RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 MAP3K12Q12852 859 aa11.33□□□□□ -0.6
HERC1-206ENST00000559996 DIXDC1Q155Q3 683 aa11.33□□□□□ -0.6
HERC1-206ENST00000559996 SPTY2D1Q68D10 685 aaPredicted RBP11.33□□□□□ -0.6
HERC1-206ENST00000559996 POTEGQ6S5H5 508 aa11.33□□□□□ -0.6
HERC1-206ENST00000559996 CWC27Q6UX04 472 aaKnown RBP11.33□□□□□ -0.6
HERC1-206ENST00000559996 ZGPATQ8N5A5 531 aaKnown RBP11.33□□□□□ -0.6
HERC1-206ENST00000559996 AGBL3Q8NEM8 1001 aa11.33□□□□□ -0.6
HERC1-206ENST00000559996 APPBP2Q92624 585 aa11.33□□□□□ -0.6
HERC1-206ENST00000559996 HELLSQ9NRZ9 838 aa11.33□□□□□ -0.6
HERC1-206ENST00000559996 RAI14Q9P0K7 980 aa11.33□□□□□ -0.6
HERC1-206ENST00000559996 RNF181Q9P0P0 153 aa11.33□□□□□ -0.6
HERC1-206ENST00000559996 GAKO14976 1311 aa11.33□□□□□ -0.6
HERC1-206ENST00000559996 GPR75-ASB3A0A0A6YYF3 556 aa11.32□□□□□ -0.6
HERC1-206ENST00000559996 ZFYP08048 801 aaPredicted RBP11.32□□□□□ -0.6
HERC1-206ENST00000559996 CYP7A1P22680 504 aa11.32□□□□□ -0.6
HERC1-206ENST00000559996 PPP4CP60510 307 aa11.32□□□□□ -0.6
HERC1-206ENST00000559996 MCMDC2Q4G0Z9 681 aa11.32□□□□□ -0.6
HERC1-206ENST00000559996 APOBEC3HQ6NTF7 200 aaKnown RBP11.32□□□□□ -0.6
HERC1-206ENST00000559996 HHIPL2Q6UWX4 724 aa11.32□□□□□ -0.6
HERC1-206ENST00000559996 CCDC129Q6ZRS4 1044 aa11.32□□□□□ -0.6
HERC1-206ENST00000559996 KIAA0825Q8IV33 1275 aa11.32□□□□□ -0.6
HERC1-206ENST00000559996 FBXW7Q969H0 707 aa11.32□□□□□ -0.6
HERC1-206ENST00000559996 ZBED3Q96IU2 234 aaPredicted RBP11.32□□□□□ -0.6
HERC1-206ENST00000559996 TTF2Q9UNY4 1162 aaKnown RBP11.32□□□□□ -0.6
HERC1-206ENST00000559996 MAST3O60307 1309 aa11.32□□□□□ -0.6
HERC1-206ENST00000559996 F8W031 263 aaPredicted RBP11.31□□□□□ -0.6
HERC1-206ENST00000559996 HIP1O00291 1037 aa11.31□□□□□ -0.6
HERC1-206ENST00000559996 DDNO94850 711 aaPredicted RBP11.31□□□□□ -0.6
HERC1-206ENST00000559996 SCNN1DP51172 638 aa11.31□□□□□ -0.6
HERC1-206ENST00000559996 EIF6P56537 245 aaKnown RBP11.31□□□□□ -0.6
HERC1-206ENST00000559996 RHBDL3P58872 404 aa11.31□□□□□ -0.6
HERC1-206ENST00000559996 DYNLL1P63167 89 aaKnown RBP11.31□□□□□ -0.6
HERC1-206ENST00000559996 HDLBPQ00341 1268 aaKnown RBP11.31□□□□□ -0.6
HERC1-206ENST00000559996 PTH1RQ03431 593 aa11.31□□□□□ -0.6
HERC1-206ENST00000559996 TNIP1Q15025 636 aa11.31□□□□□ -0.6
HERC1-206ENST00000559996 NAA16Q6N069 864 aaPredicted RBP11.31□□□□□ -0.6
HERC1-206ENST00000559996 ZSCAN25Q6NSZ9 544 aa11.31□□□□□ -0.6
HERC1-206ENST00000559996 TMED8Q6PL24 325 aaPredicted RBP11.31□□□□□ -0.6
HERC1-206ENST00000559996 IFNL1Q8IU54 200 aa11.31□□□□□ -0.6
HERC1-206ENST00000559996 DPF2Q92785 391 aa11.31□□□□□ -0.6
HERC1-206ENST00000559996 STRBPQ96SI9 672 aaKnown RBP11.31□□□□□ -0.6
HERC1-206ENST00000559996 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.31□□□□□ -0.62e-11■■■■■ 34.1
HERC1-206ENST00000559996 LSG1Q9H089 658 aaKnown RBP11.31□□□□□ -0.6
HERC1-206ENST00000559996 COLQQ9Y215 455 aaPredicted RBP11.31□□□□□ -0.6
HERC1-206ENST00000559996 DAGLAQ9Y4D2 1042 aa11.31□□□□□ -0.6
HERC1-206ENST00000559996 MYH2Q9UKX2 1941 aa11.31□□□□□ -0.6
HERC1-206ENST00000559996 POTECB2RU33 542 aa11.3□□□□□ -0.6
HERC1-206ENST00000559996 EGFRP00533 1210 aa11.3□□□□□ -0.6
HERC1-206ENST00000559996 CRKP46108 304 aa11.3□□□□□ -0.6
HERC1-206ENST00000559996 GMPSP49915 693 aaPredicted RBP11.3□□□□□ -0.6
HERC1-206ENST00000559996 ZNF280AP59817 542 aaPredicted RBP11.3□□□□□ -0.6
HERC1-206ENST00000559996 VPS53Q5VIR6 699 aa11.3□□□□□ -0.6
HERC1-206ENST00000559996 GPC2Q8N158 579 aa11.3□□□□□ -0.6
HERC1-206ENST00000559996 LCORLQ8N3X6 602 aa11.3□□□□□ -0.6
HERC1-206ENST00000559996 USP26Q9BXU7 913 aa11.3□□□□□ -0.6
HERC1-206ENST00000559996 DIAPH3Q9NSV4 1193 aa11.3□□□□□ -0.6
HERC1-206ENST00000559996 MKRN1Q9UHC7 482 aaKnown RBP11.3□□□□□ -0.6
HERC1-206ENST00000559996 ADAMTSL1Q8N6G6 1762 aa11.3□□□□□ -0.6
HERC1-206ENST00000559996 MROH7-TTC4A0A0A0MT08 1334 aa11.3□□□□□ -0.6
HERC1-206ENST00000559996 MYO3BQ8WXR4 1341 aa11.3□□□□□ -0.6
HERC1-206ENST00000559996 GPAA1O43292 621 aa11.29□□□□□ -0.6
HERC1-206ENST00000559996 PRKAB2O43741 272 aa11.29□□□□□ -0.6
HERC1-206ENST00000559996 RPS12P25398 132 aaKnown RBP11.29□□□□□ -0.6
HERC1-206ENST00000559996 MIGA1Q8NAN2 632 aa11.29□□□□□ -0.6
HERC1-206ENST00000559996 MTMR14Q8NCE2 650 aa11.29□□□□□ -0.6
HERC1-206ENST00000559996 PRMT6Q96LA8 375 aaPredicted RBP11.29□□□□□ -0.6
HERC1-206ENST00000559996 ZDHHC15Q96MV8 337 aa11.29□□□□□ -0.6
HERC1-206ENST00000559996 ARMT1Q9H993 441 aa11.29□□□□□ -0.6
HERC1-206ENST00000559996 SERPINA10Q9UK55 444 aa11.29□□□□□ -0.6
HERC1-206ENST00000559996 RAD50Q92878 1312 aa11.29□□□□□ -0.6
HERC1-206ENST00000559996 TIAM2Q8IVF5 1701 aa11.29□□□□□ -0.6
HERC1-206ENST00000559996 MAST2Q6P0Q8 1798 aa11.28□□□□□ -0.6
HERC1-206ENST00000559996 GLTPD2A6NH11 291 aa11.28□□□□□ -0.6
HERC1-206ENST00000559996 GSG1L2A8MUP6 293 aa11.28□□□□□ -0.6
HERC1-206ENST00000559996 MBD4O95243 580 aa11.28□□□□□ -0.6
HERC1-206ENST00000559996 LDHCP07864 332 aa11.28□□□□□ -0.6
HERC1-206ENST00000559996 USP17L8P0C7I0 530 aa11.28□□□□□ -0.6
HERC1-206ENST00000559996 HSPD1P10809 573 aaKnown RBP11.28□□□□□ -0.6
HERC1-206ENST00000559996 EPS15P42566 896 aa11.28□□□□□ -0.6
HERC1-206ENST00000559996 LRRFIP1Q32MZ4 808 aaKnown RBP11.28□□□□□ -0.6
HERC1-206ENST00000559996 CFAP100Q494V2 611 aa11.28□□□□□ -0.6
HERC1-206ENST00000559996 DZIP1Q86YF9 867 aaKnown RBP11.28□□□□□ -0.6
HERC1-206ENST00000559996 MAP4K1Q92918 833 aa11.28□□□□□ -0.6
HERC1-206ENST00000559996 AATFQ9NY61 560 aaKnown RBP eCLIP11.28□□□□□ -0.6
HERC1-206ENST00000559996 CNOT7Q9UIV1 285 aaKnown RBP11.28□□□□□ -0.6
HERC1-206ENST00000559996 GJA3Q9Y6H8 435 aa11.28□□□□□ -0.6
HERC1-206ENST00000559996 CCDC171Q6TFL3 1326 aa11.28□□□□□ -0.6
HERC1-206ENST00000559996 MAGEB6P1A0A0J9YX57 407 aa11.27□□□□□ -0.61
HERC1-206ENST00000559996 PATL2C9JE40 543 aaKnown RBP11.27□□□□□ -0.61
HERC1-206ENST00000559996 BTDP43251 543 aa11.27□□□□□ -0.61
HERC1-206ENST00000559996 MMP14P50281 582 aa11.27□□□□□ -0.61
HERC1-206ENST00000559996 HIRAP54198 1017 aaPredicted RBP11.27□□□□□ -0.61
HERC1-206ENST00000559996 GSTO1P78417 241 aa11.27□□□□□ -0.61
HERC1-206ENST00000559996 CDC42EP5Q6NZY7 148 aa11.27□□□□□ -0.61
HERC1-206ENST00000559996 SH3RF3Q8TEJ3 882 aaPredicted RBP11.27□□□□□ -0.61
HERC1-206ENST00000559996 RUFY2Q8WXA3 655 aa11.27□□□□□ -0.61
HERC1-206ENST00000559996 TEKT1Q969V4 418 aa11.27□□□□□ -0.61
HERC1-206ENST00000559996 L3MBTL3Q96JM7 780 aaPredicted RBP11.27□□□□□ -0.61
HERC1-206ENST00000559996 EPB41L4AQ9HCS5 686 aaPredicted RBP11.27□□□□□ -0.61
HERC1-206ENST00000559996 GPRC5DQ9NZD1 345 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms