBP	Q99417	103 aa	Predicted RBP	13.88	□□□□□ -0.19
SPG7-222	ENST00000569820	BSDC1	Q9NW68	430 aa	Predicted RBP	13.88	□□□□□ -0.19
SPG7-222	ENST00000569820	TPCN1	Q9ULQ1	816 aa		13.88	□□□□□ -0.19
SPG7-222	ENST00000569820		A0A0G2JLW4	131 aa		13.87	□□□□□ -0.19
SPG7-222	ENST00000569820	KIF2A	O00139	706 aa	Predicted RBP	13.87	□□□□□ -0.19
SPG7-222	ENST00000569820	NOP2	P46087	812 aa	Known RBP	13.87	□□□□□ -0.19
SPG7-222	ENST00000569820	HNRNPH2	P55795	449 aa	Known RBP	13.87	□□□□□ -0.19
SPG7-222	ENST00000569820	ARID5B	Q14865	1188 aa		13.87	□□□□□ -0.19
SPG7-222	ENST00000569820	ME3	Q16798	604 aa		13.87	□□□□□ -0.19
SPG7-222	ENST00000569820	FAM173B	Q6P4H8	233 aa		13.87	□□□□□ -0.19
SPG7-222	ENST00000569820	SARM1	Q6SZW1	724 aa		13.87	□□□□□ -0.19
SPG7-222	ENST00000569820	SPATA5	Q8NB90	893 aa		13.87	□□□□□ -0.19
SPG7-222	ENST00000569820	CELF1	Q92879	486 aa	Known RBP	13.87	□□□□□ -0.19
SPG7-222	ENST00000569820	MRFAP1L1	Q96HT8	127 aa		13.87	□□□□□ -0.19
SPG7-222	ENST00000569820	NEK1	Q96PY6	1258 aa		13.87	□□□□□ -0.19
SPG7-222	ENST00000569820	CARMIL3	Q8ND23	1372 aa		13.87	□□□□□ -0.19
SPG7-222	ENST00000569820	LOC102724159	A0A0B4J2E5	919 aa		13.87	□□□□□ -0.19
SPG7-222	ENST00000569820	NPHP1	O15259	732 aa		13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms