RNA–Protein interactions for RNA: ENST00000565296.5

CCNDBP1-206, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-206ENST00000565296 CDC42EP5Q6NZY7 148 aa16.81■□□□□ 0.28
CCNDBP1-206ENST00000565296 CNTROBQ8N137 903 aa16.81■□□□□ 0.28
CCNDBP1-206ENST00000565296 ZNF70Q9UC06 446 aaPredicted RBP16.81■□□□□ 0.28
CCNDBP1-206ENST00000565296 DOCK2Q92608 1830 aa16.8■□□□□ 0.28
CCNDBP1-206ENST00000565296 MYO5AQ9Y4I1 1855 aaKnown RBP16.8■□□□□ 0.28
CCNDBP1-206ENST00000565296 ITGBL1O95965 494 aaPredicted RBP16.8■□□□□ 0.28
CCNDBP1-206ENST00000565296 GSPT1P15170 499 aaKnown RBP16.8■□□□□ 0.28
CCNDBP1-206ENST00000565296 ADD2P35612 726 aa16.8■□□□□ 0.28
CCNDBP1-206ENST00000565296 BTDP43251 543 aa16.8■□□□□ 0.28
CCNDBP1-206ENST00000565296 CACNB3P54284 484 aa16.8■□□□□ 0.28
CCNDBP1-206ENST00000565296 SMC1BQ8NDV3 1235 aa16.8■□□□□ 0.28
CCNDBP1-206ENST00000565296 GLIS2Q9BZE0 524 aaPredicted RBP16.8■□□□□ 0.28
CCNDBP1-206ENST00000565296 PITPNM2Q9BZ72 1349 aa16.8■□□□□ 0.28
CCNDBP1-206ENST00000565296 ZNF532Q9HCE3 1301 aa16.8■□□□□ 0.28
CCNDBP1-206ENST00000565296 ADM5C9JUS6 153 aa16.8■□□□□ 0.28
CCNDBP1-206ENST00000565296 LDHCP07864 332 aa16.8■□□□□ 0.28
CCNDBP1-206ENST00000565296 RHBDL3P58872 404 aa16.8■□□□□ 0.28
CCNDBP1-206ENST00000565296 DCPSQ96C86 337 aaKnown RBP16.8■□□□□ 0.28
CCNDBP1-206ENST00000565296 MYO1BO43795 1136 aa16.79■□□□□ 0.28
CCNDBP1-206ENST00000565296 FMR1Q06787 632 aaKnown RBP eCLIP16.79■□□□□ 0.282e-6■■■■□ 24.2
CCNDBP1-206ENST00000565296 TTC22Q5TAA0 569 aa16.79■□□□□ 0.28
CCNDBP1-206ENST00000565296 TMED8Q6PL24 325 aaPredicted RBP16.79■□□□□ 0.28
CCNDBP1-206ENST00000565296 KRT26Q7Z3Y9 468 aa16.79■□□□□ 0.28
CCNDBP1-206ENST00000565296 USP48Q86UV5 1035 aa16.79■□□□□ 0.28
CCNDBP1-206ENST00000565296 EVI5LQ96CN4 794 aa16.79■□□□□ 0.28
CCNDBP1-206ENST00000565296 USP40Q9NVE5 1235 aa16.79■□□□□ 0.28
CCNDBP1-206ENST00000565296 MAST2Q6P0Q8 1798 aa16.79■□□□□ 0.28
CCNDBP1-206ENST00000565296 TRAF5O00463 557 aa16.78■□□□□ 0.28
CCNDBP1-206ENST00000565296 PPP4CP60510 307 aa16.78■□□□□ 0.28
CCNDBP1-206ENST00000565296 NFIAQ12857 509 aa16.78■□□□□ 0.28
CCNDBP1-206ENST00000565296 MIGA1Q8NAN2 632 aa16.78■□□□□ 0.28
CCNDBP1-206ENST00000565296 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.78■□□□□ 0.281e-6■■■□□ 18.5
CCNDBP1-206ENST00000565296 VEZTQ9HBM0 779 aa16.78■□□□□ 0.28
CCNDBP1-206ENST00000565296 AATFQ9NY61 560 aaKnown RBP eCLIP16.78■□□□□ 0.28
CCNDBP1-206ENST00000565296 WDHD1O75717 1129 aaPredicted RBP16.77■□□□□ 0.28
CCNDBP1-206ENST00000565296 DYNLL1P63167 89 aaKnown RBP16.77■□□□□ 0.28
CCNDBP1-206ENST00000565296 FSTL1Q12841 308 aa16.77■□□□□ 0.28
CCNDBP1-206ENST00000565296 UBE3CQ15386 1083 aa16.77■□□□□ 0.28
CCNDBP1-206ENST00000565296 CDC37L1Q7L3B6 337 aa16.77■□□□□ 0.28
CCNDBP1-206ENST00000565296 RIOK1Q9BRS2 568 aaKnown RBP16.77■□□□□ 0.28
CCNDBP1-206ENST00000565296 FSD1Q9BTV5 496 aa16.77■□□□□ 0.28
CCNDBP1-206ENST00000565296 RFX7Q2KHR2 1363 aa16.77■□□□□ 0.28
CCNDBP1-206ENST00000565296 TRIM6-TRIM34B2RNG4 842 aa16.77■□□□□ 0.27
CCNDBP1-206ENST00000565296 APOBEC3FQ8IUX4 373 aaKnown RBP16.77■□□□□ 0.27
CCNDBP1-206ENST00000565296 SULF1Q8IWU6 871 aa16.77■□□□□ 0.27
CCNDBP1-206ENST00000565296 SH3RF3Q8TEJ3 882 aaPredicted RBP16.77■□□□□ 0.27
CCNDBP1-206ENST00000565296 DEFB129Q9H1M3 183 aa16.77■□□□□ 0.27
CCNDBP1-206ENST00000565296 PASKQ96RG2 1323 aa16.77■□□□□ 0.27
CCNDBP1-206ENST00000565296 CNTNAP1P78357 1384 aa16.77■□□□□ 0.27
CCNDBP1-206ENST00000565296 MYH2Q9UKX2 1941 aa16.76■□□□□ 0.27
CCNDBP1-206ENST00000565296 TCP10L2B9ZVM9 353 aa16.76■□□□□ 0.27
CCNDBP1-206ENST00000565296 RNF113AO15541 343 aaKnown RBP16.76■□□□□ 0.27
CCNDBP1-206ENST00000565296 FKBP1CQ5VVH2 108 aa16.76■□□□□ 0.27
CCNDBP1-206ENST00000565296 PRAMEF18Q5VWM3 479 aa16.76■□□□□ 0.27
CCNDBP1-206ENST00000565296 ZSCAN25Q6NSZ9 544 aa16.76■□□□□ 0.27
CCNDBP1-206ENST00000565296 FAM198AQ9UFP1 575 aa16.76■□□□□ 0.27
CCNDBP1-206ENST00000565296 BAG3O95817 575 aa16.75■□□□□ 0.27
CCNDBP1-206ENST00000565296 SDSP20132 328 aa16.75■□□□□ 0.27
CCNDBP1-206ENST00000565296 RGS3P49796 1198 aa16.75■□□□□ 0.27
CCNDBP1-206ENST00000565296 RASA3Q14644 834 aa16.75■□□□□ 0.27
CCNDBP1-206ENST00000565296 CDAN1Q8IWY9 1227 aa16.75■□□□□ 0.27
CCNDBP1-206ENST00000565296 OSBP2Q969R2 916 aa16.75■□□□□ 0.27
CCNDBP1-206ENST00000565296 RILPL2Q969X0 211 aa16.75■□□□□ 0.27
CCNDBP1-206ENST00000565296 IDI2Q9BXS1 227 aa16.75■□□□□ 0.27
CCNDBP1-206ENST00000565296 PUS7LQ9H0K6 701 aaKnown RBP16.75■□□□□ 0.27
CCNDBP1-206ENST00000565296 DDX4Q9NQI0 724 aaKnown RBP16.75■□□□□ 0.27
CCNDBP1-206ENST00000565296 ZFYP08048 801 aaPredicted RBP16.75■□□□□ 0.27
CCNDBP1-206ENST00000565296 ZFPM1Q8IX07 1006 aa16.75■□□□□ 0.27
CCNDBP1-206ENST00000565296 LCORLQ8N3X6 602 aa16.74■□□□□ 0.27
CCNDBP1-206ENST00000565296 TEPSINQ96N21 525 aa16.74■□□□□ 0.27
CCNDBP1-206ENST00000565296 TMEM39BQ9GZU3 492 aa16.74■□□□□ 0.27
CCNDBP1-206ENST00000565296 MAGEB6P1A0A0J9YX57 407 aa16.73■□□□□ 0.27
CCNDBP1-206ENST00000565296 TCP10Q12799 353 aa16.73■□□□□ 0.27
CCNDBP1-206ENST00000565296 FAM83AQ86UY5 434 aa16.73■□□□□ 0.27
CCNDBP1-206ENST00000565296 TEX11Q8IYF3 940 aa16.73■□□□□ 0.27
CCNDBP1-206ENST00000565296 APPBP2Q92624 585 aa16.73■□□□□ 0.27
CCNDBP1-206ENST00000565296 CDCA5Q96FF9 252 aa16.73■□□□□ 0.27
CCNDBP1-206ENST00000565296 DDRGK1Q96HY6 314 aa16.73■□□□□ 0.27
CCNDBP1-206ENST00000565296 SEC62Q99442 399 aaKnown RBP16.73■□□□□ 0.27
CCNDBP1-206ENST00000565296 NOL10Q9BSC4 688 aaKnown RBP16.73■□□□□ 0.27
CCNDBP1-206ENST00000565296 TMOD2Q9NZR1 351 aa16.73■□□□□ 0.27
CCNDBP1-206ENST00000565296 MBD4O95243 580 aa16.73■□□□□ 0.27
CCNDBP1-206ENST00000565296 TNFAIP1Q13829 316 aa16.73■□□□□ 0.27
CCNDBP1-206ENST00000565296 ZMYM1Q5SVZ6 1142 aa16.73■□□□□ 0.27
CCNDBP1-206ENST00000565296 ARMT1Q9H993 441 aa16.73■□□□□ 0.27
CCNDBP1-206ENST00000565296 ECM29Q5VYK3 1845 aa16.72■□□□□ 0.27
CCNDBP1-206ENST00000565296 M0R2C6 588 aa16.72■□□□□ 0.27
CCNDBP1-206ENST00000565296 PLCG2P16885 1265 aa16.72■□□□□ 0.27
CCNDBP1-206ENST00000565296 C1QTNF8P60827 252 aa16.72■□□□□ 0.27
CCNDBP1-206ENST00000565296 CST9Q5W186 159 aa16.72■□□□□ 0.27
CCNDBP1-206ENST00000565296 TICAM2Q86XR7 235 aa16.72■□□□□ 0.27
CCNDBP1-206ENST00000565296 TGFBRAP1Q8WUH2 860 aa16.72■□□□□ 0.27
CCNDBP1-206ENST00000565296 FAM227BQ96M60 508 aa16.72■□□□□ 0.27
CCNDBP1-206ENST00000565296 NPM3O75607 178 aaKnown RBP16.71■□□□□ 0.27
CCNDBP1-206ENST00000565296 PICALMQ13492 652 aa16.71■□□□□ 0.27
CCNDBP1-206ENST00000565296 LRRFIP1Q32MZ4 808 aaKnown RBP16.71■□□□□ 0.27
CCNDBP1-206ENST00000565296 NBPF12Q5TAG4 269 aaPredicted RBP16.71■□□□□ 0.27
CCNDBP1-206ENST00000565296 SH3BP5LQ7L8J4 393 aa16.71■□□□□ 0.27
CCNDBP1-206ENST00000565296 CERS3Q8IU89 383 aa16.71■□□□□ 0.27
CCNDBP1-206ENST00000565296 FAM151AQ8WW52 585 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms