RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 PPP2R3BQ9Y5P8 575 aa19.33■□□□□ 0.68
RABGGTA-206ENST00000558649 GAKO14976 1311 aa19.32■□□□□ 0.68
RABGGTA-206ENST00000558649 RASSF10A6NK89 507 aa19.32■□□□□ 0.68
RABGGTA-206ENST00000558649 NAA16Q6N069 864 aaPredicted RBP19.32■□□□□ 0.68
RABGGTA-206ENST00000558649 MOB2Q70IA6 237 aa19.32■□□□□ 0.68
RABGGTA-206ENST00000558649 BOLA2Q9H3K6 86 aa19.32■□□□□ 0.68
RABGGTA-206ENST00000558649 RWDD1Q9H446 243 aaPredicted RBP19.32■□□□□ 0.68
RABGGTA-206ENST00000558649 FZD1Q9UP38 647 aa19.32■□□□□ 0.68
RABGGTA-206ENST00000558649 SSC5DA1L4H1 1573 aa19.32■□□□□ 0.68
RABGGTA-206ENST00000558649 GOLIM4O00461 696 aa19.31■□□□□ 0.68
RABGGTA-206ENST00000558649 NBPF12Q5TAG4 269 aaPredicted RBP19.31■□□□□ 0.68
RABGGTA-206ENST00000558649 ANKRD45Q5TZF3 282 aa19.31■□□□□ 0.68
RABGGTA-206ENST00000558649 TSHZ3Q63HK5 1081 aa19.31■□□□□ 0.68
RABGGTA-206ENST00000558649 CYP4F22Q6NT55 531 aa19.31■□□□□ 0.68
RABGGTA-206ENST00000558649 CDAN1Q8IWY9 1227 aa19.31■□□□□ 0.68
RABGGTA-206ENST00000558649 GPATCH3Q96I76 525 aa19.31■□□□□ 0.68
RABGGTA-206ENST00000558649 LDHCP07864 332 aa19.3■□□□□ 0.68
RABGGTA-206ENST00000558649 VEGFBP49765 207 aa19.3■□□□□ 0.68
RABGGTA-206ENST00000558649 TCP10Q12799 353 aa19.3■□□□□ 0.68
RABGGTA-206ENST00000558649 GCC1Q96CN9 775 aa19.3■□□□□ 0.68
RABGGTA-206ENST00000558649 EDC3Q96F86 508 aaKnown RBP19.3■□□□□ 0.68
RABGGTA-206ENST00000558649 NOL10Q9BSC4 688 aaKnown RBP19.3■□□□□ 0.68
RABGGTA-206ENST00000558649 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.3■□□□□ 0.68
RABGGTA-206ENST00000558649 AK9Q5TCS8 1911 aa19.29■□□□□ 0.68
RABGGTA-206ENST00000558649 IGHDP01880 384 aa19.29■□□□□ 0.68
RABGGTA-206ENST00000558649 ATP5JP18859 108 aa19.29■□□□□ 0.68
RABGGTA-206ENST00000558649 NFIAQ12857 509 aa19.29■□□□□ 0.68
RABGGTA-206ENST00000558649 B4GALNT3Q6L9W6 998 aa19.29■□□□□ 0.68
RABGGTA-206ENST00000558649 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.29■□□□□ 0.68
RABGGTA-206ENST00000558649 CAPNS2Q96L46 248 aa19.29■□□□□ 0.68
RABGGTA-206ENST00000558649 ECHDC1Q9NTX5 307 aa19.29■□□□□ 0.68
RABGGTA-206ENST00000558649 CEP350Q5VT06 3117 aa19.29■□□□□ 0.68
RABGGTA-206ENST00000558649 UBE2Q2LH0YL09 131 aa19.28■□□□□ 0.68
RABGGTA-206ENST00000558649 PICALMQ13492 652 aa19.28■□□□□ 0.68
RABGGTA-206ENST00000558649 TTF1Q15361 905 aaPredicted RBP19.28■□□□□ 0.68
RABGGTA-206ENST00000558649 SUPT20HL1Q3ZLR7 823 aa19.28■□□□□ 0.68
RABGGTA-206ENST00000558649 ADGRA1Q86SQ6 560 aa19.28■□□□□ 0.68
RABGGTA-206ENST00000558649 MAGEB6Q8N7X4 407 aa19.28■□□□□ 0.68
RABGGTA-206ENST00000558649 OTUD7AQ8TE49 926 aaPredicted RBP19.28■□□□□ 0.68
RABGGTA-206ENST00000558649 FAM163AQ96GL9 167 aaPredicted RBP19.28■□□□□ 0.68
RABGGTA-206ENST00000558649 PAG1Q9NWQ8 432 aa19.28■□□□□ 0.68
RABGGTA-206ENST00000558649 AATFQ9NY61 560 aaKnown RBP eCLIP19.28■□□□□ 0.68
RABGGTA-206ENST00000558649 ANGEL1Q9UNK9 670 aaKnown RBP19.28■□□□□ 0.68
RABGGTA-206ENST00000558649 WDR33Q9C0J8 1336 aaKnown RBP19.27■□□□□ 0.68
RABGGTA-206ENST00000558649 OTOFQ9HC10 1997 aa19.27■□□□□ 0.68
RABGGTA-206ENST00000558649 GPR75-ASB3A0A0A6YYF3 556 aa19.27■□□□□ 0.68
RABGGTA-206ENST00000558649 CYP7A1P22680 504 aa19.27■□□□□ 0.68
RABGGTA-206ENST00000558649 FKBP1BP68106 108 aa19.27■□□□□ 0.68
RABGGTA-206ENST00000558649 MAP3K12Q12852 859 aa19.27■□□□□ 0.68
RABGGTA-206ENST00000558649 FKBP1CQ5VVH2 108 aa19.27■□□□□ 0.68
RABGGTA-206ENST00000558649 ARMC9Q7Z3E5 817 aa19.27■□□□□ 0.68
RABGGTA-206ENST00000558649 TEPSINQ96N21 525 aa19.27■□□□□ 0.68
RABGGTA-206ENST00000558649 CDK5RAP2Q96SN8 1893 aa19.26■□□□□ 0.67
RABGGTA-206ENST00000558649 MYH7P12883 1935 aa19.26■□□□□ 0.67
RABGGTA-206ENST00000558649 ECE1P42892 770 aa19.26■□□□□ 0.67
RABGGTA-206ENST00000558649 RGS3P49796 1198 aa19.26■□□□□ 0.67
RABGGTA-206ENST00000558649 ZNF157P51786 506 aaPredicted RBP19.26■□□□□ 0.67
RABGGTA-206ENST00000558649 RGMBQ6NW40 437 aa19.26■□□□□ 0.67
RABGGTA-206ENST00000558649 FAM83AQ86UY5 434 aa19.26■□□□□ 0.67
RABGGTA-206ENST00000558649 HAUS7Q99871 368 aa19.26■□□□□ 0.67
RABGGTA-206ENST00000558649 FAM198AQ9UFP1 575 aa19.26■□□□□ 0.67
RABGGTA-206ENST00000558649 PPP1R12BO60237 982 aaPredicted RBP19.25■□□□□ 0.67
RABGGTA-206ENST00000558649 AOC2O75106 756 aa19.25■□□□□ 0.67
RABGGTA-206ENST00000558649 MIGA1Q8NAN2 632 aa19.25■□□□□ 0.67
RABGGTA-206ENST00000558649 SH3RF3Q8TEJ3 882 aaPredicted RBP19.25■□□□□ 0.67
RABGGTA-206ENST00000558649 FAM151AQ8WW52 585 aa19.25■□□□□ 0.67
RABGGTA-206ENST00000558649 HHIPL1Q96JK4 782 aa19.25■□□□□ 0.67
RABGGTA-206ENST00000558649 THSD7BQ9C0I4 1608 aa19.25■□□□□ 0.67
RABGGTA-206ENST00000558649 RFX7Q2KHR2 1363 aa19.24■□□□□ 0.67
RABGGTA-206ENST00000558649 RPAP1Q9BWH6 1393 aaPredicted RBP19.24■□□□□ 0.67
RABGGTA-206ENST00000558649 FOCADQ5VW36 1801 aa19.24■□□□□ 0.67
RABGGTA-206ENST00000558649 WDHD1O75717 1129 aaPredicted RBP19.24■□□□□ 0.67
RABGGTA-206ENST00000558649 BAG3O95817 575 aa19.24■□□□□ 0.67
RABGGTA-206ENST00000558649 MAP4K4O95819 1239 aaPredicted RBP19.24■□□□□ 0.67
RABGGTA-206ENST00000558649 MX1P20591 662 aa19.24■□□□□ 0.67
RABGGTA-206ENST00000558649 RHBDL3P58872 404 aa19.24■□□□□ 0.67
RABGGTA-206ENST00000558649 SLC9C2Q5TAH2 1124 aa19.24■□□□□ 0.67
RABGGTA-206ENST00000558649 ZSCAN29Q8IWY8 852 aaPredicted RBP19.24■□□□□ 0.67
RABGGTA-206ENST00000558649 ZFPM1Q8IX07 1006 aa19.24■□□□□ 0.67
RABGGTA-206ENST00000558649 TEX11Q8IYF3 940 aa19.24■□□□□ 0.67
RABGGTA-206ENST00000558649 LNPKQ9C0E8 428 aa19.24■□□□□ 0.67
RABGGTA-206ENST00000558649 DDX4Q9NQI0 724 aaKnown RBP19.24■□□□□ 0.67
RABGGTA-206ENST00000558649 PDE6AP16499 860 aa19.23■□□□□ 0.67
RABGGTA-206ENST00000558649 IREB2P48200 963 aaKnown RBP19.23■□□□□ 0.67
RABGGTA-206ENST00000558649 DYNLL1P63167 89 aaKnown RBP19.23■□□□□ 0.67
RABGGTA-206ENST00000558649 SMC5Q8IY18 1101 aa19.23■□□□□ 0.67
RABGGTA-206ENST00000558649 IDI2Q9BXS1 227 aa19.23■□□□□ 0.67
RABGGTA-206ENST00000558649 TTC41PQ6P2S7 1318 aa19.23■□□□□ 0.67
RABGGTA-206ENST00000558649 JMYQ8N9B5 988 aa19.22■□□□□ 0.67
RABGGTA-206ENST00000558649 ZNF532Q9HCE3 1301 aa19.22■□□□□ 0.67
RABGGTA-206ENST00000558649 ERC2O15083 957 aa19.21■□□□□ 0.67
RABGGTA-206ENST00000558649 ENTPD3O75355 529 aa19.21■□□□□ 0.67
RABGGTA-206ENST00000558649 USP2O75604 605 aaPredicted RBP19.21■□□□□ 0.67
RABGGTA-206ENST00000558649 PLCG2P16885 1265 aa19.21■□□□□ 0.67
RABGGTA-206ENST00000558649 MKRN3Q13064 507 aaKnown RBP19.21■□□□□ 0.67
RABGGTA-206ENST00000558649 MIGA2Q7L4E1 593 aa19.21■□□□□ 0.67
RABGGTA-206ENST00000558649 RASAL3Q86YV0 1011 aa19.21■□□□□ 0.67
RABGGTA-206ENST00000558649 HOOK2Q96ED9 719 aa19.21■□□□□ 0.67
RABGGTA-206ENST00000558649 CLMNQ96JQ2 1002 aa19.21■□□□□ 0.67
RABGGTA-206ENST00000558649 CSRNP1Q96S65 589 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms