RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 EVI5O60447 810 aa9.72□□□□□ -0.85
SPG11-209ENST00000558253 GPTP24298 496 aa9.72□□□□□ -0.85
SPG11-209ENST00000558253 IGHMBP2P38935 993 aaKnown RBP9.72□□□□□ -0.85
SPG11-209ENST00000558253 RCAN1P53805 252 aa9.72□□□□□ -0.85
SPG11-209ENST00000558253 APOBRQ0VD83 1088 aa9.72□□□□□ -0.85
SPG11-209ENST00000558253 KIAA2012Q0VF49 1180 aa9.72□□□□□ -0.85
SPG11-209ENST00000558253 PPP2R5BQ15173 497 aa9.72□□□□□ -0.85
SPG11-209ENST00000558253 SLC9C2Q5TAH2 1124 aa9.72□□□□□ -0.85
SPG11-209ENST00000558253 CCDC102BQ68D86 513 aa9.72□□□□□ -0.85
SPG11-209ENST00000558253 INTS5Q6P9B9 1019 aaKnown RBP9.72□□□□□ -0.85
SPG11-209ENST00000558253 SASS6Q6UVJ0 657 aa9.72□□□□□ -0.85
SPG11-209ENST00000558253 RNF214Q8ND24 703 aa9.72□□□□□ -0.85
SPG11-209ENST00000558253 KCNG4Q8TDN1 519 aa9.72□□□□□ -0.85
SPG11-209ENST00000558253 SLC4A9Q96Q91 983 aa9.72□□□□□ -0.85
SPG11-209ENST00000558253 NACAP1Q9BZK3 213 aa9.72□□□□□ -0.85
SPG11-209ENST00000558253 GNL3LQ9NVN8 582 aaKnown RBP9.72□□□□□ -0.85
SPG11-209ENST00000558253 LHX6Q9UPM6 363 aa9.72□□□□□ -0.85
SPG11-209ENST00000558253 ITGB4P16144 1822 aa9.71□□□□□ -0.85
SPG11-209ENST00000558253 LOC102724428A0A0B4J2F2 783 aa9.71□□□□□ -0.86
SPG11-209ENST00000558253 DPYSL4O14531 572 aa9.71□□□□□ -0.86
SPG11-209ENST00000558253 JAK2O60674 1132 aa9.71□□□□□ -0.86
SPG11-209ENST00000558253 YEATS4O95619 227 aa9.71□□□□□ -0.86
SPG11-209ENST00000558253 PCP11498 1178 aaKnown RBP9.71□□□□□ -0.86
SPG11-209ENST00000558253 LIFRP42702 1097 aa9.71□□□□□ -0.86
SPG11-209ENST00000558253 MCAMP43121 646 aa9.71□□□□□ -0.86
SPG11-209ENST00000558253 SIK1P57059 783 aa9.71□□□□□ -0.86
SPG11-209ENST00000558253 DHX8Q14562 1220 aaKnown RBP9.71□□□□□ -0.86
SPG11-209ENST00000558253 HSP90AA2PQ14568 343 aaPredicted RBP9.71□□□□□ -0.86
SPG11-209ENST00000558253 CCDC73Q6ZRK6 1079 aa9.71□□□□□ -0.86
SPG11-209ENST00000558253 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.71□□□□□ -0.86
SPG11-209ENST00000558253 FERMT3Q86UX7 667 aa9.71□□□□□ -0.86
SPG11-209ENST00000558253 SPATA5Q8NB90 893 aa9.71□□□□□ -0.86
SPG11-209ENST00000558253 BICD2Q8TD16 824 aa9.71□□□□□ -0.86
SPG11-209ENST00000558253 WASF1Q92558 559 aa9.71□□□□□ -0.86
SPG11-209ENST00000558253 SYTL4Q96C24 671 aaPredicted RBP9.71□□□□□ -0.86
SPG11-209ENST00000558253 KRT23Q9C075 422 aa9.71□□□□□ -0.86
SPG11-209ENST00000558253 RTEL1Q9NZ71 1219 aa9.71□□□□□ -0.86
SPG11-209ENST00000558253 ANGEL1Q9UNK9 670 aaKnown RBP9.71□□□□□ -0.86
SPG11-209ENST00000558253 CCDC9Q9Y3X0 531 aaKnown RBP9.71□□□□□ -0.86
SPG11-209ENST00000558253 SPATA31A5Q5VU36 1347 aa9.71□□□□□ -0.86
SPG11-209ENST00000558253 PNPLA7Q6ZV29 1317 aa9.71□□□□□ -0.86
SPG11-209ENST00000558253 SPATA31A7Q8IWB4 1347 aa9.71□□□□□ -0.86
SPG11-209ENST00000558253 LRP5O75197 1615 aa9.71□□□□□ -0.86
SPG11-209ENST00000558253 ANKRD36CQ5JPF3 1778 aa9.7□□□□□ -0.86
SPG11-209ENST00000558253 CAMTA2O94983 1202 aa9.7□□□□□ -0.86
SPG11-209ENST00000558253 CTDNEP1O95476 244 aa9.7□□□□□ -0.86
SPG11-209ENST00000558253 HCLS1P14317 486 aaPredicted RBP9.7□□□□□ -0.86
SPG11-209ENST00000558253 PDE6AP16499 860 aa9.7□□□□□ -0.86
SPG11-209ENST00000558253 ADD1P35611 737 aaKnown RBP9.7□□□□□ -0.86
SPG11-209ENST00000558253 ATP6V1AP38606 617 aa9.7□□□□□ -0.86
SPG11-209ENST00000558253 CRKLP46109 303 aaKnown RBP9.7□□□□□ -0.86
SPG11-209ENST00000558253 TYRO3Q06418 890 aa9.7□□□□□ -0.86
SPG11-209ENST00000558253 SCARF1Q14162 830 aa9.7□□□□□ -0.86
SPG11-209ENST00000558253 SART3Q15020 963 aaKnown RBP9.7□□□□□ -0.86
SPG11-209ENST00000558253 GIMAP6Q6P9H5 292 aa9.7□□□□□ -0.86
SPG11-209ENST00000558253 SGMS1Q86VZ5 419 aa9.7□□□□□ -0.86
SPG11-209ENST00000558253 FBXO18Q8NFZ0 1043 aa9.7□□□□□ -0.86
SPG11-209ENST00000558253 AIDAQ96BJ3 306 aa9.7□□□□□ -0.86
SPG11-209ENST00000558253 DDX11Q96FC9 970 aa9.7□□□□□ -0.86
SPG11-209ENST00000558253 C8orf76Q96K31 380 aa9.7□□□□□ -0.86
SPG11-209ENST00000558253 STRBPQ96SI9 672 aaKnown RBP9.7□□□□□ -0.86
SPG11-209ENST00000558253 NAT10Q9H0A0 1025 aaKnown RBP9.7□□□□□ -0.86
SPG11-209ENST00000558253 PUS7LQ9H0K6 701 aaKnown RBP9.7□□□□□ -0.86
SPG11-209ENST00000558253 RNF41Q9H4P4 317 aaPredicted RBP9.7□□□□□ -0.86
SPG11-209ENST00000558253 DACT1Q9NYF0 836 aa9.7□□□□□ -0.86
SPG11-209ENST00000558253 TFIP11Q9UBB9 837 aaKnown RBP9.7□□□□□ -0.86
SPG11-209ENST00000558253 ZNF831Q5JPB2 1677 aa9.7□□□□□ -0.86
SPG11-209ENST00000558253 KLF18A0A0U1RQI7 1052 aa9.69□□□□□ -0.86
SPG11-209ENST00000558253 CCDC196A0A1B0GTZ2 297 aa9.69□□□□□ -0.86
SPG11-209ENST00000558253 TCRBV5S4A2TA0A5A2 114 aa9.69□□□□□ -0.86
SPG11-209ENST00000558253 PSDA5PKW4 1024 aaPredicted RBP9.69□□□□□ -0.86
SPG11-209ENST00000558253 SEMA3EO15041 775 aa9.69□□□□□ -0.86
SPG11-209ENST00000558253 FOXP2O15409 715 aa9.69□□□□□ -0.86
SPG11-209ENST00000558253 ADCY5O95622 1261 aa9.69□□□□□ -0.86
SPG11-209ENST00000558253 HMGB2P26583 209 aaKnown RBP9.69□□□□□ -0.86
SPG11-209ENST00000558253 FAM160A1Q05DH4 1040 aa9.69□□□□□ -0.86
SPG11-209ENST00000558253 COL16A1Q07092 1604 aaPredicted RBP9.69□□□□□ -0.86
SPG11-209ENST00000558253 UBE4AQ14139 1066 aa9.69□□□□□ -0.86
SPG11-209ENST00000558253 SF3B3Q15393 1217 aaKnown RBP9.69□□□□□ -0.86
SPG11-209ENST00000558253 SLC10A5Q5PT55 438 aa9.69□□□□□ -0.86
SPG11-209ENST00000558253 SUSD4Q5VX71 490 aa9.69□□□□□ -0.86
SPG11-209ENST00000558253 ADALQ6DHV7 355 aa9.69□□□□□ -0.86
SPG11-209ENST00000558253 SYNE3Q6ZMZ3 975 aa9.69□□□□□ -0.86
SPG11-209ENST00000558253 UBN2Q6ZU65 1347 aa9.69□□□□□ -0.86
SPG11-209ENST00000558253 JMYQ8N9B5 988 aa9.69□□□□□ -0.86
SPG11-209ENST00000558253 RREB1Q92766 1687 aa9.69□□□□□ -0.86
SPG11-209ENST00000558253 ARHGEF1Q92888 912 aaKnown RBP9.69□□□□□ -0.86
SPG11-209ENST00000558253 NAP1L5Q96NT1 182 aaPredicted RBP9.69□□□□□ -0.86
SPG11-209ENST00000558253 NOL10Q9BSC4 688 aaKnown RBP9.69□□□□□ -0.86
SPG11-209ENST00000558253 ZNF532Q9HCE3 1301 aa9.69□□□□□ -0.86
SPG11-209ENST00000558253 POLR3EQ9NVU0 708 aa9.69□□□□□ -0.86
SPG11-209ENST00000558253 ORC3Q9UBD5 711 aaPredicted RBP9.69□□□□□ -0.86
SPG11-209ENST00000558253 ROBO1Q9Y6N7 1651 aa9.69□□□□□ -0.86
SPG11-209ENST00000558253 WNK3Q9BYP7 1800 aa9.68□□□□□ -0.86
SPG11-209ENST00000558253 NID2Q14112 1375 aa9.68□□□□□ -0.86
SPG11-209ENST00000558253 PDS5AQ29RF7 1337 aaKnown RBP9.68□□□□□ -0.86
SPG11-209ENST00000558253 STK36Q9NRP7 1315 aa9.68□□□□□ -0.86
SPG11-209ENST00000558253 SPDYE16A6NNV3 312 aaPredicted RBP9.68□□□□□ -0.86
SPG11-209ENST00000558253 GOLGA8BA8MQT2 603 aa9.68□□□□□ -0.86
SPG11-209ENST00000558253 TOM1O60784 492 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms