RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 COL19A1Q14993 1142 aa8.78□□□□□ -1
UBR1-205ENST00000564540 HP1BP3Q5SSJ5 553 aaPredicted RBP8.78□□□□□ -1
UBR1-205ENST00000564540 LCE1DQ5T752 114 aa8.78□□□□□ -1
UBR1-205ENST00000564540 CDPF1Q6NVV7 123 aa8.78□□□□□ -1
UBR1-205ENST00000564540 DUSP9Q99956 384 aaKnown RBP8.78□□□□□ -1
UBR1-205ENST00000564540 FAM83CQ9BQN1 747 aa8.78□□□□□ -1
UBR1-205ENST00000564540 WDR18Q9BV38 432 aa8.78□□□□□ -1
UBR1-205ENST00000564540 RNF112Q9ULX5 631 aa8.78□□□□□ -1
UBR1-205ENST00000564540 HIF3AQ9Y2N7 669 aa8.78□□□□□ -1
UBR1-205ENST00000564540 ACTL7BQ9Y614 415 aa8.78□□□□□ -1
UBR1-205ENST00000564540 AOC2O75106 756 aa8.77□□□□□ -1.01
UBR1-205ENST00000564540 IGLV1-40P01703 118 aa8.77□□□□□ -1.01
UBR1-205ENST00000564540 RXRBP28702 533 aa8.77□□□□□ -1.01
UBR1-205ENST00000564540 USP11P51784 963 aa8.77□□□□□ -1.01
UBR1-205ENST00000564540 CCDC27Q2M243 656 aa8.77□□□□□ -1.01
UBR1-205ENST00000564540 PDZD3Q86UT5 571 aa8.77□□□□□ -1.01
UBR1-205ENST00000564540 SULF2Q8IWU5 870 aa8.77□□□□□ -1.01
UBR1-205ENST00000564540 FBLIM1Q8WUP2 373 aa8.77□□□□□ -1.01
UBR1-205ENST00000564540 NECAB3Q96P71 396 aaPredicted RBP8.77□□□□□ -1.01
UBR1-205ENST00000564540 FMNL2Q96PY5 1086 aa8.77□□□□□ -1.01
UBR1-205ENST00000564540 AP4E1Q9UPM8 1137 aa8.77□□□□□ -1.01
UBR1-205ENST00000564540 ENC1O14682 589 aa8.76□□□□□ -1.01
UBR1-205ENST00000564540 PAX4O43316 350 aa8.76□□□□□ -1.01
UBR1-205ENST00000564540 ZNF862O60290 1169 aa8.76□□□□□ -1.01
UBR1-205ENST00000564540 PAGE1O75459 146 aa8.76□□□□□ -1.01
UBR1-205ENST00000564540 GNA15P30679 374 aa8.76□□□□□ -1.01
UBR1-205ENST00000564540 TXKP42681 527 aa8.76□□□□□ -1.01
UBR1-205ENST00000564540 NFIAQ12857 509 aa8.76□□□□□ -1.01
UBR1-205ENST00000564540 DYMQ7RTS9 669 aa8.76□□□□□ -1.01
UBR1-205ENST00000564540 FAM8A1Q9UBU6 413 aa8.76□□□□□ -1.01
UBR1-205ENST00000564540 RNF43Q68DV7 783 aa8.75□□□□□ -1.01
UBR1-205ENST00000564540 KCNB2Q92953 911 aa8.75□□□□□ -1.01
UBR1-205ENST00000564540 FAM105AQ9NUU6 356 aa8.75□□□□□ -1.01
UBR1-205ENST00000564540 PPP1R9AQ9ULJ8 1098 aa8.75□□□□□ -1.01
UBR1-205ENST00000564540 PPM1HQ9ULR3 514 aa8.75□□□□□ -1.01
UBR1-205ENST00000564540 RAB6AP20340 208 aa8.74□□□□□ -1.01
UBR1-205ENST00000564540 NME2P22392 152 aa8.74□□□□□ -1.01
UBR1-205ENST00000564540 ARNTP27540 789 aa8.74□□□□□ -1.01
UBR1-205ENST00000564540 MPRIPQ6WCQ1 1025 aa8.74□□□□□ -1.01
UBR1-205ENST00000564540 FAM95CA0A1B0GW59 222 aa8.73□□□□□ -1.01
UBR1-205ENST00000564540 GSC2O15499 205 aa8.73□□□□□ -1.01
UBR1-205ENST00000564540 CELA3AP09093 270 aa8.73□□□□□ -1.01
UBR1-205ENST00000564540 YBX3P16989 372 aaKnown RBP eCLIP8.73□□□□□ -1.01
UBR1-205ENST00000564540 EIF4BP23588 611 aaKnown RBP8.73□□□□□ -1.01
UBR1-205ENST00000564540 TAGLNQ01995 201 aaKnown RBP8.73□□□□□ -1.01
UBR1-205ENST00000564540 NFKBIBQ15653 356 aa8.73□□□□□ -1.01
UBR1-205ENST00000564540 MAP1SQ66K74 1059 aaPredicted RBP8.73□□□□□ -1.01
UBR1-205ENST00000564540 FBXO33Q7Z6M2 555 aa8.73□□□□□ -1.01
UBR1-205ENST00000564540 MFSD14AQ96MC6 490 aa8.73□□□□□ -1.01
UBR1-205ENST00000564540 FRMD6Q96NE9 622 aa8.73□□□□□ -1.01
UBR1-205ENST00000564540 DBNDD2Q9BQY9 259 aa8.73□□□□□ -1.01
UBR1-205ENST00000564540 CEP44Q9C0F1 390 aa8.73□□□□□ -1.01
UBR1-205ENST00000564540 CBX8Q9HC52 389 aa8.73□□□□□ -1.01
UBR1-205ENST00000564540 PARP2Q9UGN5 583 aa8.73□□□□□ -1.01
UBR1-205ENST00000564540 TMPRSS2O15393 492 aa8.72□□□□□ -1.01
UBR1-205ENST00000564540 COBLO75128 1261 aa8.72□□□□□ -1.01
UBR1-205ENST00000564540 BMP6P22004 513 aa8.72□□□□□ -1.01
UBR1-205ENST00000564540 ASPAP45381 313 aa8.72□□□□□ -1.01
UBR1-205ENST00000564540 ZNF252P-AS1Q0IIN9 211 aa8.72□□□□□ -1.01
UBR1-205ENST00000564540 RASIP1Q5U651 963 aa8.72□□□□□ -1.01
UBR1-205ENST00000564540 SLC51AQ86UW1 340 aa8.72□□□□□ -1.01
UBR1-205ENST00000564540 ZDHHC13Q8IUH4 622 aa8.72□□□□□ -1.01
UBR1-205ENST00000564540 GRIN3AQ8TCU5 1115 aa8.72□□□□□ -1.01
UBR1-205ENST00000564540 FAM161BQ96MY7 647 aa8.72□□□□□ -1.01
UBR1-205ENST00000564540 KRT82Q9NSB4 513 aa8.72□□□□□ -1.01
UBR1-205ENST00000564540 AK5Q9Y6K8 562 aa8.72□□□□□ -1.01
UBR1-205ENST00000564540 NFICP08651 508 aa8.71□□□□□ -1.02
UBR1-205ENST00000564540 KIF4BQ2VIQ3 1234 aa8.71□□□□□ -1.02
UBR1-205ENST00000564540 SHISA5Q8N114 240 aa8.71□□□□□ -1.02
UBR1-205ENST00000564540 EZH1Q92800 747 aaPredicted RBP8.71□□□□□ -1.02
UBR1-205ENST00000564540 SEMA6CQ9H3T2 930 aa8.71□□□□□ -1.02
UBR1-205ENST00000564540 GSX1Q9H4S2 264 aaPredicted RBP8.71□□□□□ -1.02
UBR1-205ENST00000564540 TTF2Q9UNY4 1162 aaKnown RBP8.71□□□□□ -1.02
UBR1-205ENST00000564540 PCDHGC5Q9Y5F6 944 aa8.71□□□□□ -1.02
UBR1-205ENST00000564540 TGFB1P01137 390 aa8.7□□□□□ -1.02
UBR1-205ENST00000564540 SLFN14P0C7P3 912 aa8.7□□□□□ -1.02
UBR1-205ENST00000564540 FGD1P98174 961 aa8.7□□□□□ -1.02
UBR1-205ENST00000564540 PAOXQ6QHF9 649 aa8.7□□□□□ -1.02
UBR1-205ENST00000564540 FBXL6Q8N531 539 aa8.7□□□□□ -1.02
UBR1-205ENST00000564540 SHKBP1Q8TBC3 707 aa8.7□□□□□ -1.02
UBR1-205ENST00000564540 GPBAR1Q8TDU6 330 aa8.7□□□□□ -1.02
UBR1-205ENST00000564540 ANKRD24Q8TF21 1146 aa8.7□□□□□ -1.02
UBR1-205ENST00000564540 EMILIN2Q9BXX0 1053 aa8.7□□□□□ -1.02
UBR1-205ENST00000564540 ACSS3Q9H6R3 686 aa8.7□□□□□ -1.02
UBR1-205ENST00000564540 CRIM1Q9NZV1 1036 aa8.7□□□□□ -1.02
UBR1-205ENST00000564540 SYNGAP1Q96PV0 1343 aa8.7□□□□□ -1.02
UBR1-205ENST00000564540 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.69□□□□□ -1.02
UBR1-205ENST00000564540 ID3Q02535 119 aa8.69□□□□□ -1.02
UBR1-205ENST00000564540 FANCD2OSQ96PS1 177 aa8.69□□□□□ -1.02
UBR1-205ENST00000564540 YIPF2Q9BWQ6 316 aa8.69□□□□□ -1.02
UBR1-205ENST00000564540 LGR6Q9HBX8 967 aa8.69□□□□□ -1.02
UBR1-205ENST00000564540 ARID1BQ8NFD5 2236 aaPredicted RBP8.68□□□□□ -1.02
UBR1-205ENST00000564540 WDR64B1ANS9 1081 aa8.68□□□□□ -1.02
UBR1-205ENST00000564540 DYNC1LI2O43237 492 aaPredicted RBP8.68□□□□□ -1.02
UBR1-205ENST00000564540 ADMP35318 185 aa8.68□□□□□ -1.02
UBR1-205ENST00000564540 DAB2P98082 770 aa8.68□□□□□ -1.02
UBR1-205ENST00000564540 PSMD2Q13200 908 aa8.68□□□□□ -1.02
UBR1-205ENST00000564540 PCNX4Q63HM2 1172 aa8.68□□□□□ -1.02
UBR1-205ENST00000564540 HOMEZQ8IX15 550 aa8.68□□□□□ -1.02
UBR1-205ENST00000564540 DISC1Q9NRI5 854 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms