RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 GTF3C3Q9Y5Q9 886 aa21.79■■□□□ 1.08
COMMD4-222ENST00000568034 RGS3P49796 1198 aa21.78■■□□□ 1.08
COMMD4-222ENST00000568034 UBE3CQ15386 1083 aa21.78■■□□□ 1.08
COMMD4-222ENST00000568034 CDC42EP5Q6NZY7 148 aa21.78■■□□□ 1.08
COMMD4-222ENST00000568034 FSD1Q9BTV5 496 aa21.78■■□□□ 1.08
COMMD4-222ENST00000568034 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.78■■□□□ 1.08
COMMD4-222ENST00000568034 PITPNM2Q9BZ72 1349 aa21.78■■□□□ 1.08
COMMD4-222ENST00000568034 PPP4CP60510 307 aa21.77■■□□□ 1.08
COMMD4-222ENST00000568034 MAP1SQ66K74 1059 aaPredicted RBP21.77■■□□□ 1.08
COMMD4-222ENST00000568034 CNTROBQ8N137 903 aa21.77■■□□□ 1.08
COMMD4-222ENST00000568034 POLR2AP24928 1970 aaKnown RBP21.77■■□□□ 1.08
COMMD4-222ENST00000568034 TRIM6-TRIM34B2RNG4 842 aa21.76■■□□□ 1.07
COMMD4-222ENST00000568034 RNF113AO15541 343 aaKnown RBP21.76■■□□□ 1.07
COMMD4-222ENST00000568034 SDSP20132 328 aa21.76■■□□□ 1.07
COMMD4-222ENST00000568034 CHADLQ6NUI6 762 aa21.76■■□□□ 1.07
COMMD4-222ENST00000568034 MIGA1Q8NAN2 632 aa21.76■■□□□ 1.07
COMMD4-222ENST00000568034 RBM46Q8TBY0 533 aaKnown RBP21.76■■□□□ 1.07
COMMD4-222ENST00000568034 RIOK1Q9BRS2 568 aaKnown RBP21.76■■□□□ 1.07
COMMD4-222ENST00000568034 AATFQ9NY61 560 aaKnown RBP eCLIP21.76■■□□□ 1.07
COMMD4-222ENST00000568034 SCAF8Q9UPN6 1271 aaKnown RBP21.76■■□□□ 1.07
COMMD4-222ENST00000568034 CLEC11AQ9Y240 323 aa21.76■■□□□ 1.07
COMMD4-222ENST00000568034 AK9Q5TCS8 1911 aa21.76■■□□□ 1.07
COMMD4-222ENST00000568034 MYO1BO43795 1136 aa21.75■■□□□ 1.07
COMMD4-222ENST00000568034 TOMM70O94826 608 aa21.75■■□□□ 1.07
COMMD4-222ENST00000568034 CACNB3P54284 484 aa21.75■■□□□ 1.07
COMMD4-222ENST00000568034 C1QTNF8P60827 252 aa21.75■■□□□ 1.07
COMMD4-222ENST00000568034 DYNLL1P63167 89 aaKnown RBP21.75■■□□□ 1.07
COMMD4-222ENST00000568034 ZSCAN25Q6NSZ9 544 aa21.75■■□□□ 1.07
COMMD4-222ENST00000568034 RILPL2Q969X0 211 aa21.75■■□□□ 1.07
COMMD4-222ENST00000568034 USP40Q9NVE5 1235 aa21.75■■□□□ 1.07
COMMD4-222ENST00000568034 WDHD1O75717 1129 aaPredicted RBP21.74■■□□□ 1.07
COMMD4-222ENST00000568034 ZFYP08048 801 aaPredicted RBP21.74■■□□□ 1.07
COMMD4-222ENST00000568034 NFIAQ12857 509 aa21.74■■□□□ 1.07
COMMD4-222ENST00000568034 SH3RF3Q8TEJ3 882 aaPredicted RBP21.74■■□□□ 1.07
COMMD4-222ENST00000568034 OSBP2Q969R2 916 aa21.74■■□□□ 1.07
COMMD4-222ENST00000568034 PUS7LQ9H0K6 701 aaKnown RBP21.74■■□□□ 1.07
COMMD4-222ENST00000568034 CDK5RAP2Q96SN8 1893 aa21.73■■□□□ 1.07
COMMD4-222ENST00000568034 ADM5C9JUS6 153 aa21.73■■□□□ 1.07
COMMD4-222ENST00000568034 ZMYM1Q5SVZ6 1142 aa21.73■■□□□ 1.07
COMMD4-222ENST00000568034 APOBEC3FQ8IUX4 373 aaKnown RBP21.73■■□□□ 1.07
COMMD4-222ENST00000568034 APPBP2Q92624 585 aa21.73■■□□□ 1.07
COMMD4-222ENST00000568034 DCPSQ96C86 337 aaKnown RBP21.73■■□□□ 1.07
COMMD4-222ENST00000568034 GLIS2Q9BZE0 524 aaPredicted RBP21.73■■□□□ 1.07
COMMD4-222ENST00000568034 VEZTQ9HBM0 779 aa21.73■■□□□ 1.07
COMMD4-222ENST00000568034 CNTNAP1P78357 1384 aa21.73■■□□□ 1.07
COMMD4-222ENST00000568034 ITGBL1O95965 494 aaPredicted RBP21.72■■□□□ 1.07
COMMD4-222ENST00000568034 BMP2KLQ5H9B9 411 aa21.72■■□□□ 1.07
COMMD4-222ENST00000568034 FKBP1CQ5VVH2 108 aa21.72■■□□□ 1.07
COMMD4-222ENST00000568034 DLK2Q6UY11 383 aa21.72■■□□□ 1.07
COMMD4-222ENST00000568034 KRT26Q7Z3Y9 468 aa21.72■■□□□ 1.07
COMMD4-222ENST00000568034 TICAM2Q86XR7 235 aa21.72■■□□□ 1.07
COMMD4-222ENST00000568034 LCORLQ8N3X6 602 aa21.72■■□□□ 1.07
COMMD4-222ENST00000568034 SMC1BQ8NDV3 1235 aa21.72■■□□□ 1.07
COMMD4-222ENST00000568034 IDI2Q9BXS1 227 aa21.72■■□□□ 1.07
COMMD4-222ENST00000568034 DDX4Q9NQI0 724 aaKnown RBP21.72■■□□□ 1.07
COMMD4-222ENST00000568034 FAM198AQ9UFP1 575 aa21.72■■□□□ 1.07
COMMD4-222ENST00000568034 FOCADQ5VW36 1801 aa21.71■■□□□ 1.07
COMMD4-222ENST00000568034 MAGEB6P1A0A0J9YX57 407 aa21.71■■□□□ 1.07
COMMD4-222ENST00000568034 TCP10L2B9ZVM9 353 aa21.71■■□□□ 1.07
COMMD4-222ENST00000568034 M0R2C6 588 aa21.71■■□□□ 1.07
COMMD4-222ENST00000568034 BAG3O95817 575 aa21.71■■□□□ 1.07
COMMD4-222ENST00000568034 LRRFIP1Q32MZ4 808 aaKnown RBP21.71■■□□□ 1.07
COMMD4-222ENST00000568034 USP48Q86UV5 1035 aa21.71■■□□□ 1.07
COMMD4-222ENST00000568034 SEC62Q99442 399 aaKnown RBP21.71■■□□□ 1.07
COMMD4-222ENST00000568034 MBD4O95243 580 aa21.7■■□□□ 1.06
COMMD4-222ENST00000568034 PLCG2P16885 1265 aa21.7■■□□□ 1.06
COMMD4-222ENST00000568034 FMR1Q06787 632 aaKnown RBP eCLIP21.7■■□□□ 1.06
COMMD4-222ENST00000568034 CDC37L1Q7L3B6 337 aa21.7■■□□□ 1.06
COMMD4-222ENST00000568034 SULF1Q8IWU6 871 aa21.7■■□□□ 1.06
COMMD4-222ENST00000568034 TEX11Q8IYF3 940 aa21.7■■□□□ 1.06
COMMD4-222ENST00000568034 FAM227BQ96M60 508 aa21.7■■□□□ 1.06
COMMD4-222ENST00000568034 NOL10Q9BSC4 688 aaKnown RBP21.7■■□□□ 1.06
COMMD4-222ENST00000568034 ARMT1Q9H993 441 aa21.7■■□□□ 1.06
COMMD4-222ENST00000568034 TMOD2Q9NZR1 351 aa21.7■■□□□ 1.06
COMMD4-222ENST00000568034 A0A0D9SFI3 127 aa21.69■■□□□ 1.06
COMMD4-222ENST00000568034 TRAF5O00463 557 aa21.69■■□□□ 1.06
COMMD4-222ENST00000568034 RASA3Q14644 834 aa21.69■■□□□ 1.06
COMMD4-222ENST00000568034 FAM83AQ86UY5 434 aa21.69■■□□□ 1.06
COMMD4-222ENST00000568034 CDAN1Q8IWY9 1227 aa21.69■■□□□ 1.06
COMMD4-222ENST00000568034 ZFPM1Q8IX07 1006 aa21.69■■□□□ 1.06
COMMD4-222ENST00000568034 TEPSINQ96N21 525 aa21.69■■□□□ 1.06
COMMD4-222ENST00000568034 DEFB129Q9H1M3 183 aa21.69■■□□□ 1.06
COMMD4-222ENST00000568034 PASKQ96RG2 1323 aa21.69■■□□□ 1.06
COMMD4-222ENST00000568034 DDX60LQ5H9U9 1706 aaKnown RBP21.69■■□□□ 1.06
COMMD4-222ENST00000568034 NPM3O75607 178 aaKnown RBP21.68■■□□□ 1.06
COMMD4-222ENST00000568034 FSTL1Q12841 308 aa21.68■■□□□ 1.06
COMMD4-222ENST00000568034 NMIQ13287 307 aaPredicted RBP21.68■■□□□ 1.06
COMMD4-222ENST00000568034 TNFAIP1Q13829 316 aa21.68■■□□□ 1.06
COMMD4-222ENST00000568034 CERS3Q8IU89 383 aa21.68■■□□□ 1.06
COMMD4-222ENST00000568034 RPAP1Q9BWH6 1393 aaPredicted RBP21.68■■□□□ 1.06
COMMD4-222ENST00000568034 SSC5DA1L4H1 1573 aa21.67■■□□□ 1.06
COMMD4-222ENST00000568034 GPAA1O43292 621 aa21.67■■□□□ 1.06
COMMD4-222ENST00000568034 PRAMEF18Q5VWM3 479 aa21.67■■□□□ 1.06
COMMD4-222ENST00000568034 SH3BP5LQ7L8J4 393 aa21.67■■□□□ 1.06
COMMD4-222ENST00000568034 STRBPQ96SI9 672 aaKnown RBP21.67■■□□□ 1.06
COMMD4-222ENST00000568034 TMEM39BQ9GZU3 492 aa21.67■■□□□ 1.06
COMMD4-222ENST00000568034 PPP2R3BQ9Y5P8 575 aa21.67■■□□□ 1.06
COMMD4-222ENST00000568034 FLT1P17948 1338 aa21.66■■□□□ 1.06
COMMD4-222ENST00000568034 ENTPD3O75355 529 aa21.66■■□□□ 1.06
COMMD4-222ENST00000568034 TCP10Q12799 353 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms