RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 SLC4A4Q9Y6R1 1079 aa15.31■□□□□ 0.04
CLK3-214ENST00000564096 ZC3H4Q9UPT8 1303 aaKnown RBP15.31■□□□□ 0.04
CLK3-214ENST00000564096 TIAM2Q8IVF5 1701 aa15.31■□□□□ 0.04
CLK3-214ENST00000564096 ZNF646O15015 1829 aaPredicted RBP15.31■□□□□ 0.04
CLK3-214ENST00000564096 GPR75-ASB3A0A0A6YYF3 556 aa15.3■□□□□ 0.04
CLK3-214ENST00000564096 HSPA4P34932 840 aa15.3■□□□□ 0.04
CLK3-214ENST00000564096 CRKP46108 304 aa15.3■□□□□ 0.04
CLK3-214ENST00000564096 TDO2P48775 406 aa15.3■□□□□ 0.04
CLK3-214ENST00000564096 ANAPC15P60006 121 aa15.3■□□□□ 0.04
CLK3-214ENST00000564096 PTH1RQ03431 593 aa15.3■□□□□ 0.04
CLK3-214ENST00000564096 GRIK5Q16478 980 aa15.3■□□□□ 0.04
CLK3-214ENST00000564096 MRIQ9BWK5 157 aa15.3■□□□□ 0.04
CLK3-214ENST00000564096 NAPBQ9H115 298 aa15.3■□□□□ 0.04
CLK3-214ENST00000564096 CHD4Q14839 1912 aa15.29■□□□□ 0.04
CLK3-214ENST00000564096 MYO5AQ9Y4I1 1855 aaKnown RBP15.29■□□□□ 0.04
CLK3-214ENST00000564096 DCAF8L1A6NGE4 600 aa15.29■□□□□ 0.04
CLK3-214ENST00000564096 USP17L8P0C7I0 530 aa15.29■□□□□ 0.04
CLK3-214ENST00000564096 SCNN1DP51172 638 aa15.29■□□□□ 0.04
CLK3-214ENST00000564096 RBM5P52756 815 aaKnown RBP eCLIP15.29■□□□□ 0.04
CLK3-214ENST00000564096 PPP4CP60510 307 aa15.29■□□□□ 0.04
CLK3-214ENST00000564096 IMMTQ16891 758 aaKnown RBP15.29■□□□□ 0.04
CLK3-214ENST00000564096 GIMAP6Q6P9H5 292 aa15.29■□□□□ 0.04
CLK3-214ENST00000564096 AMOTL1Q8IY63 956 aa15.29■□□□□ 0.04
CLK3-214ENST00000564096 ZDHHC15Q96MV8 337 aa15.29■□□□□ 0.04
CLK3-214ENST00000564096 PATL2C9JE40 543 aaKnown RBP15.28■□□□□ 0.04
CLK3-214ENST00000564096 ANP32AP39687 249 aaKnown RBP15.28■□□□□ 0.04
CLK3-214ENST00000564096 USP5P45974 858 aa15.28■□□□□ 0.04
CLK3-214ENST00000564096 DYNLL1P63167 89 aaKnown RBP15.28■□□□□ 0.04
CLK3-214ENST00000564096 KRT32Q14532 448 aa15.28■□□□□ 0.04
CLK3-214ENST00000564096 VPS53Q5VIR6 699 aa15.28■□□□□ 0.04
CLK3-214ENST00000564096 ATP8A2Q9NTI2 1148 aa15.28■□□□□ 0.04
CLK3-214ENST00000564096 TMOD2Q9NZR1 351 aa15.28■□□□□ 0.04
CLK3-214ENST00000564096 ZNF541Q9H0D2 1346 aa15.27■□□□□ 0.04
CLK3-214ENST00000564096 PRELPP51888 382 aa15.27■□□□□ 0.04
CLK3-214ENST00000564096 ALX1Q15699 326 aa15.27■□□□□ 0.04
CLK3-214ENST00000564096 C9orf131Q5VYM1 1079 aa15.27■□□□□ 0.04
CLK3-214ENST00000564096 CREB3L3Q68CJ9 461 aa15.27■□□□□ 0.04
CLK3-214ENST00000564096 TEX11Q8IYF3 940 aa15.27■□□□□ 0.04
CLK3-214ENST00000564096 GPC2Q8N158 579 aa15.27■□□□□ 0.04
CLK3-214ENST00000564096 IL27Q8NEV9 243 aa15.27■□□□□ 0.04
CLK3-214ENST00000564096 GMLQ99445 158 aa15.27■□□□□ 0.04
CLK3-214ENST00000564096 ARPP21Q9UBL0 812 aaPredicted RBP15.27■□□□□ 0.04
CLK3-214ENST00000564096 GJA3Q9Y6H8 435 aa15.27■□□□□ 0.04
CLK3-214ENST00000564096 MYO1BO43795 1136 aa15.26■□□□□ 0.03
CLK3-214ENST00000564096 NECTIN1Q15223 517 aa15.26■□□□□ 0.03
CLK3-214ENST00000564096 CFAP100Q494V2 611 aa15.26■□□□□ 0.03
CLK3-214ENST00000564096 SH3RF3Q8TEJ3 882 aaPredicted RBP15.26■□□□□ 0.03
CLK3-214ENST00000564096 DPF2Q92785 391 aa15.26■□□□□ 0.03
CLK3-214ENST00000564096 ZBTB12Q9Y330 459 aaPredicted RBP15.26■□□□□ 0.03
CLK3-214ENST00000564096 MYH2Q9UKX2 1941 aa15.25■□□□□ 0.03
CLK3-214ENST00000564096 DICER1Q9UPY3 1922 aaKnown RBP15.25■□□□□ 0.03
CLK3-214ENST00000564096 GSG1L2A8MUP6 293 aa15.25■□□□□ 0.03
CLK3-214ENST00000564096 ZNF213O14771 459 aa15.25■□□□□ 0.03
CLK3-214ENST00000564096 SLC27A2O14975 620 aa15.25■□□□□ 0.03
CLK3-214ENST00000564096 PSMA5P28066 241 aa15.25■□□□□ 0.03
CLK3-214ENST00000564096 GMPSP49915 693 aaPredicted RBP15.25■□□□□ 0.03
CLK3-214ENST00000564096 RABEP1Q15276 862 aa15.25■□□□□ 0.03
CLK3-214ENST00000564096 DLGAP5Q15398 846 aa15.25■□□□□ 0.03
CLK3-214ENST00000564096 IFNL3Q8IZI9 196 aa15.25■□□□□ 0.03
CLK3-214ENST00000564096 SDR42E1Q8WUS8 393 aa15.25■□□□□ 0.03
CLK3-214ENST00000564096 EPB41L4AQ9HCS5 686 aaPredicted RBP15.25■□□□□ 0.03
CLK3-214ENST00000564096 FOXP2O15409 715 aa15.24■□□□□ 0.03
CLK3-214ENST00000564096 PRKAB2O43741 272 aa15.24■□□□□ 0.03
CLK3-214ENST00000564096 FGAP02671 866 aa15.24■□□□□ 0.03
CLK3-214ENST00000564096 SLC3A2P08195 630 aaKnown RBP15.24■□□□□ 0.03
CLK3-214ENST00000564096 LMOD1P29536 600 aaPredicted RBP15.24■□□□□ 0.03
CLK3-214ENST00000564096 MICALL2Q8IY33 904 aa15.24■□□□□ 0.03
CLK3-214ENST00000564096 MTMR14Q8NCE2 650 aa15.24■□□□□ 0.03
CLK3-214ENST00000564096 KCNB2Q92953 911 aa15.24■□□□□ 0.03
CLK3-214ENST00000564096 DCP1AQ9NPI6 582 aaPredicted RBP15.24■□□□□ 0.03
CLK3-214ENST00000564096 USP40Q9NVE5 1235 aa15.24■□□□□ 0.03
CLK3-214ENST00000564096 FLT1P17948 1338 aa15.23■□□□□ 0.03
CLK3-214ENST00000564096 NAV1Q8NEY1 1877 aa15.23■□□□□ 0.03
CLK3-214ENST00000564096 LAMA4Q16363 1823 aa15.23■□□□□ 0.03
CLK3-214ENST00000564096 SPDYE2BA6NHP3 402 aa15.23■□□□□ 0.03
CLK3-214ENST00000564096 SPDYE6P0CI01 402 aa15.23■□□□□ 0.03
CLK3-214ENST00000564096 RHBDL3P58872 404 aa15.23■□□□□ 0.03
CLK3-214ENST00000564096 ZNF280AP59817 542 aaPredicted RBP15.23■□□□□ 0.03
CLK3-214ENST00000564096 APOBEC3HQ6NTF7 200 aaKnown RBP15.23■□□□□ 0.03
CLK3-214ENST00000564096 DPY19L2Q6NUT2 758 aa15.23■□□□□ 0.03
CLK3-214ENST00000564096 TGFBRAP1Q8WUH2 860 aa15.23■□□□□ 0.03
CLK3-214ENST00000564096 IL17RAQ96F46 866 aa15.23■□□□□ 0.03
CLK3-214ENST00000564096 RNF41Q9H4P4 317 aaPredicted RBP15.23■□□□□ 0.03
CLK3-214ENST00000564096 MYOZ2Q9NPC6 264 aa15.23■□□□□ 0.03
CLK3-214ENST00000564096 PALD1Q9ULE6 856 aa15.23■□□□□ 0.03
CLK3-214ENST00000564096 RBM19Q9Y4C8 960 aaKnown RBP15.23■□□□□ 0.03
CLK3-214ENST00000564096 SNX14Q9Y5W7 946 aa15.23■□□□□ 0.03
CLK3-214ENST00000564096 ADAMTSL1Q8N6G6 1762 aa15.22■□□□□ 0.03
CLK3-214ENST00000564096 H7C1D1 291 aa15.22■□□□□ 0.03
CLK3-214ENST00000564096 ST18O60284 1047 aa15.22■□□□□ 0.03
CLK3-214ENST00000564096 CYP21A2P08686 494 aa15.22■□□□□ 0.03
CLK3-214ENST00000564096 HMGB1P09429 215 aaKnown RBP15.22■□□□□ 0.03
CLK3-214ENST00000564096 PCP11498 1178 aaKnown RBP15.22■□□□□ 0.03
CLK3-214ENST00000564096 YY1P25490 414 aa15.22■□□□□ 0.03
CLK3-214ENST00000564096 PPARAQ07869 468 aa15.22■□□□□ 0.03
CLK3-214ENST00000564096 TRDNQ13061 729 aa15.22■□□□□ 0.03
CLK3-214ENST00000564096 TSGA10IPQ3SY00 556 aa15.22■□□□□ 0.03
CLK3-214ENST00000564096 CDC42EP5Q6NZY7 148 aa15.22■□□□□ 0.03
CLK3-214ENST00000564096 RALYLQ86SE5 291 aaKnown RBP15.22■□□□□ 0.03
CLK3-214ENST00000564096 MCM9Q9NXL9 1143 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms