RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 MASTLQ96GX5 879 aa8.34□□□□□ -1.08
SMG1-215ENST00000568239 NBPF3Q9H094 633 aa8.34□□□□□ -1.08
SMG1-215ENST00000568239 NCLP19338 710 aaKnown RBP8.33□□□□□ -1.08
SMG1-215ENST00000568239 SCRN1Q12765 414 aa8.33□□□□□ -1.08
SMG1-215ENST00000568239 SLC4A8Q2Y0W8 1093 aa8.33□□□□□ -1.08
SMG1-215ENST00000568239 SPTY2D1Q68D10 685 aaPredicted RBP8.33□□□□□ -1.08
SMG1-215ENST00000568239 MFSD6Q6ZSS7 791 aa8.33□□□□□ -1.08
SMG1-215ENST00000568239 C2CD5Q86YS7 1000 aa8.33□□□□□ -1.08
SMG1-215ENST00000568239 SP8Q8IXZ3 490 aa8.33□□□□□ -1.08
SMG1-215ENST00000568239 MPNDQ8N594 471 aa8.33□□□□□ -1.08
SMG1-215ENST00000568239 TDRD7Q8NHU6 1098 aaKnown RBP8.33□□□□□ -1.08
SMG1-215ENST00000568239 GTF3C6Q969F1 213 aa8.33□□□□□ -1.08
SMG1-215ENST00000568239 RIOK1Q9BRS2 568 aaKnown RBP8.33□□□□□ -1.08
SMG1-215ENST00000568239 NCOA5Q9HCD5 579 aaKnown RBP8.33□□□□□ -1.08
SMG1-215ENST00000568239 ATP6V0A2Q9Y487 856 aa8.33□□□□□ -1.08
SMG1-215ENST00000568239 H0YIN7 160 aa8.33□□□□□ -1.08
SMG1-215ENST00000568239 JAK2O60674 1132 aa8.33□□□□□ -1.08
SMG1-215ENST00000568239 DIXDC1Q155Q3 683 aa8.33□□□□□ -1.08
SMG1-215ENST00000568239 DPP8Q6V1X1 898 aaPredicted RBP8.33□□□□□ -1.08
SMG1-215ENST00000568239 MB21D2Q8IYB1 491 aaPredicted RBP8.33□□□□□ -1.08
SMG1-215ENST00000568239 FAM184AQ8NB25 1140 aa8.33□□□□□ -1.08
SMG1-215ENST00000568239 ZC3H12CQ9C0D7 883 aaKnown RBP8.33□□□□□ -1.08
SMG1-215ENST00000568239 NEDD4P46934 1319 aa8.33□□□□□ -1.08
SMG1-215ENST00000568239 ANKRD31Q8N7Z5 1873 aa8.32□□□□□ -1.08
SMG1-215ENST00000568239 KLF18A0A0U1RQI7 1052 aa8.32□□□□□ -1.08
SMG1-215ENST00000568239 KDM4AO75164 1064 aa8.32□□□□□ -1.08
SMG1-215ENST00000568239 PRPF40AO75400 957 aaKnown RBP8.32□□□□□ -1.08
SMG1-215ENST00000568239 CHRNA5P30532 468 aa8.32□□□□□ -1.08
SMG1-215ENST00000568239 FOSBP53539 338 aa8.32□□□□□ -1.08
SMG1-215ENST00000568239 GSE1Q14687 1217 aa8.32□□□□□ -1.08
SMG1-215ENST00000568239 ALX1Q15699 326 aa8.32□□□□□ -1.08
SMG1-215ENST00000568239 TMC4Q7Z404 712 aa8.32□□□□□ -1.08
SMG1-215ENST00000568239 IRS2Q9Y4H2 1338 aa8.32□□□□□ -1.08
SMG1-215ENST00000568239 ZSCAN22P10073 491 aaPredicted RBP8.32□□□□□ -1.08
SMG1-215ENST00000568239 DEKP35659 375 aaKnown RBP8.32□□□□□ -1.08
SMG1-215ENST00000568239 ANTXR2P58335 489 aa8.32□□□□□ -1.08
SMG1-215ENST00000568239 GRIK5Q16478 980 aa8.32□□□□□ -1.08
SMG1-215ENST00000568239 AKNAD1Q5T1N1 836 aa8.32□□□□□ -1.08
SMG1-215ENST00000568239 NFXL1Q6ZNB6 911 aa8.32□□□□□ -1.08
SMG1-215ENST00000568239 CYB5R4Q7L1T6 521 aa8.32□□□□□ -1.08
SMG1-215ENST00000568239 FERMT3Q86UX7 667 aa8.32□□□□□ -1.08
SMG1-215ENST00000568239 NKX2-3Q8TAU0 364 aa8.32□□□□□ -1.08
SMG1-215ENST00000568239 ZKSCAN3Q9BRR0 538 aa8.32□□□□□ -1.08
SMG1-215ENST00000568239 DDX49Q9Y6V7 483 aaKnown RBP8.32□□□□□ -1.08
SMG1-215ENST00000568239 CACNA1SQ13698 1873 aa8.31□□□□□ -1.08
SMG1-215ENST00000568239 CYP2D7A0A087X1C5 515 aa8.31□□□□□ -1.08
SMG1-215ENST00000568239 GOLGA8BA8MQT2 603 aa8.31□□□□□ -1.08
SMG1-215ENST00000568239 PDIA3P30101 505 aaKnown RBP8.31□□□□□ -1.08
SMG1-215ENST00000568239 GTF2IP78347 998 aa8.31□□□□□ -1.08
SMG1-215ENST00000568239 PPARAQ07869 468 aa8.31□□□□□ -1.08
SMG1-215ENST00000568239 DOK7Q18PE1 504 aa8.31□□□□□ -1.08
SMG1-215ENST00000568239 MFSD14BQ5SR56 506 aa8.31□□□□□ -1.08
SMG1-215ENST00000568239 CRNKL1Q9BZJ0 848 aaKnown RBP8.31□□□□□ -1.08
SMG1-215ENST00000568239 GDPD2Q9HCC8 539 aa8.31□□□□□ -1.08
SMG1-215ENST00000568239 BAZ2AQ9UIF9 1905 aaKnown RBP8.31□□□□□ -1.08
SMG1-215ENST00000568239 PDS5AQ29RF7 1337 aaKnown RBP8.31□□□□□ -1.08
SMG1-215ENST00000568239 CCDC88AQ3V6T2 1871 aa8.31□□□□□ -1.08
SMG1-215ENST00000568239 F8W031 263 aaPredicted RBP8.31□□□□□ -1.08
SMG1-215ENST00000568239 SMIM22K7EJ46 135 aa8.31□□□□□ -1.08
SMG1-215ENST00000568239 PFKFB2O60825 505 aa8.31□□□□□ -1.08
SMG1-215ENST00000568239 RXRAP19793 462 aa8.31□□□□□ -1.08
SMG1-215ENST00000568239 PDCP20941 246 aa8.31□□□□□ -1.08
SMG1-215ENST00000568239 NOL10Q9BSC4 688 aaKnown RBP8.31□□□□□ -1.08
SMG1-215ENST00000568239 AGXT2Q9BYV1 514 aa8.31□□□□□ -1.08
SMG1-215ENST00000568239 ZSWIM5Q9P217 1185 aa8.31□□□□□ -1.08
SMG1-215ENST00000568239 TCHHQ07283 1943 aa8.31□□□□□ -1.08
SMG1-215ENST00000568239 USP17L12C9JPN9 530 aa8.31□□□□□ -1.08
SMG1-215ENST00000568239 USP17L21D6R901 530 aa8.31□□□□□ -1.08
SMG1-215ENST00000568239 H3BQV1 296 aa8.31□□□□□ -1.08
SMG1-215ENST00000568239 CPLX1O14810 134 aa8.31□□□□□ -1.08
SMG1-215ENST00000568239 IFIT3O14879 490 aaKnown RBP8.31□□□□□ -1.08
SMG1-215ENST00000568239 PRDM1O75626 825 aa8.31□□□□□ -1.08
SMG1-215ENST00000568239 F13A1P00488 732 aa8.31□□□□□ -1.08
SMG1-215ENST00000568239 USP5P45974 858 aa8.31□□□□□ -1.08
SMG1-215ENST00000568239 TMEM67Q5HYA8 995 aa8.31□□□□□ -1.08
SMG1-215ENST00000568239 IFFO2Q5TF58 517 aa8.31□□□□□ -1.08
SMG1-215ENST00000568239 CLEC17AQ6ZS10 378 aa8.31□□□□□ -1.08
SMG1-215ENST00000568239 CCDC144CPQ8IYA2 1237 aa8.31□□□□□ -1.08
SMG1-215ENST00000568239 ZNF274Q96GC6 653 aaPredicted RBP8.31□□□□□ -1.08
SMG1-215ENST00000568239 KRT23Q9C075 422 aa8.31□□□□□ -1.08
SMG1-215ENST00000568239 CNNM2Q9H8M5 875 aa8.31□□□□□ -1.08
SMG1-215ENST00000568239 BRPF3Q9ULD4 1205 aa8.31□□□□□ -1.08
SMG1-215ENST00000568239 ANGEL1Q9UNK9 670 aaKnown RBP8.31□□□□□ -1.08
SMG1-215ENST00000568239 UTRNP46939 3433 aa8.3□□□□□ -1.08
SMG1-215ENST00000568239 ZMYM6O95789 1325 aa8.3□□□□□ -1.08
SMG1-215ENST00000568239 IL1R1P14778 569 aa8.3□□□□□ -1.08
SMG1-215ENST00000568239 PTMSP20962 102 aa8.3□□□□□ -1.08
SMG1-215ENST00000568239 C15orf52Q6ZUT6 534 aaKnown RBP8.3□□□□□ -1.08
SMG1-215ENST00000568239 MICU3Q86XE3 530 aa8.3□□□□□ -1.08
SMG1-215ENST00000568239 RNF41Q9H4P4 317 aaPredicted RBP8.3□□□□□ -1.08
SMG1-215ENST00000568239 MCM9Q9NXL9 1143 aa8.3□□□□□ -1.08
SMG1-215ENST00000568239 MTMR6Q9Y217 621 aa8.3□□□□□ -1.08
SMG1-215ENST00000568239 CHD4Q14839 1912 aa8.3□□□□□ -1.08
SMG1-215ENST00000568239 ERICH2A1L162 156 aa8.3□□□□□ -1.08
SMG1-215ENST00000568239 PTPDC1A2A3K4 754 aa8.3□□□□□ -1.08
SMG1-215ENST00000568239 RANBP6O60518 1105 aaKnown RBP8.3□□□□□ -1.08
SMG1-215ENST00000568239 BAG3O95817 575 aa8.3□□□□□ -1.08
SMG1-215ENST00000568239 GSTO1P78417 241 aa8.3□□□□□ -1.08
SMG1-215ENST00000568239 CDC37L1Q7L3B6 337 aa8.3□□□□□ -1.08
SMG1-215ENST00000568239 MYL10Q9BUA6 226 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms