RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 DBNDD2Q9BQY9 259 aa17.26■□□□□ 0.35
SLIRP-207ENST00000556831 RHPN1Q8TCX5 695 aa17.25■□□□□ 0.35
SLIRP-207ENST00000556831 CCDC8Q9H0W5 538 aaPredicted RBP17.25■□□□□ 0.35
SLIRP-207ENST00000556831 TLR7Q9NYK1 1049 aaKnown RBP17.25■□□□□ 0.35
SLIRP-207ENST00000556831 TCP10L2B9ZVM9 353 aa17.24■□□□□ 0.35
SLIRP-207ENST00000556831 PPP1R12BO60237 982 aaPredicted RBP17.24■□□□□ 0.35
SLIRP-207ENST00000556831 IFIT2P09913 472 aaKnown RBP17.24■□□□□ 0.35
SLIRP-207ENST00000556831 ZNF157P51786 506 aaPredicted RBP17.24■□□□□ 0.35
SLIRP-207ENST00000556831 GSTO1P78417 241 aa17.24■□□□□ 0.35
SLIRP-207ENST00000556831 RASA3Q14644 834 aa17.24■□□□□ 0.35
SLIRP-207ENST00000556831 NBPF12Q5TAG4 269 aaPredicted RBP17.24■□□□□ 0.35
SLIRP-207ENST00000556831 RGMBQ6NW40 437 aa17.24■□□□□ 0.35
SLIRP-207ENST00000556831 IL1RAPL2Q9NP60 686 aa17.24■□□□□ 0.35
SLIRP-207ENST00000556831 RAI14Q9P0K7 980 aa17.24■□□□□ 0.35
SLIRP-207ENST00000556831 HMG20BQ9P0W2 317 aa17.24■□□□□ 0.35
SLIRP-207ENST00000556831 LRP2BPQ9P2M1 347 aa17.24■□□□□ 0.35
SLIRP-207ENST00000556831 TSKSQ9UJT2 592 aa17.24■□□□□ 0.35
SLIRP-207ENST00000556831 APOBEC3HQ6NTF7 200 aaKnown RBP17.23■□□□□ 0.35
SLIRP-207ENST00000556831 CCDC102AQ96A19 550 aa17.23■□□□□ 0.35
SLIRP-207ENST00000556831 NOL10Q9BSC4 688 aaKnown RBP17.23■□□□□ 0.35
SLIRP-207ENST00000556831 DBNLQ9UJU6 430 aaKnown RBP17.23■□□□□ 0.35
SLIRP-207ENST00000556831 OTOFQ9HC10 1997 aa17.22■□□□□ 0.35
SLIRP-207ENST00000556831 LDHCP07864 332 aa17.22■□□□□ 0.35
SLIRP-207ENST00000556831 MCAMP43121 646 aa17.22■□□□□ 0.35
SLIRP-207ENST00000556831 NOGQ13253 232 aa17.22■□□□□ 0.35
SLIRP-207ENST00000556831 HABP4Q5JVS0 413 aaKnown RBP17.22■□□□□ 0.35
SLIRP-207ENST00000556831 RASAL3Q86YV0 1011 aa17.22■□□□□ 0.35
SLIRP-207ENST00000556831 ZNF384Q8TF68 577 aa17.22■□□□□ 0.35
SLIRP-207ENST00000556831 EAF2Q96CJ1 260 aaPredicted RBP17.22■□□□□ 0.35
SLIRP-207ENST00000556831 HOOK2Q96ED9 719 aa17.22■□□□□ 0.35
SLIRP-207ENST00000556831 TEPSINQ96N21 525 aa17.22■□□□□ 0.35
SLIRP-207ENST00000556831 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.22■□□□□ 0.35
SLIRP-207ENST00000556831 DAGLAQ9Y4D2 1042 aa17.22■□□□□ 0.35
SLIRP-207ENST00000556831 MYO5AQ9Y4I1 1855 aaKnown RBP17.22■□□□□ 0.35
SLIRP-207ENST00000556831 AKAP11Q9UKA4 1901 aa17.21■□□□□ 0.35
SLIRP-207ENST00000556831 MAP2K2P36507 400 aa17.21■□□□□ 0.35
SLIRP-207ENST00000556831 TBC1D9Q6ZT07 1266 aa17.21■□□□□ 0.35
SLIRP-207ENST00000556831 ZNF512BQ96KM6 892 aaPredicted RBP17.21■□□□□ 0.35
SLIRP-207ENST00000556831 LRRCC1Q9C099 1032 aa17.21■□□□□ 0.35
SLIRP-207ENST00000556831 TMEM39BQ9GZU3 492 aa17.21■□□□□ 0.35
SLIRP-207ENST00000556831 SNRKQ9NRH2 765 aa17.21■□□□□ 0.35
SLIRP-207ENST00000556831 ANGEL1Q9UNK9 670 aaKnown RBP17.21■□□□□ 0.35
SLIRP-207ENST00000556831 MYH2Q9UKX2 1941 aa17.2■□□□□ 0.34
SLIRP-207ENST00000556831 CA12O43570 354 aa17.2■□□□□ 0.34
SLIRP-207ENST00000556831 SLC10A3P09131 477 aa17.2■□□□□ 0.34
SLIRP-207ENST00000556831 IREB2P48200 963 aaKnown RBP17.2■□□□□ 0.34
SLIRP-207ENST00000556831 MKRN3Q13064 507 aaKnown RBP17.2■□□□□ 0.34
SLIRP-207ENST00000556831 FKBP1CQ5VVH2 108 aa17.2■□□□□ 0.34
SLIRP-207ENST00000556831 CLMNQ96JQ2 1002 aa17.2■□□□□ 0.34
SLIRP-207ENST00000556831 CRBNQ96SW2 442 aa17.2■□□□□ 0.34
SLIRP-207ENST00000556831 ZBTB47Q9UFB7 747 aaPredicted RBP17.2■□□□□ 0.34
SLIRP-207ENST00000556831 MAST2Q6P0Q8 1798 aa17.2■□□□□ 0.34
SLIRP-207ENST00000556831 MROH7-TTC4A0A0A0MT08 1334 aa17.2■□□□□ 0.34
SLIRP-207ENST00000556831 KIF23Q02241 960 aaPredicted RBP17.19■□□□□ 0.34
SLIRP-207ENST00000556831 MECOMQ03112 1051 aa17.19■□□□□ 0.34
SLIRP-207ENST00000556831 FAM83AQ86UY5 434 aa17.19■□□□□ 0.34
SLIRP-207ENST00000556831 USP40Q9NVE5 1235 aa17.19■□□□□ 0.34
SLIRP-207ENST00000556831 BTDP43251 543 aa17.18■□□□□ 0.34
SLIRP-207ENST00000556831 NFIAQ12857 509 aa17.18■□□□□ 0.34
SLIRP-207ENST00000556831 GPATCH3Q96I76 525 aa17.18■□□□□ 0.34
SLIRP-207ENST00000556831 NDUFB9Q9Y6M9 179 aa17.18■□□□□ 0.34
SLIRP-207ENST00000556831 GAKO14976 1311 aa17.18■□□□□ 0.34
SLIRP-207ENST00000556831 CUL9Q8IWT3 2517 aa17.17■□□□□ 0.34
SLIRP-207ENST00000556831 IGSF3O75054 1194 aa17.17■□□□□ 0.34
SLIRP-207ENST00000556831 SLURP2P0DP57 97 aa17.17■□□□□ 0.34
SLIRP-207ENST00000556831 ZAP70P43403 619 aa17.17■□□□□ 0.34
SLIRP-207ENST00000556831 DGKZQ13574 1117 aa17.17■□□□□ 0.34
SLIRP-207ENST00000556831 AAMPQ13685 434 aa17.17■□□□□ 0.34
SLIRP-207ENST00000556831 DCAF15Q66K64 600 aa17.17■□□□□ 0.34
SLIRP-207ENST00000556831 NAA16Q6N069 864 aaPredicted RBP17.17■□□□□ 0.34
SLIRP-207ENST00000556831 CDC42EP5Q6NZY7 148 aa17.17■□□□□ 0.34
SLIRP-207ENST00000556831 ZFPM1Q8IX07 1006 aa17.17■□□□□ 0.34
SLIRP-207ENST00000556831 RPAP1Q9BWH6 1393 aaPredicted RBP17.16■□□□□ 0.34
SLIRP-207ENST00000556831 USP2O75604 605 aaPredicted RBP17.16■□□□□ 0.34
SLIRP-207ENST00000556831 IDH1O75874 414 aaKnown RBP17.16■□□□□ 0.34
SLIRP-207ENST00000556831 BAG3O95817 575 aa17.16■□□□□ 0.34
SLIRP-207ENST00000556831 TCP10Q12799 353 aa17.16■□□□□ 0.34
SLIRP-207ENST00000556831 TTF1Q15361 905 aaPredicted RBP17.16■□□□□ 0.34
SLIRP-207ENST00000556831 LDLRAD1Q5T700 205 aa17.16■□□□□ 0.34
SLIRP-207ENST00000556831 NSUN4Q96CB9 384 aaKnown RBP17.16■□□□□ 0.34
SLIRP-207ENST00000556831 FAM163AQ96GL9 167 aaPredicted RBP17.16■□□□□ 0.34
SLIRP-207ENST00000556831 UNCXA6NJT0 531 aa17.15■□□□□ 0.34
SLIRP-207ENST00000556831 MAP4K4O95819 1239 aaPredicted RBP17.15■□□□□ 0.34
SLIRP-207ENST00000556831 CYP2E1P05181 493 aaPredicted RBP17.15■□□□□ 0.34
SLIRP-207ENST00000556831 MAP3K12Q12852 859 aa17.15■□□□□ 0.34
SLIRP-207ENST00000556831 ZSCAN29Q8IWY8 852 aaPredicted RBP17.15■□□□□ 0.34
SLIRP-207ENST00000556831 REM2Q8IYK8 340 aaPredicted RBP17.15■□□□□ 0.34
SLIRP-207ENST00000556831 ANKRD13AQ8IZ07 590 aa17.15■□□□□ 0.34
SLIRP-207ENST00000556831 FAM151AQ8WW52 585 aa17.15■□□□□ 0.34
SLIRP-207ENST00000556831 SLC10A4Q96EP9 437 aa17.15■□□□□ 0.34
SLIRP-207ENST00000556831 CSRNP1Q96S65 589 aa17.15■□□□□ 0.34
SLIRP-207ENST00000556831 FAM198AQ9UFP1 575 aa17.15■□□□□ 0.34
SLIRP-207ENST00000556831 AK9Q5TCS8 1911 aa17.14■□□□□ 0.33
SLIRP-207ENST00000556831 PLCG2P16885 1265 aa17.14■□□□□ 0.33
SLIRP-207ENST00000556831 GJA5P36382 358 aa17.14■□□□□ 0.33
SLIRP-207ENST00000556831 SOX10P56693 466 aa17.14■□□□□ 0.33
SLIRP-207ENST00000556831 PICALMQ13492 652 aa17.14■□□□□ 0.33
SLIRP-207ENST00000556831 CNKSR2Q8WXI2 1034 aa17.14■□□□□ 0.33
SLIRP-207ENST00000556831 DNAJC2Q99543 621 aaKnown RBP17.14■□□□□ 0.33
SLIRP-207ENST00000556831 DCTPP1Q9H773 170 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms