RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 MCM7P33993 719 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 LONP2Q86WA8 852 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 SMC1BQ8NDV3 1235 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 SNRNP27Q8WVK2 155 aaKnown RBP4.13□□□□□ -1.75
ATXN3-248ENST00000558190 KIAA1468Q9P260 1216 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 CTNNA2P26232 953 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 SPAG1Q07617 926 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 PTPN21Q16825 1174 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 CCDC93Q567U6 631 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 PRR16Q569H4 304 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 ANKRD20A3Q5VUR7 823 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 ADALQ6DHV7 355 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 NUP58Q9BVL2 599 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 BICDL2A1A5D9 508 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 TMED1Q13445 227 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 NBPF10Q6P3W6 841 aaKnown RBP4.13□□□□□ -1.75
ATXN3-248ENST00000558190 MAP3K7O43318 606 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 DNAJC8O75937 253 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-248ENST00000558190 CCDC13Q8IYE1 715 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 CABP4P57796 275 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 TCERG1LQ5VWI1 586 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 ANKRD44Q8N8A2 993 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 ARHGAP6O43182 974 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 RWDD2BP57060 319 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 DYNC1I2Q13409 638 aaKnown RBP4.12□□□□□ -1.75
ATXN3-248ENST00000558190 PLS1Q14651 629 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 TAB2Q9NYJ8 693 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 ZDHHC9Q9Y397 364 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 MYL6BP14649 208 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 SCP2P22307 547 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 KRI1Q8N9T8 703 aaKnown RBP4.12□□□□□ -1.75
ATXN3-248ENST00000558190 DIAPH2O60879 1101 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 MKNK2Q9HBH9 465 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 MTUS1Q9ULD2 1270 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 TTC36A6NLP5 189 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 CFLARO15519 480 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 FAM204AQ9H8W3 233 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 MCUR1Q96AQ8 359 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 NOL3O60936 208 aaKnown RBP4.12□□□□□ -1.75
ATXN3-248ENST00000558190 LUC7L3O95232 432 aaKnown RBP4.12□□□□□ -1.75
ATXN3-248ENST00000558190 ESRRGP62508 458 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 CATIPQ7Z7H3 387 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 KLHL23Q8NBE8 558 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 LRRC31Q6UY01 552 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 DESI2Q9BSY9 194 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 NBPF3Q9H094 633 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 TTF2Q9UNY4 1162 aaKnown RBP4.12□□□□□ -1.75
ATXN3-248ENST00000558190 CCT8L1PA6NM43 557 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 SUN1O94901 812 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 RNF113AO15541 343 aaKnown RBP4.12□□□□□ -1.75
ATXN3-248ENST00000558190 SRGAP2O75044 1071 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 hCG_2014768A0A024R1R8 64 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 CORO7P57737 925 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 NAIF1Q69YI7 327 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-248ENST00000558190 CALR3Q96L12 384 aaKnown RBP4.12□□□□□ -1.75
ATXN3-248ENST00000558190 GPIHBP1Q8IV16 184 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 SH3BGRP55822 239 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-248ENST00000558190 PIP4K2CQ8TBX8 421 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 USP6NLQ92738 828 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 NOC4LQ9BVI4 516 aaKnown RBP4.12□□□□□ -1.75
ATXN3-248ENST00000558190 ATP5J2-PTCD1G3V325 749 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 PTCD1O75127 700 aaKnown RBP4.12□□□□□ -1.75
ATXN3-248ENST00000558190 LRRC27Q9C0I9 530 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 VCX3BQ9H321 246 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 VCX3AQ9NNX9 186 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 PPP1R9AQ9ULJ8 1098 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 PSDA5PKW4 1024 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-248ENST00000558190 EEF2P13639 858 aaKnown RBP4.12□□□□□ -1.75
ATXN3-248ENST00000558190 NUF2Q9BZD4 464 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 GUCY2DQ02846 1103 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 MFSD4BQ5TF39 518 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 SPATA1Q5VX52 437 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 AIDAQ96BJ3 306 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 DYDC2Q96IM9 177 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 SESN3P58005 492 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 CALCOCO2Q13137 446 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 RBM8AQ9Y5S9 174 aaKnown RBP4.12□□□□□ -1.75
ATXN3-248ENST00000558190 SNX14Q9Y5W7 946 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 RPGRIP1LQ68CZ1 1315 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 NR1I2O75469 434 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 ZNF710Q8N1W2 664 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 UIMC1Q96RL1 719 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 SERTAD1Q9UHV2 236 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 TPCN1Q9ULQ1 816 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 MTMR6Q9Y217 621 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 CCDC194A0A1B0GVG4 234 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 KLHL29Q96CT2 875 aa4.12□□□□□ -1.75
ATXN3-248ENST00000558190 MTRF1LQ9UGC7 380 aaKnown RBP4.12□□□□□ -1.75
ATXN3-248ENST00000558190 ENC1O14682 589 aa4.11□□□□□ -1.75
ATXN3-248ENST00000558190 R3HDM2Q9Y2K5 976 aaKnown RBP4.11□□□□□ -1.75
ATXN3-248ENST00000558190 RASSF7Q02833 373 aa4.11□□□□□ -1.75
ATXN3-248ENST00000558190 MUM1Q2TAK8 710 aa4.11□□□□□ -1.75
ATXN3-248ENST00000558190 KRT71Q3SY84 523 aa4.11□□□□□ -1.75
ATXN3-248ENST00000558190 CC2D1AQ6P1N0 951 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-248ENST00000558190 PAF1Q8N7H5 531 aa4.11□□□□□ -1.75
ATXN3-248ENST00000558190 HVCN1Q96D96 273 aa4.11□□□□□ -1.75
ATXN3-248ENST00000558190 ZRANB1Q9UGI0 708 aa4.11□□□□□ -1.75
ATXN3-248ENST00000558190 ME3Q16798 604 aa4.11□□□□□ -1.75
ATXN3-248ENST00000558190 CROCCP2Q86T23 111 aa4.11□□□□□ -1.75
ATXN3-248ENST00000558190 NCOA7Q8NI08 942 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms