RNA–Protein interactions for RNA: ENST00000561668.5

PKD1-223, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 665 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-223ENST00000561668 TMEM39BQ9GZU3 492 aa22.92■■□□□ 1.26
PKD1-223ENST00000561668 EXOC6BQ9Y2D4 811 aa22.92■■□□□ 1.26
PKD1-223ENST00000561668 DAGLAQ9Y4D2 1042 aa22.92■■□□□ 1.26
PKD1-223ENST00000561668 RAB11FIP3O75154 756 aa22.91■■□□□ 1.26
PKD1-223ENST00000561668 MAP3K11Q16584 847 aa22.91■■□□□ 1.26
PKD1-223ENST00000561668 USP40Q9NVE5 1235 aa22.91■■□□□ 1.26
PKD1-223ENST00000561668 FZD1Q9UP38 647 aa22.91■■□□□ 1.26
PKD1-223ENST00000561668 LDHCP07864 332 aa22.9■■□□□ 1.26
PKD1-223ENST00000561668 GSTO1P78417 241 aa22.9■■□□□ 1.26
PKD1-223ENST00000561668 RHPN1Q8TCX5 695 aa22.9■■□□□ 1.26
PKD1-223ENST00000561668 DBNDD2Q9BQY9 259 aa22.9■■□□□ 1.26
PKD1-223ENST00000561668 DCTPP1Q9H773 170 aa22.9■■□□□ 1.26
PKD1-223ENST00000561668 RAI14Q9P0K7 980 aa22.9■■□□□ 1.26
PKD1-223ENST00000561668 LRP2BPQ9P2M1 347 aa22.9■■□□□ 1.26
PKD1-223ENST00000561668 THSD7BQ9C0I4 1608 aa22.9■■□□□ 1.26
PKD1-223ENST00000561668 USP2O75604 605 aaPredicted RBP22.89■■□□□ 1.25
PKD1-223ENST00000561668 HSPA8P11142 646 aaKnown RBP22.89■■□□□ 1.25
PKD1-223ENST00000561668 CDC42EP5Q6NZY7 148 aa22.89■■□□□ 1.25
PKD1-223ENST00000561668 ANKRD13AQ8IZ07 590 aa22.89■■□□□ 1.25
PKD1-223ENST00000561668 EAF2Q96CJ1 260 aaPredicted RBP22.89■■□□□ 1.25
PKD1-223ENST00000561668 KIF1BPQ96EK5 621 aa22.89■■□□□ 1.25
PKD1-223ENST00000561668 ZNF512BQ96KM6 892 aaPredicted RBP22.89■■□□□ 1.25
PKD1-223ENST00000561668 CSRNP1Q96S65 589 aa22.89■■□□□ 1.25
PKD1-223ENST00000561668 CCDC8Q9H0W5 538 aaPredicted RBP22.89■■□□□ 1.25
PKD1-223ENST00000561668 MCAMP43121 646 aa22.88■■□□□ 1.25
PKD1-223ENST00000561668 TNS4Q8IZW8 715 aa22.88■■□□□ 1.25
PKD1-223ENST00000561668 TEPSINQ96N21 525 aa22.88■■□□□ 1.25
PKD1-223ENST00000561668 APBB1O00213 710 aa22.87■■□□□ 1.25
PKD1-223ENST00000561668 MECOMQ03112 1051 aa22.87■■□□□ 1.25
PKD1-223ENST00000561668 MKRN3Q13064 507 aaKnown RBP22.87■■□□□ 1.25
PKD1-223ENST00000561668 PI16Q6UXB8 463 aa22.87■■□□□ 1.25
PKD1-223ENST00000561668 TBC1D9Q6ZT07 1266 aa22.87■■□□□ 1.25
PKD1-223ENST00000561668 FAM151AQ8WW52 585 aa22.87■■□□□ 1.25
PKD1-223ENST00000561668 FAM163AQ96GL9 167 aaPredicted RBP22.87■■□□□ 1.25
PKD1-223ENST00000561668 SNRKQ9NRH2 765 aa22.87■■□□□ 1.25
PKD1-223ENST00000561668 AACSQ86V21 672 aa22.86■■□□□ 1.25
PKD1-223ENST00000561668 CLASRPQ8N2M8 674 aaKnown RBP22.86■■□□□ 1.25
PKD1-223ENST00000561668 TSKSQ9UJT2 592 aa22.86■■□□□ 1.25
PKD1-223ENST00000561668 TRPA1O75762 1119 aa22.85■■□□□ 1.25
PKD1-223ENST00000561668 SREBF2Q12772 1141 aa22.85■■□□□ 1.25
PKD1-223ENST00000561668 TCP10Q12799 353 aa22.85■■□□□ 1.25
PKD1-223ENST00000561668 DCAF15Q66K64 600 aa22.85■■□□□ 1.25
PKD1-223ENST00000561668 NOL10Q9BSC4 688 aaKnown RBP22.85■■□□□ 1.25
PKD1-223ENST00000561668 BCL11AQ9H165 835 aa22.85■■□□□ 1.25
PKD1-223ENST00000561668 SAGE1Q9NXZ1 904 aa22.85■■□□□ 1.25
PKD1-223ENST00000561668 DBNLQ9UJU6 430 aaKnown RBP22.85■■□□□ 1.25
PKD1-223ENST00000561668 MAP3K9P80192 1104 aa22.84■■□□□ 1.25
PKD1-223ENST00000561668 HDAC1Q13547 482 aaPredicted RBP22.84■■□□□ 1.25
PKD1-223ENST00000561668 SPRYD7Q5W111 196 aa22.84■■□□□ 1.25
PKD1-223ENST00000561668 EXOC6Q8TAG9 804 aa22.84■■□□□ 1.25
PKD1-223ENST00000561668 CLMNQ96JQ2 1002 aa22.84■■□□□ 1.25
PKD1-223ENST00000561668 IL1RAPL2Q9NP60 686 aa22.84■■□□□ 1.25
PKD1-223ENST00000561668 RNF186Q9NXI6 227 aa22.84■■□□□ 1.25
PKD1-223ENST00000561668 CSADQ9Y600 493 aa22.84■■□□□ 1.25
PKD1-223ENST00000561668 MROH7-TTC4A0A0A0MT08 1334 aa22.83■■□□□ 1.25
PKD1-223ENST00000561668 GAKO14976 1311 aa22.83■■□□□ 1.25
PKD1-223ENST00000561668 ZBTB48P10074 688 aaPredicted RBP22.83■■□□□ 1.25
PKD1-223ENST00000561668 BTDP43251 543 aa22.83■■□□□ 1.25
PKD1-223ENST00000561668 INHBEP58166 350 aa22.83■■□□□ 1.25
PKD1-223ENST00000561668 SSC5DA1L4H1 1573 aa22.83■■□□□ 1.25
PKD1-223ENST00000561668 MYH2Q9UKX2 1941 aa22.82■■□□□ 1.24
PKD1-223ENST00000561668 IFIT2P09913 472 aaKnown RBP22.82■■□□□ 1.24
PKD1-223ENST00000561668 TM4SF4P48230 202 aa22.82■■□□□ 1.24
PKD1-223ENST00000561668 ZSCAN29Q8IWY8 852 aaPredicted RBP22.82■■□□□ 1.24
PKD1-223ENST00000561668 CDAN1Q8IWY9 1227 aa22.82■■□□□ 1.24
PKD1-223ENST00000561668 NSUN4Q96CB9 384 aaKnown RBP22.82■■□□□ 1.24
PKD1-223ENST00000561668 TLR7Q9NYK1 1049 aaKnown RBP22.82■■□□□ 1.24
PKD1-223ENST00000561668 GPR75-ASB3A0A0A6YYF3 556 aa22.81■■□□□ 1.24
PKD1-223ENST00000561668 MANSC4A6NHS7 340 aaPredicted RBP22.81■■□□□ 1.24
PKD1-223ENST00000561668 IGSF3O75054 1194 aa22.81■■□□□ 1.24
PKD1-223ENST00000561668 MAP4K4O95819 1239 aaPredicted RBP22.81■■□□□ 1.24
PKD1-223ENST00000561668 NFIAQ12857 509 aa22.81■■□□□ 1.24
PKD1-223ENST00000561668 IFFO2Q5TF58 517 aa22.81■■□□□ 1.24
PKD1-223ENST00000561668 NAA16Q6N069 864 aaPredicted RBP22.81■■□□□ 1.24
PKD1-223ENST00000561668 WNK4Q96J92 1243 aa22.81■■□□□ 1.24
PKD1-223ENST00000561668 ELP3Q9H9T3 547 aa22.81■■□□□ 1.24
PKD1-223ENST00000561668 AKAP11Q9UKA4 1901 aa22.8■■□□□ 1.24
PKD1-223ENST00000561668 ENTPD3O75355 529 aa22.8■■□□□ 1.24
PKD1-223ENST00000561668 BAG3O95817 575 aa22.8■■□□□ 1.24
PKD1-223ENST00000561668 CYP2E1P05181 493 aaPredicted RBP22.8■■□□□ 1.24
PKD1-223ENST00000561668 ZAP70P43403 619 aa22.8■■□□□ 1.24
PKD1-223ENST00000561668 RGS3P49796 1198 aa22.8■■□□□ 1.24
PKD1-223ENST00000561668 MIGA2Q7L4E1 593 aa22.8■■□□□ 1.24
PKD1-223ENST00000561668 IDI2Q9BXS1 227 aa22.8■■□□□ 1.24
PKD1-223ENST00000561668 ZNF341Q9BYN7 854 aa22.8■■□□□ 1.24
PKD1-223ENST00000561668 LRRCC1Q9C099 1032 aa22.8■■□□□ 1.24
PKD1-223ENST00000561668 FAM198AQ9UFP1 575 aa22.8■■□□□ 1.24
PKD1-223ENST00000561668 RPAP1Q9BWH6 1393 aaPredicted RBP22.79■■□□□ 1.24
PKD1-223ENST00000561668 WRNIP1Q96S55 665 aa22.79■■□□□ 1.24
PKD1-223ENST00000561668 PICALMQ13492 652 aa22.78■■□□□ 1.24
PKD1-223ENST00000561668 OTUD7BQ6GQQ9 843 aa22.78■■□□□ 1.24
PKD1-223ENST00000561668 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.78■■□□□ 1.24
PKD1-223ENST00000561668 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.78■■□□□ 1.24
PKD1-223ENST00000561668 OPTNQ96CV9 577 aa22.78■■□□□ 1.24
PKD1-223ENST00000561668 AK9Q5TCS8 1911 aa22.78■■□□□ 1.24
PKD1-223ENST00000561668 ALDH1A1P00352 501 aa22.77■■□□□ 1.24
PKD1-223ENST00000561668 PLCG2P16885 1265 aa22.77■■□□□ 1.24
PKD1-223ENST00000561668 VGLL4Q14135 290 aa22.77■■□□□ 1.24
PKD1-223ENST00000561668 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.77■■□□□ 1.24
PKD1-223ENST00000561668 IDH1O75874 414 aaKnown RBP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms