RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 ITSN1Q15811 1721 aa13.28□□□□□ -0.28
CDH1-210ENST00000566612 GNPATO15228 680 aa13.28□□□□□ -0.28
CDH1-210ENST00000566612 TPTE2Q6XPS3 522 aa13.28□□□□□ -0.28
CDH1-210ENST00000566612 TTLL11Q8NHH1 800 aa13.28□□□□□ -0.28
CDH1-210ENST00000566612 KCNH3Q9ULD8 1083 aa13.28□□□□□ -0.28
CDH1-210ENST00000566612 PATL2C9JE40 543 aaKnown RBP13.28□□□□□ -0.28
CDH1-210ENST00000566612 KIF5BP33176 963 aa13.28□□□□□ -0.28
CDH1-210ENST00000566612 NDUFA8P51970 172 aa13.28□□□□□ -0.28
CDH1-210ENST00000566612 ZNF174Q15697 407 aa13.28□□□□□ -0.28
CDH1-210ENST00000566612 AKNAD1Q5T1N1 836 aa13.28□□□□□ -0.28
CDH1-210ENST00000566612 PYCARDQ9ULZ3 195 aa13.28□□□□□ -0.28
CDH1-210ENST00000566612 MROH5Q6ZUA9 1318 aa13.28□□□□□ -0.28
CDH1-210ENST00000566612 C1orf167Q5SNV9 1468 aa13.28□□□□□ -0.28
CDH1-210ENST00000566612 F8W031 263 aaPredicted RBP13.28□□□□□ -0.28
CDH1-210ENST00000566612 POLR2DO15514 142 aaKnown RBP13.28□□□□□ -0.28
CDH1-210ENST00000566612 KRT18P05783 430 aaKnown RBP13.28□□□□□ -0.28
CDH1-210ENST00000566612 UBA7P41226 1012 aa13.28□□□□□ -0.28
CDH1-210ENST00000566612 EIF5P55010 431 aaKnown RBP13.28□□□□□ -0.28
CDH1-210ENST00000566612 SCARF1Q14162 830 aa13.28□□□□□ -0.28
CDH1-210ENST00000566612 ZSWIM4Q9H7M6 989 aa13.28□□□□□ -0.28
CDH1-210ENST00000566612 SEC63Q9UGP8 760 aaKnown RBP13.28□□□□□ -0.28
CDH1-210ENST00000566612 DNAI1Q9UI46 699 aa13.28□□□□□ -0.28
CDH1-210ENST00000566612 KIF2AO00139 706 aaPredicted RBP13.28□□□□□ -0.28
CDH1-210ENST00000566612 ZSCAN12O43309 604 aa13.28□□□□□ -0.28
CDH1-210ENST00000566612 RESTQ13127 1097 aa13.28□□□□□ -0.28
CDH1-210ENST00000566612 ADALQ6DHV7 355 aa13.28□□□□□ -0.28
CDH1-210ENST00000566612 INCENPQ9NQS7 918 aa13.28□□□□□ -0.28
CDH1-210ENST00000566612 AATFQ9NY61 560 aaKnown RBP eCLIP13.28□□□□□ -0.28
CDH1-210ENST00000566612 PRKAB2O43741 272 aa13.27□□□□□ -0.28
CDH1-210ENST00000566612 BAG3O95817 575 aa13.27□□□□□ -0.28
CDH1-210ENST00000566612 ATG9AQ7Z3C6 839 aa13.27□□□□□ -0.28
CDH1-210ENST00000566612 CAGE1Q8TC20 777 aa13.27□□□□□ -0.28
CDH1-210ENST00000566612 NOC3LQ8WTT2 800 aaKnown RBP13.27□□□□□ -0.28
CDH1-210ENST00000566612 CLIC6Q96NY7 704 aa13.27□□□□□ -0.28
CDH1-210ENST00000566612 TANGO6Q9C0B7 1094 aa13.27□□□□□ -0.28
CDH1-210ENST00000566612 ZNHIT6Q9NWK9 470 aaKnown RBP13.27□□□□□ -0.28
CDH1-210ENST00000566612 ELP1O95163 1332 aa13.27□□□□□ -0.28
CDH1-210ENST00000566612 RIOK3O14730 519 aaKnown RBP13.27□□□□□ -0.29
CDH1-210ENST00000566612 TSPY3P0CV98 308 aa13.27□□□□□ -0.29
CDH1-210ENST00000566612 TSPY8P0CW00 308 aa13.27□□□□□ -0.29
CDH1-210ENST00000566612 STOX1Q6ZVD7 989 aa13.27□□□□□ -0.29
CDH1-210ENST00000566612 CCDC150Q8NCX0 1101 aa13.27□□□□□ -0.29
CDH1-210ENST00000566612 USP42Q9H9J4 1324 aaKnown RBP13.27□□□□□ -0.29
CDH1-210ENST00000566612 AK9Q5TCS8 1911 aa13.27□□□□□ -0.29
CDH1-210ENST00000566612 BTBD18B2RXH4 712 aa13.27□□□□□ -0.29
CDH1-210ENST00000566612 MCM7P33993 719 aa13.27□□□□□ -0.29
CDH1-210ENST00000566612 MCAMP43121 646 aa13.27□□□□□ -0.29
CDH1-210ENST00000566612 GNG11P61952 73 aa13.27□□□□□ -0.29
CDH1-210ENST00000566612 GPS2Q13227 327 aa13.27□□□□□ -0.29
CDH1-210ENST00000566612 PLIN2Q99541 437 aa13.27□□□□□ -0.29
CDH1-210ENST00000566612 RPAP1Q9BWH6 1393 aaPredicted RBP13.26□□□□□ -0.29
CDH1-210ENST00000566612 PFKFB1P16118 471 aa13.26□□□□□ -0.29
CDH1-210ENST00000566612 HEATR3Q7Z4Q2 680 aa13.26□□□□□ -0.29
CDH1-210ENST00000566612 TMEM87AQ8NBN3 555 aa13.26□□□□□ -0.29
CDH1-210ENST00000566612 ZNF287Q9HBT7 754 aa13.26□□□□□ -0.29
CDH1-210ENST00000566612 KIAA1468Q9P260 1216 aa13.26□□□□□ -0.29
CDH1-210ENST00000566612 PAXBP1Q9Y5B6 917 aa13.26□□□□□ -0.29
CDH1-210ENST00000566612 LOC102724428A0A0B4J2F2 783 aa13.26□□□□□ -0.29
CDH1-210ENST00000566612 VWA3AA6NCI4 1184 aa13.26□□□□□ -0.29
CDH1-210ENST00000566612 EPS15P42566 896 aa13.26□□□□□ -0.29
CDH1-210ENST00000566612 SIK1P57059 783 aa13.26□□□□□ -0.29
CDH1-210ENST00000566612 STAMQ92783 540 aa13.26□□□□□ -0.29
CDH1-210ENST00000566612 PGBD1Q96JS3 809 aa13.26□□□□□ -0.29
CDH1-210ENST00000566612 PIH1D3Q9NQM4 214 aaKnown RBP13.26□□□□□ -0.29
CDH1-210ENST00000566612 ATG3Q9NT62 314 aa13.26□□□□□ -0.29
CDH1-210ENST00000566612 CARMIL3Q8ND23 1372 aa13.26□□□□□ -0.29
CDH1-210ENST00000566612 A0A0G2JLW4 131 aa13.26□□□□□ -0.29
CDH1-210ENST00000566612 CRKLP46109 303 aaKnown RBP13.26□□□□□ -0.29
CDH1-210ENST00000566612 RABL6Q3YEC7 729 aaPredicted RBP13.26□□□□□ -0.29
CDH1-210ENST00000566612 TEX35Q5T0J7 233 aa13.26□□□□□ -0.29
CDH1-210ENST00000566612 RRAGBQ5VZM2 374 aa13.26□□□□□ -0.29
CDH1-210ENST00000566612 KANK3Q6NY19 840 aa13.26□□□□□ -0.29
CDH1-210ENST00000566612 NUP88Q99567 741 aaPredicted RBP13.26□□□□□ -0.29
CDH1-210ENST00000566612 VPS54Q9P1Q0 977 aa13.26□□□□□ -0.29
CDH1-210ENST00000566612 RTCBQ9Y3I0 505 aaKnown RBP13.26□□□□□ -0.29
CDH1-210ENST00000566612 N4BP3O15049 544 aa13.25□□□□□ -0.29
CDH1-210ENST00000566612 YEATS4O95619 227 aa13.25□□□□□ -0.29
CDH1-210ENST00000566612 MYL5Q02045 173 aa13.25□□□□□ -0.29
CDH1-210ENST00000566612 PNOCQ13519 176 aa13.25□□□□□ -0.29
CDH1-210ENST00000566612 SPTY2D1Q68D10 685 aaPredicted RBP13.25□□□□□ -0.29
CDH1-210ENST00000566612 C11orf57Q6ZUT1 292 aaPredicted RBP13.25□□□□□ -0.29
CDH1-210ENST00000566612 FBXO3Q9UK99 471 aa13.25□□□□□ -0.29
CDH1-210ENST00000566612 LMTK3Q96Q04 1460 aa13.25□□□□□ -0.29
CDH1-210ENST00000566612 UBAP1LF5GYI3 381 aa13.25□□□□□ -0.29
CDH1-210ENST00000566612 ADD2P35612 726 aa13.25□□□□□ -0.29
CDH1-210ENST00000566612 DEXIO95424 95 aa13.25□□□□□ -0.29
CDH1-210ENST00000566612 LDHCP07864 332 aa13.25□□□□□ -0.29
CDH1-210ENST00000566612 HIBADHP31937 336 aaKnown RBP13.25□□□□□ -0.29
CDH1-210ENST00000566612 KRT2P35908 639 aa13.25□□□□□ -0.29
CDH1-210ENST00000566612 CHRNDQ07001 517 aa13.25□□□□□ -0.29
CDH1-210ENST00000566612 FAM47AQ5JRC9 791 aa13.25□□□□□ -0.29
CDH1-210ENST00000566612 APOA5Q6Q788 366 aa13.25□□□□□ -0.29
CDH1-210ENST00000566612 RCOR1Q9UKL0 485 aa13.25□□□□□ -0.29
CDH1-210ENST00000566612 USP17L12C9JPN9 530 aa13.24□□□□□ -0.29
CDH1-210ENST00000566612 USP17L21D6R901 530 aa13.24□□□□□ -0.29
CDH1-210ENST00000566612 RILPL1Q5EBL4 403 aa13.24□□□□□ -0.29
CDH1-210ENST00000566612 CCDC70Q6NSX1 233 aa13.24□□□□□ -0.29
CDH1-210ENST00000566612 SYT10Q6XYQ8 523 aa13.24□□□□□ -0.29
CDH1-210ENST00000566612 ZBTB9Q96C00 473 aa13.24□□□□□ -0.29
CDH1-210ENST00000566612 IDEP14735 1019 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms