RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 KIF28PB7ZC32 967 aa12.35□□□□□ -0.43
TPM1-210ENST00000558264 RPS6KA4O75676 772 aa12.35□□□□□ -0.43
TPM1-210ENST00000558264 CHAF1AQ13111 956 aaPredicted RBP12.35□□□□□ -0.43
TPM1-210ENST00000558264 SF3B3Q15393 1217 aaKnown RBP12.35□□□□□ -0.43
TPM1-210ENST00000558264 ZSCAN30Q86W11 494 aa12.35□□□□□ -0.43
TPM1-210ENST00000558264 ERCC4Q92889 916 aaPredicted RBP12.35□□□□□ -0.43
TPM1-210ENST00000558264 GOLPH3LQ9H4A5 285 aa12.35□□□□□ -0.43
TPM1-210ENST00000558264 BSDC1Q9NW68 430 aaPredicted RBP12.35□□□□□ -0.43
TPM1-210ENST00000558264 CFAP45Q9UL16 551 aa12.35□□□□□ -0.43
TPM1-210ENST00000558264 BCORQ6W2J9 1755 aa12.35□□□□□ -0.43
TPM1-210ENST00000558264 IFIT3O14879 490 aaKnown RBP12.34□□□□□ -0.43
TPM1-210ENST00000558264 ME1P48163 572 aa12.34□□□□□ -0.43
TPM1-210ENST00000558264 SLC4A8Q2Y0W8 1093 aa12.34□□□□□ -0.43
TPM1-210ENST00000558264 CMTR1Q8N1G2 835 aaKnown RBP12.34□□□□□ -0.43
TPM1-210ENST00000558264 FBXL16Q8N461 479 aa12.34□□□□□ -0.43
TPM1-210ENST00000558264 FAM84BQ96KN1 310 aaPredicted RBP12.34□□□□□ -0.43
TPM1-210ENST00000558264 AP5Z1O43299 807 aa12.34□□□□□ -0.43
TPM1-210ENST00000558264 DHX16O60231 1041 aaKnown RBP12.34□□□□□ -0.43
TPM1-210ENST00000558264 ADCY5O95622 1261 aa12.34□□□□□ -0.43
TPM1-210ENST00000558264 EVX2Q03828 476 aa12.34□□□□□ -0.43
TPM1-210ENST00000558264 TYRO3Q06418 890 aa12.34□□□□□ -0.43
TPM1-210ENST00000558264 CAVIN4Q5BKX8 364 aa12.34□□□□□ -0.43
TPM1-210ENST00000558264 CCAR1Q8IX12 1150 aaKnown RBP12.34□□□□□ -0.43
TPM1-210ENST00000558264 IGDCC4Q8TDY8 1250 aa12.34□□□□□ -0.43
TPM1-210ENST00000558264 ZNF830Q96NB3 372 aaPredicted RBP12.34□□□□□ -0.43
TPM1-210ENST00000558264 NLRP3Q96P20 1036 aa12.34□□□□□ -0.43
TPM1-210ENST00000558264 LY9Q9HBG7 655 aa12.34□□□□□ -0.43
TPM1-210ENST00000558264 CLIC4Q9Y696 253 aa12.34□□□□□ -0.43
TPM1-210ENST00000558264 BTAF1O14981 1849 aa12.34□□□□□ -0.43
TPM1-210ENST00000558264 CCDC192P0DO97 292 aa12.34□□□□□ -0.43
TPM1-210ENST00000558264 MSNP26038 577 aaKnown RBP12.34□□□□□ -0.43
TPM1-210ENST00000558264 RPS8P62241 208 aaKnown RBP12.34□□□□□ -0.43
TPM1-210ENST00000558264 MFSD6Q6ZSS7 791 aa12.34□□□□□ -0.43
TPM1-210ENST00000558264 TXNRD3Q86VQ6 643 aa12.34□□□□□ -0.43
TPM1-210ENST00000558264 FBXW7Q969H0 707 aa12.34□□□□□ -0.43
TPM1-210ENST00000558264 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.34□□□□□ -0.43
TPM1-210ENST00000558264 MRVI1Q9Y6F6 885 aa12.34□□□□□ -0.43
TPM1-210ENST00000558264 ZMYM6O95789 1325 aa12.33□□□□□ -0.44
TPM1-210ENST00000558264 GOLGA8AA7E2F4 631 aa12.33□□□□□ -0.44
TPM1-210ENST00000558264 ZBTB43O43298 467 aa12.33□□□□□ -0.44
TPM1-210ENST00000558264 AKNAD1Q5T1N1 836 aa12.33□□□□□ -0.44
TPM1-210ENST00000558264 FAM196AQ6ZSG2 479 aa12.33□□□□□ -0.44
TPM1-210ENST00000558264 LUZP1Q86V48 1076 aa12.33□□□□□ -0.44
TPM1-210ENST00000558264 ZNF384Q8TF68 577 aa12.33□□□□□ -0.44
TPM1-210ENST00000558264 MAGEB6P1A0A0J9YX57 407 aa12.33□□□□□ -0.44
TPM1-210ENST00000558264 PRDM1O75626 825 aa12.33□□□□□ -0.44
TPM1-210ENST00000558264 FBXO18Q8NFZ0 1043 aa12.33□□□□□ -0.44
TPM1-210ENST00000558264 GPR101Q96P66 508 aaPredicted RBP12.33□□□□□ -0.44
TPM1-210ENST00000558264 ALG1Q9BT22 464 aa12.33□□□□□ -0.44
TPM1-210ENST00000558264 NACAP1Q9BZK3 213 aa12.33□□□□□ -0.44
TPM1-210ENST00000558264 CLSTN2Q9H4D0 955 aa12.33□□□□□ -0.44
TPM1-210ENST00000558264 GNL3LQ9NVN8 582 aaKnown RBP12.33□□□□□ -0.44
TPM1-210ENST00000558264 LAMB2P55268 1798 aa12.33□□□□□ -0.44
TPM1-210ENST00000558264 ZNF804BA4D1E1 1349 aa12.32□□□□□ -0.44
TPM1-210ENST00000558264 RANBP6O60518 1105 aaKnown RBP12.32□□□□□ -0.44
TPM1-210ENST00000558264 RFC4P35249 363 aa12.32□□□□□ -0.44
TPM1-210ENST00000558264 UBE4AQ14139 1066 aa12.32□□□□□ -0.44
TPM1-210ENST00000558264 ANO6Q4KMQ2 910 aa12.32□□□□□ -0.44
TPM1-210ENST00000558264 GJD4Q96KN9 370 aaPredicted RBP12.32□□□□□ -0.44
TPM1-210ENST00000558264 ZNF396Q96N95 335 aaPredicted RBP12.32□□□□□ -0.44
TPM1-210ENST00000558264 RCOR1Q9UKL0 485 aa12.32□□□□□ -0.44
TPM1-210ENST00000558264 CICQ96RK0 1608 aaPredicted RBP12.32□□□□□ -0.44
TPM1-210ENST00000558264 DOCK2Q92608 1830 aa12.32□□□□□ -0.44
TPM1-210ENST00000558264 CCDC69A6NI79 296 aa12.32□□□□□ -0.44
TPM1-210ENST00000558264 ALX1Q15699 326 aa12.32□□□□□ -0.44
TPM1-210ENST00000558264 TPTE2Q6XPS3 522 aa12.32□□□□□ -0.44
TPM1-210ENST00000558264 LRRC4BQ9NT99 713 aa12.32□□□□□ -0.44
TPM1-210ENST00000558264 FAM217BQ9NTX9 383 aaPredicted RBP12.32□□□□□ -0.44
TPM1-210ENST00000558264 DDX19AQ9NUU7 478 aaKnown RBP12.32□□□□□ -0.44
TPM1-210ENST00000558264 SLC12A7Q9Y666 1083 aa12.32□□□□□ -0.44
TPM1-210ENST00000558264 AFF2P51816 1311 aa12.31□□□□□ -0.44
TPM1-210ENST00000558264 PRDX5P30044 214 aa12.31□□□□□ -0.44
TPM1-210ENST00000558264 PPARAQ07869 468 aa12.31□□□□□ -0.44
TPM1-210ENST00000558264 FSIP1Q8NA03 581 aa12.31□□□□□ -0.44
TPM1-210ENST00000558264 NUP133Q8WUM0 1156 aa12.31□□□□□ -0.44
TPM1-210ENST00000558264 NAP1L5Q96NT1 182 aaPredicted RBP12.31□□□□□ -0.44
TPM1-210ENST00000558264 SLC26A6Q9BXS9 759 aa12.31□□□□□ -0.44
TPM1-210ENST00000558264 NYXQ9GZU5 481 aa12.31□□□□□ -0.44
TPM1-210ENST00000558264 A0A1B0GVL5 298 aa12.31□□□□□ -0.44
TPM1-210ENST00000558264 TMEM87BQ96K49 555 aa12.31□□□□□ -0.44
TPM1-210ENST00000558264 DNAJC25Q9H1X3 360 aa12.31□□□□□ -0.44
TPM1-210ENST00000558264 PCDHA7Q9UN72 937 aa12.31□□□□□ -0.44
TPM1-210ENST00000558264 PNPLA7Q6ZV29 1317 aa12.31□□□□□ -0.44
TPM1-210ENST00000558264 WDR19Q8NEZ3 1342 aa12.31□□□□□ -0.44
TPM1-210ENST00000558264 CASZ1Q86V15 1759 aa12.3□□□□□ -0.44
TPM1-210ENST00000558264 SCN7AQ01118 1682 aa12.3□□□□□ -0.44
TPM1-210ENST00000558264 GUCY1A2P33402 732 aa12.3□□□□□ -0.44
TPM1-210ENST00000558264 KIF23Q02241 960 aaPredicted RBP12.3□□□□□ -0.44
TPM1-210ENST00000558264 STK38Q15208 465 aa12.3□□□□□ -0.44
TPM1-210ENST00000558264 SF3A1Q15459 793 aaKnown RBP12.3□□□□□ -0.44
TPM1-210ENST00000558264 SLC10A5Q5PT55 438 aa12.3□□□□□ -0.44
TPM1-210ENST00000558264 RC3H1Q5TC82 1133 aaKnown RBP12.3□□□□□ -0.44
TPM1-210ENST00000558264 SEPT12Q8IYM1 358 aa12.3□□□□□ -0.44
TPM1-210ENST00000558264 SPC24Q8NBT2 197 aa12.3□□□□□ -0.44
TPM1-210ENST00000558264 AATFQ9NY61 560 aaKnown RBP eCLIP12.3□□□□□ -0.44
TPM1-210ENST00000558264 GNAT2P19087 354 aa12.3□□□□□ -0.44
TPM1-210ENST00000558264 MARCKSP29966 332 aaPredicted RBP12.3□□□□□ -0.44
TPM1-210ENST00000558264 HSPA1LP34931 641 aa12.3□□□□□ -0.44
TPM1-210ENST00000558264 IARSP41252 1262 aaKnown RBP12.3□□□□□ -0.44
TPM1-210ENST00000558264 GNL2Q13823 731 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms