RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 ZKSCAN4Q969J2 545 aaPredicted RBP13.95□□□□□ -0.18
RABGGTA-204ENST00000558376 UTYO14607 1347 aa13.94□□□□□ -0.18
RABGGTA-204ENST00000558376 TLR2O60603 784 aa13.94□□□□□ -0.18
RABGGTA-204ENST00000558376 TRIM27P14373 513 aa13.94□□□□□ -0.18
RABGGTA-204ENST00000558376 BCAMP50895 628 aa13.94□□□□□ -0.18
RABGGTA-204ENST00000558376 SLC4A8Q2Y0W8 1093 aa13.94□□□□□ -0.18
RABGGTA-204ENST00000558376 APOBEC3HQ6NTF7 200 aaKnown RBP13.94□□□□□ -0.18
RABGGTA-204ENST00000558376 NBPF11Q86T75 865 aa13.94□□□□□ -0.18
RABGGTA-204ENST00000558376 ERO1BQ86YB8 467 aa13.94□□□□□ -0.18
RABGGTA-204ENST00000558376 ANKRD44Q8N8A2 993 aa13.94□□□□□ -0.18
RABGGTA-204ENST00000558376 VGLL2Q8N8G2 317 aa13.94□□□□□ -0.18
RABGGTA-204ENST00000558376 CCDC136Q96JN2 1154 aa13.94□□□□□ -0.18
RABGGTA-204ENST00000558376 BICC1Q9H694 974 aaKnown RBP13.94□□□□□ -0.18
RABGGTA-204ENST00000558376 COLQQ9Y215 455 aaPredicted RBP13.94□□□□□ -0.18
RABGGTA-204ENST00000558376 IRF6O14896 467 aa13.93□□□□□ -0.18
RABGGTA-204ENST00000558376 CETPP11597 493 aa13.93□□□□□ -0.18
RABGGTA-204ENST00000558376 PDE3AQ14432 1141 aa13.93□□□□□ -0.18
RABGGTA-204ENST00000558376 RABL6Q3YEC7 729 aaPredicted RBP13.93□□□□□ -0.18
RABGGTA-204ENST00000558376 VPS37DQ86XT2 251 aa13.93□□□□□ -0.18
RABGGTA-204ENST00000558376 TBC1D22AQ8WUA7 517 aa13.93□□□□□ -0.18
RABGGTA-204ENST00000558376 TEKT1Q969V4 418 aa13.93□□□□□ -0.18
RABGGTA-204ENST00000558376 ZDHHC15Q96MV8 337 aa13.93□□□□□ -0.18
RABGGTA-204ENST00000558376 WRNIP1Q96S55 665 aa13.93□□□□□ -0.18
RABGGTA-204ENST00000558376 MRIQ9BWK5 157 aa13.93□□□□□ -0.18
RABGGTA-204ENST00000558376 LACTBP83111 547 aaPredicted RBP13.93□□□□□ -0.18
RABGGTA-204ENST00000558376 METTL24Q5JXM2 366 aa13.93□□□□□ -0.18
RABGGTA-204ENST00000558376 AK9Q5TCS8 1911 aa13.92□□□□□ -0.18
RABGGTA-204ENST00000558376 FRAT2O75474 233 aaPredicted RBP13.92□□□□□ -0.18
RABGGTA-204ENST00000558376 ECM2O94769 699 aaPredicted RBP13.92□□□□□ -0.18
RABGGTA-204ENST00000558376 PDE8BO95263 885 aa13.92□□□□□ -0.18
RABGGTA-204ENST00000558376 CTGFP29279 349 aa13.92□□□□□ -0.18
RABGGTA-204ENST00000558376 PPIL2Q13356 520 aa13.92□□□□□ -0.18
RABGGTA-204ENST00000558376 SNAPC2Q13487 334 aa13.92□□□□□ -0.18
RABGGTA-204ENST00000558376 FKBP1CQ5VVH2 108 aa13.92□□□□□ -0.18
RABGGTA-204ENST00000558376 ATF7IPQ6VMQ6 1270 aa13.92□□□□□ -0.18
RABGGTA-204ENST00000558376 FAM83AQ86UY5 434 aa13.92□□□□□ -0.18
RABGGTA-204ENST00000558376 KLHDC4Q8TBB5 520 aa13.92□□□□□ -0.18
RABGGTA-204ENST00000558376 ZCCHC17Q9NP64 241 aaKnown RBP13.92□□□□□ -0.18
RABGGTA-204ENST00000558376 INPP5BP32019 993 aa13.91□□□□□ -0.18
RABGGTA-204ENST00000558376 CAVIN4Q5BKX8 364 aa13.91□□□□□ -0.18
RABGGTA-204ENST00000558376 C17orf99Q6UX52 265 aa13.91□□□□□ -0.18
RABGGTA-204ENST00000558376 MIGA2Q7L4E1 593 aa13.91□□□□□ -0.18
RABGGTA-204ENST00000558376 H0YGN5 161 aa13.91□□□□□ -0.18
RABGGTA-204ENST00000558376 TMOD2Q9NZR1 351 aa13.91□□□□□ -0.18
RABGGTA-204ENST00000558376 WDHD1O75717 1129 aaPredicted RBP13.9□□□□□ -0.18
RABGGTA-204ENST00000558376 FGFR2P21802 821 aa13.9□□□□□ -0.18
RABGGTA-204ENST00000558376 KIF22Q14807 665 aa13.9□□□□□ -0.18
RABGGTA-204ENST00000558376 MTFR1Q15390 333 aa13.9□□□□□ -0.18
RABGGTA-204ENST00000558376 HHIPL2Q6UWX4 724 aa13.9□□□□□ -0.18
RABGGTA-204ENST00000558376 FTSJ3Q8IY81 847 aaKnown RBP13.9□□□□□ -0.18
RABGGTA-204ENST00000558376 ZNF341Q9BYN7 854 aa13.9□□□□□ -0.18
RABGGTA-204ENST00000558376 CPA4Q9UI42 421 aa13.9□□□□□ -0.18
RABGGTA-204ENST00000558376 MYH13Q9UKX3 1938 aa13.89□□□□□ -0.19
RABGGTA-204ENST00000558376 IPO8O15397 1037 aaKnown RBP13.89□□□□□ -0.19
RABGGTA-204ENST00000558376 SUGT1Q9Y2Z0 365 aa13.89□□□□□ -0.19
RABGGTA-204ENST00000558376 PPATQ06203 517 aa13.89□□□□□ -0.19
RABGGTA-204ENST00000558376 MOGSQ13724 837 aa13.89□□□□□ -0.19
RABGGTA-204ENST00000558376 DCAF15Q66K64 600 aa13.89□□□□□ -0.19
RABGGTA-204ENST00000558376 TMEM57Q8N5G2 664 aa13.89□□□□□ -0.19
RABGGTA-204ENST00000558376 SHISA4Q96DD7 197 aa13.89□□□□□ -0.19
RABGGTA-204ENST00000558376 TRIM47Q96LD4 638 aa13.89□□□□□ -0.19
RABGGTA-204ENST00000558376 ZNF112Q9UJU3 913 aa13.89□□□□□ -0.19
RABGGTA-204ENST00000558376 GNRH1P01148 92 aa13.88□□□□□ -0.19
RABGGTA-204ENST00000558376 PSMC4P43686 418 aa13.88□□□□□ -0.19
RABGGTA-204ENST00000558376 PRMT2P55345 433 aa13.88□□□□□ -0.19
RABGGTA-204ENST00000558376 FAM151AQ8WW52 585 aa13.88□□□□□ -0.19
RABGGTA-204ENST00000558376 HOOK2Q96ED9 719 aa13.88□□□□□ -0.19
RABGGTA-204ENST00000558376 SRRDQ9UH36 339 aa13.88□□□□□ -0.19
RABGGTA-204ENST00000558376 ADGRA2Q96PE1 1338 aa13.88□□□□□ -0.19
RABGGTA-204ENST00000558376 RPAP1Q9BWH6 1393 aaPredicted RBP13.88□□□□□ -0.19
RABGGTA-204ENST00000558376 PDHXO00330 501 aa13.87□□□□□ -0.19
RABGGTA-204ENST00000558376 MAST3O60307 1309 aa13.87□□□□□ -0.19
RABGGTA-204ENST00000558376 OSBPP22059 807 aa13.87□□□□□ -0.19
RABGGTA-204ENST00000558376 RFX5P48382 616 aaPredicted RBP13.87□□□□□ -0.19
RABGGTA-204ENST00000558376 CDC42EP5Q6NZY7 148 aa13.87□□□□□ -0.19
RABGGTA-204ENST00000558376 ANKRD23Q86SG2 305 aa13.87□□□□□ -0.19
RABGGTA-204ENST00000558376 KIF16BQ96L93 1317 aa13.87□□□□□ -0.19
RABGGTA-204ENST00000558376 USP44Q9H0E7 712 aa13.87□□□□□ -0.19
RABGGTA-204ENST00000558376 KCNH4Q9UQ05 1017 aa13.87□□□□□ -0.19
RABGGTA-204ENST00000558376 IFIT1P09914 478 aaKnown RBP13.87□□□□□ -0.19
RABGGTA-204ENST00000558376 TCP10Q12799 353 aa13.87□□□□□ -0.19
RABGGTA-204ENST00000558376 NFIAQ12857 509 aa13.87□□□□□ -0.19
RABGGTA-204ENST00000558376 MVPQ14764 893 aaKnown RBP13.87□□□□□ -0.19
RABGGTA-204ENST00000558376 PUM3Q15397 648 aaKnown RBP13.87□□□□□ -0.19
RABGGTA-204ENST00000558376 ITPRIPQ8IWB1 547 aa13.87□□□□□ -0.19
RABGGTA-204ENST00000558376 DAGLAQ9Y4D2 1042 aa13.87□□□□□ -0.19
RABGGTA-204ENST00000558376 MGAMO43451 1857 aa13.86□□□□□ -0.19
RABGGTA-204ENST00000558376 DIXDC1Q155Q3 683 aa13.86□□□□□ -0.19
RABGGTA-204ENST00000558376 EYA2O00167 538 aa13.85□□□□□ -0.19
RABGGTA-204ENST00000558376 FMNL1O95466 1100 aaPredicted RBP13.85□□□□□ -0.19
RABGGTA-204ENST00000558376 GPAT2Q6NUI2 795 aa13.85□□□□□ -0.19
RABGGTA-204ENST00000558376 ZFPM1Q8IX07 1006 aa13.85□□□□□ -0.19
RABGGTA-204ENST00000558376 WDR66Q8TBY9 1149 aa13.85□□□□□ -0.19
RABGGTA-204ENST00000558376 ARHGAP45Q92619 1136 aa13.85□□□□□ -0.19
RABGGTA-204ENST00000558376 FAM198AQ9UFP1 575 aa13.85□□□□□ -0.19
RABGGTA-204ENST00000558376 DOCK3Q8IZD9 2030 aa13.85□□□□□ -0.19
RABGGTA-204ENST00000558376 GRK4P32298 578 aa13.84□□□□□ -0.19
RABGGTA-204ENST00000558376 NOL9Q5SY16 702 aaKnown RBP13.84□□□□□ -0.19
RABGGTA-204ENST00000558376 CHRDL2Q6WN34 429 aa13.84□□□□□ -0.19
RABGGTA-204ENST00000558376 ATG9AQ7Z3C6 839 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms