RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 SGO2Q562F6 1265 aa10.31□□□□□ -0.76
SMG1-204ENST00000561940 TMC4Q7Z404 712 aa10.31□□□□□ -0.76
SMG1-204ENST00000561940 MYRFLQ96LU7 910 aa10.31□□□□□ -0.76
SMG1-204ENST00000561940 FRMD6Q96NE9 622 aa10.31□□□□□ -0.76
SMG1-204ENST00000561940 NECAB3Q96P71 396 aaPredicted RBP10.31□□□□□ -0.76
SMG1-204ENST00000561940 BACH2Q9BYV9 841 aa10.31□□□□□ -0.76
SMG1-204ENST00000561940 SUGCTQ9HAC7 445 aa10.31□□□□□ -0.76
SMG1-204ENST00000561940 CBX8Q9HC52 389 aa10.31□□□□□ -0.76
SMG1-204ENST00000561940 STOML1Q9UBI4 398 aa10.31□□□□□ -0.76
SMG1-204ENST00000561940 TTF2Q9UNY4 1162 aaKnown RBP10.31□□□□□ -0.76
SMG1-204ENST00000561940 RAXQ9Y2V3 346 aa10.31□□□□□ -0.76
SMG1-204ENST00000561940 TIAF1O95411 115 aa10.3□□□□□ -0.76
SMG1-204ENST00000561940 TCF3P15923 654 aa10.3□□□□□ -0.76
SMG1-204ENST00000561940 RXRBP28702 533 aa10.3□□□□□ -0.76
SMG1-204ENST00000561940 PSMD2Q13200 908 aa10.3□□□□□ -0.76
SMG1-204ENST00000561940 HMX2A2RU54 273 aa10.29□□□□□ -0.76
SMG1-204ENST00000561940 ENC1O14682 589 aa10.29□□□□□ -0.76
SMG1-204ENST00000561940 AOC2O75106 756 aa10.29□□□□□ -0.76
SMG1-204ENST00000561940 ARNTP27540 789 aa10.29□□□□□ -0.76
SMG1-204ENST00000561940 USP11P51784 963 aa10.29□□□□□ -0.76
SMG1-204ENST00000561940 FGD1P98174 961 aa10.29□□□□□ -0.76
SMG1-204ENST00000561940 MPRIPQ6WCQ1 1025 aa10.29□□□□□ -0.76
SMG1-204ENST00000561940 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.29□□□□□ -0.76
SMG1-204ENST00000561940 DYMQ7RTS9 669 aa10.29□□□□□ -0.76
SMG1-204ENST00000561940 FAM20CQ8IXL6 584 aa10.29□□□□□ -0.76
SMG1-204ENST00000561940 AP4E1Q9UPM8 1137 aa10.29□□□□□ -0.76
SMG1-204ENST00000561940 CELA3AP09093 270 aa10.28□□□□□ -0.76
SMG1-204ENST00000561940 ADH5P11766 374 aa10.28□□□□□ -0.76
SMG1-204ENST00000561940 UVSSAQ2YD98 709 aa10.28□□□□□ -0.76
SMG1-204ENST00000561940 MAP1SQ66K74 1059 aaPredicted RBP10.28□□□□□ -0.76
SMG1-204ENST00000561940 TRIM42Q8IWZ5 723 aa10.28□□□□□ -0.76
SMG1-204ENST00000561940 C2CD4AQ8NCU7 369 aaPredicted RBP10.28□□□□□ -0.76
SMG1-204ENST00000561940 GRIN3AQ8TCU5 1115 aa10.28□□□□□ -0.76
SMG1-204ENST00000561940 FBLIM1Q8WUP2 373 aa10.28□□□□□ -0.76
SMG1-204ENST00000561940 WDR18Q9BV38 432 aa10.28□□□□□ -0.76
SMG1-204ENST00000561940 CEP44Q9C0F1 390 aa10.28□□□□□ -0.76
SMG1-204ENST00000561940 MRS2Q9HD23 443 aa10.28□□□□□ -0.76
SMG1-204ENST00000561940 VTI1BQ9UEU0 232 aa10.28□□□□□ -0.76
SMG1-204ENST00000561940 ZNF862O60290 1169 aa10.27□□□□□ -0.77
SMG1-204ENST00000561940 SORBS3O60504 671 aa10.27□□□□□ -0.77
SMG1-204ENST00000561940 NME2P22392 152 aa10.27□□□□□ -0.77
SMG1-204ENST00000561940 HP1BP3Q5SSJ5 553 aaPredicted RBP10.27□□□□□ -0.77
SMG1-204ENST00000561940 CDPF1Q6NVV7 123 aa10.27□□□□□ -0.77
SMG1-204ENST00000561940 BEND4Q6ZU67 534 aa10.27□□□□□ -0.77
SMG1-204ENST00000561940 PDZD3Q86UT5 571 aa10.27□□□□□ -0.77
SMG1-204ENST00000561940 C7orf69Q9H7B7 122 aa10.27□□□□□ -0.77
SMG1-204ENST00000561940 PPP1R9AQ9ULJ8 1098 aa10.27□□□□□ -0.77
SMG1-204ENST00000561940 PPM1HQ9ULR3 514 aa10.27□□□□□ -0.77
SMG1-204ENST00000561940 FSTP19883 344 aa10.26□□□□□ -0.77
SMG1-204ENST00000561940 BMP6P22004 513 aa10.26□□□□□ -0.77
SMG1-204ENST00000561940 MAP4P27816 1152 aaKnown RBP10.26□□□□□ -0.77
SMG1-204ENST00000561940 MEI1Q5TIA1 1274 aa10.26□□□□□ -0.77
SMG1-204ENST00000561940 ACTL7BQ9Y614 415 aa10.26□□□□□ -0.77
SMG1-204ENST00000561940 NFKBIBQ15653 356 aa10.25□□□□□ -0.77
SMG1-204ENST00000561940 RASIP1Q5U651 963 aa10.25□□□□□ -0.77
SMG1-204ENST00000561940 CTSHP09668 335 aa10.24□□□□□ -0.77
SMG1-204ENST00000561940 RAB6AP20340 208 aa10.24□□□□□ -0.77
SMG1-204ENST00000561940 ASPAP45381 313 aa10.24□□□□□ -0.77
SMG1-204ENST00000561940 CLEC10AQ8IUN9 316 aa10.24□□□□□ -0.77
SMG1-204ENST00000561940 EMILIN2Q9BXX0 1053 aa10.24□□□□□ -0.77
SMG1-204ENST00000561940 BCL11AQ9H165 835 aa10.24□□□□□ -0.77
SMG1-204ENST00000561940 LGR6Q9HBX8 967 aa10.24□□□□□ -0.77
SMG1-204ENST00000561940 FAM105AQ9NUU6 356 aa10.24□□□□□ -0.77
SMG1-204ENST00000561940 SLFN14P0C7P3 912 aa10.23□□□□□ -0.77
SMG1-204ENST00000561940 CCDC85BQ15834 202 aaPredicted RBP10.23□□□□□ -0.77
SMG1-204ENST00000561940 MAP3K11Q16584 847 aa10.23□□□□□ -0.77
SMG1-204ENST00000561940 GPBAR1Q8TDU6 330 aa10.23□□□□□ -0.77
SMG1-204ENST00000561940 ACSBG1Q96GR2 724 aa10.23□□□□□ -0.77
SMG1-204ENST00000561940 FAM83CQ9BQN1 747 aa10.23□□□□□ -0.77
SMG1-204ENST00000561940 PCNX4Q63HM2 1172 aa10.22□□□□□ -0.77
SMG1-204ENST00000561940 TMEM87AQ8NBN3 555 aa10.22□□□□□ -0.77
SMG1-204ENST00000561940 HIF3AQ9Y2N7 669 aa10.22□□□□□ -0.77
SMG1-204ENST00000561940 SAMM50Q9Y512 469 aa10.22□□□□□ -0.77
SMG1-204ENST00000561940 FAM95CA0A1B0GW59 222 aa10.21□□□□□ -0.77
SMG1-204ENST00000561940 TMPRSS2O15393 492 aa10.21□□□□□ -0.77
SMG1-204ENST00000561940 NFICP08651 508 aa10.21□□□□□ -0.77
SMG1-204ENST00000561940 HDLBPQ00341 1268 aaKnown RBP10.21□□□□□ -0.77
SMG1-204ENST00000561940 ZNF252P-AS1Q0IIN9 211 aa10.21□□□□□ -0.77
SMG1-204ENST00000561940 C9orf131Q5VYM1 1079 aa10.21□□□□□ -0.77
SMG1-204ENST00000561940 KRT82Q9NSB4 513 aa10.21□□□□□ -0.77
SMG1-204ENST00000561940 CSADQ9Y600 493 aa10.21□□□□□ -0.77
SMG1-204ENST00000561940 IGLV1-40P01703 118 aa10.2□□□□□ -0.78
SMG1-204ENST00000561940 ID3Q02535 119 aa10.2□□□□□ -0.78
SMG1-204ENST00000561940 KIF4BQ2VIQ3 1234 aa10.2□□□□□ -0.78
SMG1-204ENST00000561940 ZMYM1Q5SVZ6 1142 aa10.2□□□□□ -0.78
SMG1-204ENST00000561940 LLGL2Q6P1M3 1020 aa10.2□□□□□ -0.78
SMG1-204ENST00000561940 SCAMP3O14828 347 aaKnown RBP10.19□□□□□ -0.78
SMG1-204ENST00000561940 NFIAQ12857 509 aa10.19□□□□□ -0.78
SMG1-204ENST00000561940 RNF43Q68DV7 783 aa10.19□□□□□ -0.78
SMG1-204ENST00000561940 SV2BQ7L1I2 683 aa10.19□□□□□ -0.78
SMG1-204ENST00000561940 SHISA5Q8N114 240 aa10.19□□□□□ -0.78
SMG1-204ENST00000561940 FBXL6Q8N531 539 aa10.19□□□□□ -0.78
SMG1-204ENST00000561940 MFSD14AQ96MC6 490 aa10.19□□□□□ -0.78
SMG1-204ENST00000561940 FANCD2OSQ96PS1 177 aa10.19□□□□□ -0.78
SMG1-204ENST00000561940 CRIM1Q9NZV1 1036 aa10.19□□□□□ -0.78
SMG1-204ENST00000561940 F6X3S4 739 aa10.18□□□□□ -0.78
SMG1-204ENST00000561940 TTBK2Q6IQ55 1244 aa10.18□□□□□ -0.78
SMG1-204ENST00000561940 PAOXQ6QHF9 649 aa10.18□□□□□ -0.78
SMG1-204ENST00000561940 ANKRD24Q8TF21 1146 aa10.18□□□□□ -0.78
SMG1-204ENST00000561940 DISC1Q9NRI5 854 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms